RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 USP17L20D6RJB6 530 aa7.5□□□□□ -1.21
VPS13A-211ENST00000484581 E9PSI1 815 aa7.5□□□□□ -1.21
VPS13A-211ENST00000484581 C21orf2O43822 256 aa7.5□□□□□ -1.21
VPS13A-211ENST00000484581 USP17L24Q0WX57 530 aa7.5□□□□□ -1.21
VPS13A-211ENST00000484581 CCER1Q8TC90 406 aaPredicted RBP7.5□□□□□ -1.21
VPS13A-211ENST00000484581 PNMA5Q96PV4 448 aa7.5□□□□□ -1.21
VPS13A-211ENST00000484581 EFCC1Q9HA90 598 aa7.5□□□□□ -1.21
VPS13A-211ENST00000484581 DKK1O94907 266 aa7.49□□□□□ -1.21
VPS13A-211ENST00000484581 COL9A3Q14050 684 aaPredicted RBP7.49□□□□□ -1.21
VPS13A-211ENST00000484581 RSPO4Q2I0M5 234 aaPredicted RBP7.49□□□□□ -1.21
VPS13A-211ENST00000484581 TXNDC2Q86VQ3 553 aa7.49□□□□□ -1.21
VPS13A-211ENST00000484581 NID1P14543 1247 aa7.48□□□□□ -1.21
VPS13A-211ENST00000484581 GRIK4Q16099 956 aa7.48□□□□□ -1.21
VPS13A-211ENST00000484581 C20orf204Q6ZNR8 217 aa7.48□□□□□ -1.21
VPS13A-211ENST00000484581 C9orf172C9J069 976 aa7.47□□□□□ -1.21
VPS13A-211ENST00000484581 TPSG1Q9NRR2 321 aa7.47□□□□□ -1.21
VPS13A-211ENST00000484581 SLC6A14Q9UN76 642 aa7.47□□□□□ -1.21
VPS13A-211ENST00000484581 RAC1P63000 192 aa7.46□□□□□ -1.22
VPS13A-211ENST00000484581 RTN1Q16799 776 aa7.46□□□□□ -1.22
VPS13A-211ENST00000484581 CRTC2Q53ET0 693 aaPredicted RBP7.46□□□□□ -1.22
VPS13A-211ENST00000484581 NKAPLQ5M9Q1 402 aa7.46□□□□□ -1.22
VPS13A-211ENST00000484581 PHLDB3Q6NSJ2 640 aa7.46□□□□□ -1.22
VPS13A-211ENST00000484581 NUDT8Q8WV74 236 aa7.46□□□□□ -1.22
VPS13A-211ENST00000484581 GSX2Q9BZM3 304 aa7.46□□□□□ -1.22
VPS13A-211ENST00000484581 JPH1Q9HDC5 661 aaPredicted RBP7.46□□□□□ -1.22
VPS13A-211ENST00000484581 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.46□□□□□ -1.22
VPS13A-211ENST00000484581 EPB42P16452 691 aa7.45□□□□□ -1.22
VPS13A-211ENST00000484581 SSFA2P28290 1259 aa7.45□□□□□ -1.22
VPS13A-211ENST00000484581 DPYDQ12882 1025 aa7.45□□□□□ -1.22
VPS13A-211ENST00000484581 PTK7Q13308 1070 aa7.45□□□□□ -1.22
VPS13A-211ENST00000484581 CCINQ13939 588 aa7.45□□□□□ -1.22
VPS13A-211ENST00000484581 ARTNQ5T4W7 220 aa7.45□□□□□ -1.22
VPS13A-211ENST00000484581 IER5Q5VY09 327 aa7.45□□□□□ -1.22
VPS13A-211ENST00000484581 CLP1Q92989 425 aaKnown RBP7.45□□□□□ -1.22
VPS13A-211ENST00000484581 ZFP64Q9NPA5 681 aa7.45□□□□□ -1.22
VPS13A-211ENST00000484581 A0A0A0MRY4 1105 aa7.44□□□□□ -1.22
VPS13A-211ENST00000484581 TGFBR3LH3BV60 316 aa7.44□□□□□ -1.22
VPS13A-211ENST00000484581 LGR5O75473 907 aa7.44□□□□□ -1.22
VPS13A-211ENST00000484581 RGS9O75916 674 aaPredicted RBP7.44□□□□□ -1.22
VPS13A-211ENST00000484581 ELNP15502 786 aa7.44□□□□□ -1.22
VPS13A-211ENST00000484581 ARID4AP29374 1257 aaPredicted RBP7.44□□□□□ -1.22
VPS13A-211ENST00000484581 KRTAP9-9Q9BYP9 154 aa7.44□□□□□ -1.22
VPS13A-211ENST00000484581 KRTAP9-4Q9BYQ2 154 aa7.44□□□□□ -1.22
VPS13A-211ENST00000484581 DNAJB12Q9NXW2 375 aaKnown RBP7.44□□□□□ -1.22
VPS13A-211ENST00000484581 ERCC3P19447 782 aa7.43□□□□□ -1.22
VPS13A-211ENST00000484581 NFKB1P19838 968 aa7.43□□□□□ -1.22
VPS13A-211ENST00000484581 IGFBP4P22692 258 aa7.43□□□□□ -1.22
VPS13A-211ENST00000484581 FAM69CQ0P6D2 419 aa7.43□□□□□ -1.22
VPS13A-211ENST00000484581 PCSK7Q16549 785 aa7.43□□□□□ -1.22
VPS13A-211ENST00000484581 PSAPL1Q6NUJ1 521 aa7.43□□□□□ -1.22
VPS13A-211ENST00000484581 FAM200AQ8TCP9 573 aa7.43□□□□□ -1.22
VPS13A-211ENST00000484581 VTI1AQ96AJ9 217 aa7.43□□□□□ -1.22
VPS13A-211ENST00000484581 DYRK3O43781 588 aa7.42□□□□□ -1.22
VPS13A-211ENST00000484581 NRG1Q02297 640 aaPredicted RBP7.42□□□□□ -1.22
VPS13A-211ENST00000484581 SWI5Q1ZZU3 235 aa7.42□□□□□ -1.22
VPS13A-211ENST00000484581 ANKMY2Q8IV38 441 aa7.42□□□□□ -1.22
VPS13A-211ENST00000484581 SLAIN2Q9P270 581 aa7.42□□□□□ -1.22
VPS13A-211ENST00000484581 BTBD11A6QL63 1104 aa7.41□□□□□ -1.22
VPS13A-211ENST00000484581 AFF1P51825 1210 aaKnown RBP7.41□□□□□ -1.22
VPS13A-211ENST00000484581 FAM35AQ86V20 835 aa7.41□□□□□ -1.22
VPS13A-211ENST00000484581 DMRTC2Q8IXT2 367 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-211ENST00000484581 LENG1Q96BZ8 264 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-211ENST00000484581 KLK14Q9P0G3 267 aa7.41□□□□□ -1.22
VPS13A-211ENST00000484581 RBM47A0AV96 593 aaKnown RBP7.4□□□□□ -1.22
VPS13A-211ENST00000484581 SELPP16109 830 aa7.4□□□□□ -1.22
VPS13A-211ENST00000484581 IDH3AP50213 366 aa7.4□□□□□ -1.22
VPS13A-211ENST00000484581 ADGRE1Q14246 886 aa7.4□□□□□ -1.22
VPS13A-211ENST00000484581 TXNRD3Q86VQ6 643 aa7.4□□□□□ -1.22
VPS13A-211ENST00000484581 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.4□□□□□ -1.221e-6■■■■■ 101.9
VPS13A-211ENST00000484581 DMGDHQ9UI17 866 aaKnown RBP7.4□□□□□ -1.22
VPS13A-211ENST00000484581 USP21Q9UK80 565 aa7.4□□□□□ -1.22
VPS13A-211ENST00000484581 BCS1LQ9Y276 419 aa7.4□□□□□ -1.22
VPS13A-211ENST00000484581 SOWAHDA6NJG2 315 aa7.39□□□□□ -1.23
VPS13A-211ENST00000484581 MAP3K6O95382 1288 aa7.39□□□□□ -1.23
VPS13A-211ENST00000484581 CPB1P15086 417 aa7.39□□□□□ -1.23
VPS13A-211ENST00000484581 ATP2B4P23634 1241 aa7.39□□□□□ -1.23
VPS13A-211ENST00000484581 INPP5BP32019 993 aa7.39□□□□□ -1.23
VPS13A-211ENST00000484581 MBTPS1Q14703 1052 aa7.39□□□□□ -1.23
VPS13A-211ENST00000484581 KRT25Q7Z3Z0 450 aa7.39□□□□□ -1.23
VPS13A-211ENST00000484581 NBPF11Q86T75 865 aa7.39□□□□□ -1.23
VPS13A-211ENST00000484581 KRTAP19-1Q8IUB9 90 aa7.39□□□□□ -1.23
VPS13A-211ENST00000484581 MICAL2O94851 1124 aa7.38□□□□□ -1.23
VPS13A-211ENST00000484581 ARSDP51689 593 aa7.38□□□□□ -1.23
VPS13A-211ENST00000484581 DGKZQ13574 1117 aa7.38□□□□□ -1.23
VPS13A-211ENST00000484581 PRSS36Q5K4E3 855 aa7.38□□□□□ -1.23
VPS13A-211ENST00000484581 ELMSAN1Q6PJG2 1045 aa7.38□□□□□ -1.23
VPS13A-211ENST00000484581 SHISA2Q6UWI4 295 aa7.38□□□□□ -1.23
VPS13A-211ENST00000484581 DNAJC14Q6Y2X3 702 aaPredicted RBP7.38□□□□□ -1.23
VPS13A-211ENST00000484581 FMR1NBQ8N0W7 255 aaPredicted RBP7.38□□□□□ -1.23
VPS13A-211ENST00000484581 C11orf16Q9NQ32 467 aa7.38□□□□□ -1.23
VPS13A-211ENST00000484581 H2AFB1P0C5Y9 115 aa7.37□□□□□ -1.23
VPS13A-211ENST00000484581 H2AFB2P0C5Z0 115 aa7.37□□□□□ -1.23
VPS13A-211ENST00000484581 C11orf91Q3C1V1 193 aa7.37□□□□□ -1.23
VPS13A-211ENST00000484581 MSL1Q68DK7 614 aa7.37□□□□□ -1.23
VPS13A-211ENST00000484581 DHX32Q7L7V1 743 aaKnown RBP7.37□□□□□ -1.23
VPS13A-211ENST00000484581 NAGPAQ9UK23 515 aa7.37□□□□□ -1.23
VPS13A-211ENST00000484581 UNCXA6NJT0 531 aa7.36□□□□□ -1.23
VPS13A-211ENST00000484581 FOXO3O43524 673 aa7.36□□□□□ -1.23
VPS13A-211ENST00000484581 SASH3O75995 380 aa7.36□□□□□ -1.23
VPS13A-211ENST00000484581 RARAP10276 462 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms