RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 SASH3O75995 380 aa9.62□□□□□ -0.87
SCAF11-207ENST00000484275 SELPP16109 830 aa9.62□□□□□ -0.87
SCAF11-207ENST00000484275 PLAURQ03405 335 aa9.62□□□□□ -0.87
SCAF11-207ENST00000484275 RSPO4Q2I0M5 234 aaPredicted RBP9.62□□□□□ -0.87
SCAF11-207ENST00000484275 ACIN1Q9UKV3 1341 aaKnown RBP9.61□□□□□ -0.87
SCAF11-207ENST00000484275 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.61□□□□□ -0.87
SCAF11-207ENST00000484275 CPB1P15086 417 aa9.61□□□□□ -0.87
SCAF11-207ENST00000484275 GRIK5Q16478 980 aa9.61□□□□□ -0.87
SCAF11-207ENST00000484275 NKAPLQ5M9Q1 402 aa9.61□□□□□ -0.87
SCAF11-207ENST00000484275 DHX32Q7L7V1 743 aaKnown RBP9.61□□□□□ -0.87
SCAF11-207ENST00000484275 FAM35AQ86V20 835 aa9.61□□□□□ -0.87
SCAF11-207ENST00000484275 LPIN3Q9BQK8 851 aa9.61□□□□□ -0.87
SCAF11-207ENST00000484275 SAP130Q9H0E3 1048 aa9.61□□□□□ -0.87
SCAF11-207ENST00000484275 RTCBQ9Y3I0 505 aaKnown RBP9.61□□□□□ -0.87
SCAF11-207ENST00000484275 MLLT1Q03111 559 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-207ENST00000484275 ELOAQ14241 798 aaKnown RBP9.6□□□□□ -0.87
SCAF11-207ENST00000484275 SWI5Q1ZZU3 235 aa9.6□□□□□ -0.87
SCAF11-207ENST00000484275 PERM1Q5SV97 790 aa9.6□□□□□ -0.87
SCAF11-207ENST00000484275 SHISA2Q6UWI4 295 aa9.6□□□□□ -0.87
SCAF11-207ENST00000484275 CAPN12Q6ZSI9 719 aa9.6□□□□□ -0.87
SCAF11-207ENST00000484275 TREML1Q86YW5 311 aa9.6□□□□□ -0.87
SCAF11-207ENST00000484275 TRPM4Q8TD43 1214 aa9.6□□□□□ -0.87
SCAF11-207ENST00000484275 RGS9O75916 674 aaPredicted RBP9.59□□□□□ -0.87
SCAF11-207ENST00000484275 RARAP10276 462 aa9.59□□□□□ -0.87
SCAF11-207ENST00000484275 FAM26DQ5JW98 314 aa9.59□□□□□ -0.87
SCAF11-207ENST00000484275 C11orf16Q9NQ32 467 aa9.59□□□□□ -0.87
SCAF11-207ENST00000484275 ELNP15502 786 aa9.58□□□□□ -0.88
SCAF11-207ENST00000484275 ETFBKMTQ8IXQ9 262 aa9.58□□□□□ -0.88
SCAF11-207ENST00000484275 DMRTC2Q8IXT2 367 aaPredicted RBP9.58□□□□□ -0.88
SCAF11-207ENST00000484275 RGL4Q8IZJ4 473 aa9.58□□□□□ -0.88
SCAF11-207ENST00000484275 NACC1Q96RE7 527 aa9.58□□□□□ -0.88
SCAF11-207ENST00000484275 EGFRP00533 1210 aa9.57□□□□□ -0.88
SCAF11-207ENST00000484275 GPLD1P80108 840 aa9.57□□□□□ -0.88
SCAF11-207ENST00000484275 ADGRE1Q14246 886 aa9.57□□□□□ -0.88
SCAF11-207ENST00000484275 MBTPS1Q14703 1052 aa9.57□□□□□ -0.88
SCAF11-207ENST00000484275 FMR1NBQ8N0W7 255 aaPredicted RBP9.57□□□□□ -0.88
SCAF11-207ENST00000484275 KCNMB2Q9Y691 235 aa9.57□□□□□ -0.88
SCAF11-207ENST00000484275 XYLBO75191 536 aa9.56□□□□□ -0.88
SCAF11-207ENST00000484275 HFE2Q6ZVN8 426 aa9.56□□□□□ -0.88
SCAF11-207ENST00000484275 CMTR1Q8N1G2 835 aaKnown RBP9.56□□□□□ -0.88
SCAF11-207ENST00000484275 Q8N3U1 123 aa9.56□□□□□ -0.88
SCAF11-207ENST00000484275 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.56□□□□□ -0.88
SCAF11-207ENST00000484275 FRRS1LQ9P0K9 344 aa9.56□□□□□ -0.88
SCAF11-207ENST00000484275 C9orf172C9J069 976 aa9.55□□□□□ -0.88
SCAF11-207ENST00000484275 RAC1P63000 192 aa9.55□□□□□ -0.88
SCAF11-207ENST00000484275 PCSK7Q16549 785 aa9.55□□□□□ -0.88
SCAF11-207ENST00000484275 TMEM164Q5U3C3 297 aa9.55□□□□□ -0.88
SCAF11-207ENST00000484275 MSL1Q68DK7 614 aa9.55□□□□□ -0.88
SCAF11-207ENST00000484275 LENG1Q96BZ8 264 aaPredicted RBP9.55□□□□□ -0.88
SCAF11-207ENST00000484275 TNFRSF10BO14763 440 aa9.54□□□□□ -0.88
SCAF11-207ENST00000484275 ATG7O95352 703 aa9.54□□□□□ -0.88
SCAF11-207ENST00000484275 ELMSAN1Q6PJG2 1045 aa9.54□□□□□ -0.88
SCAF11-207ENST00000484275 MKNK1Q9BUB5 465 aa9.54□□□□□ -0.88
SCAF11-207ENST00000484275 TLR7Q9NYK1 1049 aaKnown RBP9.54□□□□□ -0.88
SCAF11-207ENST00000484275 CXXC1Q9P0U4 656 aaPredicted RBP9.54□□□□□ -0.88
SCAF11-207ENST00000484275 SLAIN2Q9P270 581 aa9.54□□□□□ -0.88
SCAF11-207ENST00000484275 DYRK3O43781 588 aa9.53□□□□□ -0.88
SCAF11-207ENST00000484275 NRLP54845 237 aa9.53□□□□□ -0.88
SCAF11-207ENST00000484275 TRIP4Q15650 581 aaPredicted RBP9.53□□□□□ -0.88
SCAF11-207ENST00000484275 C16orf46Q6P387 395 aa9.53□□□□□ -0.88
SCAF11-207ENST00000484275 J3QW42 95 aa9.52□□□□□ -0.89
SCAF11-207ENST00000484275 MMP20O60882 483 aa9.52□□□□□ -0.89
SCAF11-207ENST00000484275 FOXD4L6Q3SYB3 417 aaPredicted RBP9.52□□□□□ -0.89
SCAF11-207ENST00000484275 FOXD4L3Q6VB84 417 aaPredicted RBP9.52□□□□□ -0.89
SCAF11-207ENST00000484275 TTC9Q92623 222 aa9.52□□□□□ -0.89
SCAF11-207ENST00000484275 ZMYND15Q9H091 742 aa9.52□□□□□ -0.89
SCAF11-207ENST00000484275 SMG9Q9H0W8 520 aaKnown RBP9.52□□□□□ -0.89
SCAF11-207ENST00000484275 NAA30Q147X3 362 aaPredicted RBP9.51□□□□□ -0.89
SCAF11-207ENST00000484275 TXNRD3Q86VQ6 643 aa9.51□□□□□ -0.89
SCAF11-207ENST00000484275 COL26A1Q96A83 441 aa9.51□□□□□ -0.89
SCAF11-207ENST00000484275 EIF2AK2P19525 551 aaKnown RBP9.5□□□□□ -0.89
SCAF11-207ENST00000484275 BRD2P25440 801 aaKnown RBP9.5□□□□□ -0.89
SCAF11-207ENST00000484275 FBXO11Q86XK2 927 aa9.5□□□□□ -0.89
SCAF11-207ENST00000484275 DEAF1O75398 565 aaPredicted RBP9.49□□□□□ -0.89
SCAF11-207ENST00000484275 WFDC8Q8IUA0 241 aa9.49□□□□□ -0.89
SCAF11-207ENST00000484275 NSUN5Q96P11 429 aaKnown RBP9.49□□□□□ -0.89
SCAF11-207ENST00000484275 LOC102724428A0A0B4J2F2 783 aa9.48□□□□□ -0.89
SCAF11-207ENST00000484275 SIK1P57059 783 aa9.48□□□□□ -0.89
SCAF11-207ENST00000484275 NRG1Q02297 640 aaPredicted RBP9.48□□□□□ -0.89
SCAF11-207ENST00000484275 ZMYM1Q5SVZ6 1142 aa9.48□□□□□ -0.89
SCAF11-207ENST00000484275 DTWD1Q8N5C7 304 aa9.48□□□□□ -0.89
SCAF11-207ENST00000484275 CLP1Q92989 425 aaKnown RBP9.48□□□□□ -0.89
SCAF11-207ENST00000484275 PLD4Q96BZ4 506 aa9.48□□□□□ -0.89
SCAF11-207ENST00000484275 SSBP4Q9BWG4 385 aaPredicted RBP9.48□□□□□ -0.89
SCAF11-207ENST00000484275 USP21Q9UK80 565 aa9.48□□□□□ -0.89
SCAF11-207ENST00000484275 ZBTB39O15060 712 aa9.47□□□□□ -0.89
SCAF11-207ENST00000484275 PSAPP07602 524 aa9.47□□□□□ -0.89
SCAF11-207ENST00000484275 HOXD8P13378 290 aaPredicted RBP9.47□□□□□ -0.89
SCAF11-207ENST00000484275 ARID4AP29374 1257 aaPredicted RBP9.46□□□□□ -0.9
SCAF11-207ENST00000484275 SOX18P35713 384 aa9.46□□□□□ -0.9
SCAF11-207ENST00000484275 PRSS36Q5K4E3 855 aa9.46□□□□□ -0.9
SCAF11-207ENST00000484275 NLRP13Q86W25 1043 aa9.46□□□□□ -0.9
SCAF11-207ENST00000484275 PBXIP1Q96AQ6 731 aa9.46□□□□□ -0.9
SCAF11-207ENST00000484275 COL13A1Q5TAT6 717 aaPredicted RBP9.45□□□□□ -0.9
SCAF11-207ENST00000484275 ARID3CA6NKF2 412 aa9.44□□□□□ -0.9
SCAF11-207ENST00000484275 UBAP1LF5GYI3 381 aa9.44□□□□□ -0.9
SCAF11-207ENST00000484275 PTCD1O75127 700 aaKnown RBP9.44□□□□□ -0.9
SCAF11-207ENST00000484275 GDF6Q6KF10 455 aaPredicted RBP9.44□□□□□ -0.9
SCAF11-207ENST00000484275 WFDC12Q8WWY7 111 aa9.44□□□□□ -0.9
SCAF11-207ENST00000484275 DLL1O00548 723 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms