RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 TSHZ3Q63HK5 1081 aa18.41■□□□□ 0.54
PCDH17-202ENST00000484979 NF2P35240 595 aa18.41■□□□□ 0.54
PCDH17-202ENST00000484979 MRPL50Q8N5N7 158 aaKnown RBP18.41■□□□□ 0.54
PCDH17-202ENST00000484979 LRRC27Q9C0I9 530 aa18.41■□□□□ 0.54
PCDH17-202ENST00000484979 KLF18A0A0U1RQI7 1052 aa18.4■□□□□ 0.54
PCDH17-202ENST00000484979 CCDC150Q8NCX0 1101 aa18.4■□□□□ 0.54
PCDH17-202ENST00000484979 SAMM50Q9Y512 469 aa18.4■□□□□ 0.54
PCDH17-202ENST00000484979 RBM25P49756 843 aaKnown RBP18.4■□□□□ 0.54
PCDH17-202ENST00000484979 KANK3Q6NY19 840 aa18.4■□□□□ 0.54
PCDH17-202ENST00000484979 CCDC148Q8NFR7 591 aa18.4■□□□□ 0.54
PCDH17-202ENST00000484979 ANKRD2Q9GZV1 360 aa18.4■□□□□ 0.54
PCDH17-202ENST00000484979 TFIP11Q9UBB9 837 aaKnown RBP18.4■□□□□ 0.54
PCDH17-202ENST00000484979 ITSN2Q9NZM3 1697 aa18.4■□□□□ 0.54
PCDH17-202ENST00000484979 CCDC144CPQ8IYA2 1237 aa18.39■□□□□ 0.54
PCDH17-202ENST00000484979 F8W031 263 aaPredicted RBP18.39■□□□□ 0.53
PCDH17-202ENST00000484979 KIF2AO00139 706 aaPredicted RBP18.39■□□□□ 0.53
PCDH17-202ENST00000484979 NUCB1Q02818 461 aa18.39■□□□□ 0.53
PCDH17-202ENST00000484979 RBM27Q9P2N5 1060 aaKnown RBP18.39■□□□□ 0.53
PCDH17-202ENST00000484979 VAMP4O75379 141 aa18.39■□□□□ 0.53
PCDH17-202ENST00000484979 SDSP20132 328 aa18.39■□□□□ 0.53
PCDH17-202ENST00000484979 ZSCAN16Q9H4T2 348 aaPredicted RBP18.39■□□□□ 0.53
PCDH17-202ENST00000484979 RNMTO43148 476 aaKnown RBP18.39■□□□□ 0.53
PCDH17-202ENST00000484979 GJB2P29033 226 aa18.39■□□□□ 0.53
PCDH17-202ENST00000484979 IFIT1BQ5T764 474 aaKnown RBP18.39■□□□□ 0.53
PCDH17-202ENST00000484979 YTHDC2Q9H6S0 1430 aaKnown RBP18.39■□□□□ 0.53
PCDH17-202ENST00000484979 GNAT2P19087 354 aa18.38■□□□□ 0.53
PCDH17-202ENST00000484979 TRAPPC3LQ5T215 181 aa18.38■□□□□ 0.53
PCDH17-202ENST00000484979 ZFYVE9O95405 1425 aa18.38■□□□□ 0.53
PCDH17-202ENST00000484979 UHRF1BP1Q6BDS2 1440 aa18.38■□□□□ 0.53
PCDH17-202ENST00000484979 CCDC102BQ68D86 513 aa18.38■□□□□ 0.53
PCDH17-202ENST00000484979 ERMNQ8TAM6 284 aa18.38■□□□□ 0.53
PCDH17-202ENST00000484979 TBC1D2Q9BYX2 928 aa18.38■□□□□ 0.53
PCDH17-202ENST00000484979 TOP1P11387 765 aaKnown RBP18.37■□□□□ 0.53
PCDH17-202ENST00000484979 ANAPC15P60006 121 aa18.37■□□□□ 0.53
PCDH17-202ENST00000484979 PARP10Q53GL7 1025 aa18.37■□□□□ 0.53
PCDH17-202ENST00000484979 TMEM87AQ8NBN3 555 aa18.37■□□□□ 0.53
PCDH17-202ENST00000484979 LARP6Q9BRS8 491 aaKnown RBP18.37■□□□□ 0.53
PCDH17-202ENST00000484979 BABAM1Q9NWV8 329 aa18.37■□□□□ 0.53
PCDH17-202ENST00000484979 H0YHG0 523 aa18.37■□□□□ 0.53
PCDH17-202ENST00000484979 B4DLN1 442 aa18.37■□□□□ 0.53
PCDH17-202ENST00000484979 ZSCAN12O43309 604 aa18.37■□□□□ 0.53
PCDH17-202ENST00000484979 MRPL12P52815 198 aaKnown RBP18.37■□□□□ 0.53
PCDH17-202ENST00000484979 CLEC11AQ9Y240 323 aa18.37■□□□□ 0.53
PCDH17-202ENST00000484979 RBM8AQ9Y5S9 174 aaKnown RBP18.37■□□□□ 0.53
PCDH17-202ENST00000484979 GNPATO15228 680 aa18.36■□□□□ 0.53
PCDH17-202ENST00000484979 RTN1Q16799 776 aa18.36■□□□□ 0.53
PCDH17-202ENST00000484979 TTC41PQ6P2S7 1318 aa18.36■□□□□ 0.53
PCDH17-202ENST00000484979 TCERG1LQ5VWI1 586 aa18.36■□□□□ 0.53
PCDH17-202ENST00000484979 TRMT1LQ7Z2T5 733 aaKnown RBP18.36■□□□□ 0.53
PCDH17-202ENST00000484979 SH3TC1Q8TE82 1336 aa18.36■□□□□ 0.53
PCDH17-202ENST00000484979 CAVIN2O95810 425 aa18.36■□□□□ 0.53
PCDH17-202ENST00000484979 MTIF2P46199 727 aaKnown RBP18.36■□□□□ 0.53
PCDH17-202ENST00000484979 CCDC191Q8NCU4 936 aa18.36■□□□□ 0.53
PCDH17-202ENST00000484979 ORAI2Q96SN7 254 aa18.36■□□□□ 0.53
PCDH17-202ENST00000484979 PAG1Q9NWQ8 432 aa18.36■□□□□ 0.53
PCDH17-202ENST00000484979 EIF3JO75822 258 aaKnown RBP18.35■□□□□ 0.53
PCDH17-202ENST00000484979 SLC4A8Q2Y0W8 1093 aa18.35■□□□□ 0.53
PCDH17-202ENST00000484979 PHACTR3Q96KR7 559 aa18.35■□□□□ 0.53
PCDH17-202ENST00000484979 ABCC1P33527 1531 aa18.35■□□□□ 0.53
PCDH17-202ENST00000484979 CWF19L2Q2TBE0 894 aaKnown RBP18.35■□□□□ 0.53
PCDH17-202ENST00000484979 PCDHB15Q9Y5E8 787 aa18.35■□□□□ 0.53
PCDH17-202ENST00000484979 IGHDP01880 384 aa18.35■□□□□ 0.53
PCDH17-202ENST00000484979 A0A1W2PP64 1363 aa18.35■□□□□ 0.53
PCDH17-202ENST00000484979 PARD3Q8TEW0 1356 aa18.35■□□□□ 0.53
PCDH17-202ENST00000484979 HOXB7P09629 217 aa18.35■□□□□ 0.53
PCDH17-202ENST00000484979 CCDC40Q4G0X9 1142 aa18.35■□□□□ 0.53
PCDH17-202ENST00000484979 ZNF790Q6PG37 636 aa18.34■□□□□ 0.53
PCDH17-202ENST00000484979 CARD14Q9BXL6 1004 aa18.34■□□□□ 0.53
PCDH17-202ENST00000484979 TDRD12Q587J7 1177 aaKnown RBP18.34■□□□□ 0.53
PCDH17-202ENST00000484979 HELBQ8NG08 1087 aaPredicted RBP18.34■□□□□ 0.53
PCDH17-202ENST00000484979 CWC15Q9P013 229 aaKnown RBP18.34■□□□□ 0.53
PCDH17-202ENST00000484979 PA2G4Q9UQ80 394 aaKnown RBP18.34■□□□□ 0.53
PCDH17-202ENST00000484979 MAGEB6P1A0A0J9YX57 407 aa18.34■□□□□ 0.53
PCDH17-202ENST00000484979 SSFA2P28290 1259 aa18.34■□□□□ 0.53
PCDH17-202ENST00000484979 SKAP1Q86WV1 359 aa18.34■□□□□ 0.53
PCDH17-202ENST00000484979 SYCP3Q8IZU3 236 aa18.34■□□□□ 0.53
PCDH17-202ENST00000484979 STK32BQ9NY57 414 aa18.34■□□□□ 0.53
PCDH17-202ENST00000484979 ATP10AO60312 1499 aa18.34■□□□□ 0.53
PCDH17-202ENST00000484979 USO1O60763 962 aaKnown RBP18.33■□□□□ 0.53
PCDH17-202ENST00000484979 CNBD1Q8NA66 436 aa18.33■□□□□ 0.53
PCDH17-202ENST00000484979 UBXN4Q92575 508 aa18.33■□□□□ 0.53
PCDH17-202ENST00000484979 PANK2Q9BZ23 570 aa18.33■□□□□ 0.53
PCDH17-202ENST00000484979 VEZTQ9HBM0 779 aa18.33■□□□□ 0.53
PCDH17-202ENST00000484979 CCNL1Q9UK58 526 aaPredicted RBP18.33■□□□□ 0.53
PCDH17-202ENST00000484979 PICALMQ13492 652 aa18.33■□□□□ 0.53
PCDH17-202ENST00000484979 RAB11FIP4Q86YS3 637 aa18.33■□□□□ 0.53
PCDH17-202ENST00000484979 CKAP2LQ8IYA6 745 aa18.33■□□□□ 0.53
PCDH17-202ENST00000484979 ESYT1Q9BSJ8 1104 aa18.33■□□□□ 0.53
PCDH17-202ENST00000484979 ANKRD62A6NC57 917 aa18.33■□□□□ 0.52
PCDH17-202ENST00000484979 TBCAO75347 108 aaKnown RBP18.33■□□□□ 0.52
PCDH17-202ENST00000484979 LDHBP07195 334 aaKnown RBP18.33■□□□□ 0.52
PCDH17-202ENST00000484979 LIG1P18858 919 aa18.33■□□□□ 0.52
PCDH17-202ENST00000484979 ALG1Q9BT22 464 aa18.33■□□□□ 0.52
PCDH17-202ENST00000484979 CALM1P0DP23 149 aa18.33■□□□□ 0.52
PCDH17-202ENST00000484979 CALM2P0DP24 149 aa18.33■□□□□ 0.52
PCDH17-202ENST00000484979 CALM3P0DP25 149 aa18.33■□□□□ 0.52
PCDH17-202ENST00000484979 DCTPP1Q9H773 170 aa18.33■□□□□ 0.52
PCDH17-202ENST00000484979 FAM114A1Q8IWE2 563 aa18.32■□□□□ 0.52
PCDH17-202ENST00000484979 TSPYL1Q9H0U9 437 aa18.32■□□□□ 0.52
PCDH17-202ENST00000484979 MCM9Q9NXL9 1143 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms