RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 KDM3BQ7LBC6 1761 aa20.19■□□□□ 0.82
HLA-DQB1-208ENST00000484729 SUPT20HQ8NEM7 779 aa20.19■□□□□ 0.82
HLA-DQB1-208ENST00000484729 RTFDC1Q9BY42 306 aaPredicted RBP20.19■□□□□ 0.82
HLA-DQB1-208ENST00000484729 DPP8Q6V1X1 898 aaPredicted RBP20.18■□□□□ 0.82
HLA-DQB1-208ENST00000484729 PNNQ9H307 717 aaKnown RBP20.18■□□□□ 0.82
HLA-DQB1-208ENST00000484729 CDC37L1Q7L3B6 337 aa20.17■□□□□ 0.82
HLA-DQB1-208ENST00000484729 USP48Q86UV5 1035 aa20.17■□□□□ 0.82
HLA-DQB1-208ENST00000484729 MPNDQ8N594 471 aa20.17■□□□□ 0.82
HLA-DQB1-208ENST00000484729 UTP14AQ9BVJ6 771 aaKnown RBP20.17■□□□□ 0.82
HLA-DQB1-208ENST00000484729 CNOT7Q9UIV1 285 aaKnown RBP20.17■□□□□ 0.82
HLA-DQB1-208ENST00000484729 KIAA2012Q0VF49 1180 aa20.16■□□□□ 0.82
HLA-DQB1-208ENST00000484729 PARP10Q53GL7 1025 aa20.16■□□□□ 0.82
HLA-DQB1-208ENST00000484729 SLC10A5Q5PT55 438 aa20.16■□□□□ 0.82
HLA-DQB1-208ENST00000484729 ZC3H15Q8WU90 426 aaKnown RBP20.16■□□□□ 0.82
HLA-DQB1-208ENST00000484729 YDJCA8MPS7 323 aa20.15■□□□□ 0.82
HLA-DQB1-208ENST00000484729 HCLS1P14317 486 aaPredicted RBP20.15■□□□□ 0.82
HLA-DQB1-208ENST00000484729 HUNKP57058 714 aa20.15■□□□□ 0.82
HLA-DQB1-208ENST00000484729 NOGQ13253 232 aa20.15■□□□□ 0.82
HLA-DQB1-208ENST00000484729 TNIP1Q15025 636 aa20.15■□□□□ 0.82
HLA-DQB1-208ENST00000484729 SP8Q8IXZ3 490 aa20.15■□□□□ 0.82
HLA-DQB1-208ENST00000484729 PCDH10Q9P2E7 1040 aa20.15■□□□□ 0.82
HLA-DQB1-208ENST00000484729 DLG5Q8TDM6 1919 aa20.15■□□□□ 0.82
HLA-DQB1-208ENST00000484729 CDHR2Q9BYE9 1310 aa20.14■□□□□ 0.81
HLA-DQB1-208ENST00000484729 BBOX1O75936 387 aa20.14■□□□□ 0.81
HLA-DQB1-208ENST00000484729 ZBTB12Q9Y330 459 aaPredicted RBP20.14■□□□□ 0.81
HLA-DQB1-208ENST00000484729 ANXA1P04083 346 aa20.13■□□□□ 0.81
HLA-DQB1-208ENST00000484729 RALBP1Q15311 655 aa20.13■□□□□ 0.81
HLA-DQB1-208ENST00000484729 LRP10Q7Z4F1 713 aa20.13■□□□□ 0.81
HLA-DQB1-208ENST00000484729 MICALL2Q8IY33 904 aa20.13■□□□□ 0.81
HLA-DQB1-208ENST00000484729 H7C1D1 291 aa20.12■□□□□ 0.81
HLA-DQB1-208ENST00000484729 EIF2S2P20042 333 aaKnown RBP20.12■□□□□ 0.81
HLA-DQB1-208ENST00000484729 PDIA6Q15084 440 aa20.12■□□□□ 0.81
HLA-DQB1-208ENST00000484729 PROSER3Q2NL68 480 aa20.12■□□□□ 0.81
HLA-DQB1-208ENST00000484729 SAMD7Q7Z3H4 446 aa20.12■□□□□ 0.81
HLA-DQB1-208ENST00000484729 ZNF428Q96B54 188 aa20.12■□□□□ 0.81
HLA-DQB1-208ENST00000484729 LAMB2P55268 1798 aa20.11■□□□□ 0.81
HLA-DQB1-208ENST00000484729 ERBB4Q15303 1308 aa20.11■□□□□ 0.81
HLA-DQB1-208ENST00000484729 SOX10P56693 466 aa20.11■□□□□ 0.81
HLA-DQB1-208ENST00000484729 TSPYL4Q9UJ04 414 aa20.11■□□□□ 0.81
HLA-DQB1-208ENST00000484729 PDE4DIPQ5VU43 2346 aa20.11■□□□□ 0.81
HLA-DQB1-208ENST00000484729 FAM155AB1AL88 458 aaPredicted RBP20.1■□□□□ 0.81
HLA-DQB1-208ENST00000484729 EGFRP00533 1210 aa20.1■□□□□ 0.81
HLA-DQB1-208ENST00000484729 TBC1D10BQ4KMP7 808 aaPredicted RBP20.1■□□□□ 0.81
HLA-DQB1-208ENST00000484729 RGMBQ6NW40 437 aa20.1■□□□□ 0.81
HLA-DQB1-208ENST00000484729 DDX46Q7L014 1031 aaKnown RBP20.1■□□□□ 0.81
HLA-DQB1-208ENST00000484729 TAF1P21675 1872 aa20.09■□□□□ 0.81
HLA-DQB1-208ENST00000484729 RIPK4P57078 832 aa20.09■□□□□ 0.81
HLA-DQB1-208ENST00000484729 GRAPQ13588 217 aa20.09■□□□□ 0.81
HLA-DQB1-208ENST00000484729 KRT26Q7Z3Y9 468 aa20.09■□□□□ 0.81
HLA-DQB1-208ENST00000484729 NLRP10Q86W26 655 aa20.09■□□□□ 0.81
HLA-DQB1-208ENST00000484729 GRAPLQ8TC17 118 aaPredicted RBP20.09■□□□□ 0.81
HLA-DQB1-208ENST00000484729 DUOX1Q9NRD9 1551 aa20.08■□□□□ 0.81
HLA-DQB1-208ENST00000484729 ADM5C9JUS6 153 aa20.08■□□□□ 0.81
HLA-DQB1-208ENST00000484729 PSMD14O00487 310 aa20.08■□□□□ 0.81
HLA-DQB1-208ENST00000484729 KIF23Q02241 960 aaPredicted RBP20.08■□□□□ 0.81
HLA-DQB1-208ENST00000484729 AIMP1Q12904 312 aaKnown RBP20.08■□□□□ 0.81
HLA-DQB1-208ENST00000484729 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.81
HLA-DQB1-208ENST00000484729 RBM26Q5T8P6 1007 aaKnown RBP20.08■□□□□ 0.81
HLA-DQB1-208ENST00000484729 NECTIN2Q92692 538 aa20.08■□□□□ 0.81
HLA-DQB1-208ENST00000484729 GBA2Q9HCG7 927 aaPredicted RBP20.08■□□□□ 0.81
HLA-DQB1-208ENST00000484729 TRMT112Q9UI30 125 aaKnown RBP20.08■□□□□ 0.81
HLA-DQB1-208ENST00000484729 TRPA1O75762 1119 aa20.07■□□□□ 0.8
HLA-DQB1-208ENST00000484729 DBNDD1Q9H9R9 158 aa20.07■□□□□ 0.8
HLA-DQB1-208ENST00000484729 ANKRD36CQ5JPF3 1778 aa20.07■□□□□ 0.8
HLA-DQB1-208ENST00000484729 MYBBP1AQ9BQG0 1328 aaKnown RBP20.06■□□□□ 0.8
HLA-DQB1-208ENST00000484729 RIMBP2O15034 1052 aa20.06■□□□□ 0.8
HLA-DQB1-208ENST00000484729 ZNF157P51786 506 aaPredicted RBP20.06■□□□□ 0.8
HLA-DQB1-208ENST00000484729 LMOD3Q0VAK6 560 aa20.06■□□□□ 0.8
HLA-DQB1-208ENST00000484729 COPS6Q7L5N1 327 aa20.06■□□□□ 0.8
HLA-DQB1-208ENST00000484729 C2orf69Q8N8R5 385 aa20.06■□□□□ 0.8
HLA-DQB1-208ENST00000484729 DPF2Q92785 391 aa20.06■□□□□ 0.8
HLA-DQB1-208ENST00000484729 KCNQ5Q9NR82 932 aa20.06■□□□□ 0.8
HLA-DQB1-208ENST00000484729 RNF186Q9NXI6 227 aa20.06■□□□□ 0.8
HLA-DQB1-208ENST00000484729 TMPOP42166 694 aaKnown RBP20.05■□□□□ 0.8
HLA-DQB1-208ENST00000484729 WASHC4Q2M389 1173 aa20.05■□□□□ 0.8
HLA-DQB1-208ENST00000484729 XAGE3Q8WTP9 111 aa20.05■□□□□ 0.8
HLA-DQB1-208ENST00000484729 CCDC102AQ96A19 550 aa20.05■□□□□ 0.8
HLA-DQB1-208ENST00000484729 SAGE1Q9NXZ1 904 aa20.05■□□□□ 0.8
HLA-DQB1-208ENST00000484729 SH3TC1Q8TE82 1336 aa20.04■□□□□ 0.8
HLA-DQB1-208ENST00000484729 CCDC146Q8IYE0 955 aa20.04■□□□□ 0.8
HLA-DQB1-208ENST00000484729 DCPSQ96C86 337 aaKnown RBP20.04■□□□□ 0.8
HLA-DQB1-208ENST00000484729 NSFL1CQ9UNZ2 370 aaKnown RBP20.04■□□□□ 0.8
HLA-DQB1-208ENST00000484729 POLR2AP24928 1970 aaKnown RBP20.04■□□□□ 0.8
HLA-DQB1-208ENST00000484729 TCIRG1Q13488 830 aa20.03■□□□□ 0.8
HLA-DQB1-208ENST00000484729 NEUROD2Q15784 382 aa20.03■□□□□ 0.8
HLA-DQB1-208ENST00000484729 DOK7Q18PE1 504 aa20.03■□□□□ 0.8
HLA-DQB1-208ENST00000484729 HSP90AB3PQ58FF7 597 aa20.03■□□□□ 0.8
HLA-DQB1-208ENST00000484729 C6orf229H3BNL8 230 aa20.02■□□□□ 0.8
HLA-DQB1-208ENST00000484729 CELF1Q92879 486 aaKnown RBP20.02■□□□□ 0.8
HLA-DQB1-208ENST00000484729 CSRNP1Q96S65 589 aa20.02■□□□□ 0.8
HLA-DQB1-208ENST00000484729 POLLQ9UGP5 575 aa20.02■□□□□ 0.8
HLA-DQB1-208ENST00000484729 ASTN2O75129 1339 aaPredicted RBP20.02■□□□□ 0.79
HLA-DQB1-208ENST00000484729 RTL9Q8NET4 1388 aa20.01■□□□□ 0.79
HLA-DQB1-208ENST00000484729 ECE2O60344 883 aa20.01■□□□□ 0.79
HLA-DQB1-208ENST00000484729 GPSM2P81274 684 aa20.01■□□□□ 0.79
HLA-DQB1-208ENST00000484729 WDR43Q15061 677 aaKnown RBP eCLIP20.01■□□□□ 0.79
HLA-DQB1-208ENST00000484729 TMC4Q7Z404 712 aa20.01■□□□□ 0.79
HLA-DQB1-208ENST00000484729 BABAM1Q9NWV8 329 aa20.01■□□□□ 0.79
HLA-DQB1-208ENST00000484729 LRRC37AA6NMS7 1700 aa20.01■□□□□ 0.79
HLA-DQB1-208ENST00000484729 COL4A1P02462 1669 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms