RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 EIF2S2P20042 333 aaKnown RBP17.05■□□□□ 0.32
UBR4-213ENST00000483922 KIAA2012Q0VF49 1180 aa17.05■□□□□ 0.32
UBR4-213ENST00000483922 NLRP10Q86W26 655 aa17.05■□□□□ 0.32
UBR4-213ENST00000483922 MPNDQ8N594 471 aa17.05■□□□□ 0.32
UBR4-213ENST00000483922 TAF1P21675 1872 aa17.04■□□□□ 0.32
UBR4-213ENST00000483922 BBOX1O75936 387 aa17.04■□□□□ 0.32
UBR4-213ENST00000483922 CIAPIN1Q6FI81 312 aa17.04■□□□□ 0.32
UBR4-213ENST00000483922 DPP8Q6V1X1 898 aaPredicted RBP17.04■□□□□ 0.32
UBR4-213ENST00000483922 MCOLN1Q9GZU1 580 aa17.04■□□□□ 0.32
UBR4-213ENST00000483922 LAMB2P55268 1798 aa17.04■□□□□ 0.32
UBR4-213ENST00000483922 COL4A1P02462 1669 aa17.04■□□□□ 0.32
UBR4-213ENST00000483922 DUOX1Q9NRD9 1551 aa17.03■□□□□ 0.32
UBR4-213ENST00000483922 COPS6Q7L5N1 327 aa17.03■□□□□ 0.32
UBR4-213ENST00000483922 HHIPL1Q96JK4 782 aa17.03■□□□□ 0.32
UBR4-213ENST00000483922 BEGAINQ9BUH8 593 aa17.03■□□□□ 0.32
UBR4-213ENST00000483922 CNOT7Q9UIV1 285 aaKnown RBP17.03■□□□□ 0.32
UBR4-213ENST00000483922 ZBTB12Q9Y330 459 aaPredicted RBP17.03■□□□□ 0.32
UBR4-213ENST00000483922 EGFRP00533 1210 aa17.02■□□□□ 0.32
UBR4-213ENST00000483922 MLLT1Q03111 559 aaPredicted RBP17.02■□□□□ 0.32
UBR4-213ENST00000483922 USP48Q86UV5 1035 aa17.02■□□□□ 0.32
UBR4-213ENST00000483922 SUPT20HQ8NEM7 779 aa17.02■□□□□ 0.32
UBR4-213ENST00000483922 ZC3H15Q8WU90 426 aaKnown RBP17.02■□□□□ 0.32
UBR4-213ENST00000483922 NECTIN2Q92692 538 aa17.02■□□□□ 0.32
UBR4-213ENST00000483922 KCNQ5Q9NR82 932 aa17.02■□□□□ 0.32
UBR4-213ENST00000483922 TSPYL4Q9UJ04 414 aa17.02■□□□□ 0.32
UBR4-213ENST00000483922 CASP8AP2Q9UKL3 1982 aa17.01■□□□□ 0.31
UBR4-213ENST00000483922 BRPF1P55201 1214 aaPredicted RBP17.01■□□□□ 0.31
UBR4-213ENST00000483922 AIMP1Q12904 312 aaKnown RBP17.01■□□□□ 0.31
UBR4-213ENST00000483922 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
UBR4-213ENST00000483922 CDC37L1Q7L3B6 337 aa17.01■□□□□ 0.31
UBR4-213ENST00000483922 SAMD7Q7Z3H4 446 aa17.01■□□□□ 0.31
UBR4-213ENST00000483922 XAGE3Q8WTP9 111 aa17.01■□□□□ 0.31
UBR4-213ENST00000483922 ZNF408Q9H9D4 720 aa17.01■□□□□ 0.31
UBR4-213ENST00000483922 FAM155AB1AL88 458 aaPredicted RBP17■□□□□ 0.31
UBR4-213ENST00000483922 TCIRG1Q13488 830 aa17■□□□□ 0.31
UBR4-213ENST00000483922 GRAPQ13588 217 aa17■□□□□ 0.31
UBR4-213ENST00000483922 GRAPLQ8TC17 118 aaPredicted RBP17■□□□□ 0.31
UBR4-213ENST00000483922 ANKRD36CQ5JPF3 1778 aa17■□□□□ 0.31
UBR4-213ENST00000483922 TNIP1Q15025 636 aa16.99■□□□□ 0.31
UBR4-213ENST00000483922 BCL2L13Q9BXK5 485 aa16.99■□□□□ 0.31
UBR4-213ENST00000483922 TRMT112Q9UI30 125 aaKnown RBP16.99■□□□□ 0.31
UBR4-213ENST00000483922 CDHR2Q9BYE9 1310 aa16.98■□□□□ 0.31
UBR4-213ENST00000483922 PSMD14O00487 310 aa16.98■□□□□ 0.31
UBR4-213ENST00000483922 RIPK4P57078 832 aa16.98■□□□□ 0.31
UBR4-213ENST00000483922 DDX46Q7L014 1031 aaKnown RBP16.98■□□□□ 0.31
UBR4-213ENST00000483922 MICALL2Q8IY33 904 aa16.98■□□□□ 0.31
UBR4-213ENST00000483922 CELF1Q92879 486 aaKnown RBP16.98■□□□□ 0.31
UBR4-213ENST00000483922 TMX4Q9H1E5 349 aaPredicted RBP16.98■□□□□ 0.31
UBR4-213ENST00000483922 POLLQ9UGP5 575 aa16.98■□□□□ 0.31
UBR4-213ENST00000483922 CA12O43570 354 aa16.97■□□□□ 0.31
UBR4-213ENST00000483922 NEFMP07197 916 aa16.97■□□□□ 0.31
UBR4-213ENST00000483922 DPF2Q92785 391 aa16.97■□□□□ 0.31
UBR4-213ENST00000483922 HUNKP57058 714 aa16.96■□□□□ 0.31
UBR4-213ENST00000483922 GPSM2P81274 684 aa16.96■□□□□ 0.31
UBR4-213ENST00000483922 DGKZQ13574 1117 aa16.96■□□□□ 0.31
UBR4-213ENST00000483922 TBC1D10BQ4KMP7 808 aaPredicted RBP16.96■□□□□ 0.31
UBR4-213ENST00000483922 DBNDD1Q9H9R9 158 aa16.96■□□□□ 0.31
UBR4-213ENST00000483922 SH3TC1Q8TE82 1336 aa16.96■□□□□ 0.3
UBR4-213ENST00000483922 RTL9Q8NET4 1388 aa16.95■□□□□ 0.3
UBR4-213ENST00000483922 ADM5C9JUS6 153 aa16.95■□□□□ 0.3
UBR4-213ENST00000483922 H7C1D1 291 aa16.95■□□□□ 0.3
UBR4-213ENST00000483922 RIMBP2O15034 1052 aa16.95■□□□□ 0.3
UBR4-213ENST00000483922 TMPOP42166 694 aaKnown RBP16.95■□□□□ 0.3
UBR4-213ENST00000483922 HSP90AB3PQ58FF7 597 aa16.95■□□□□ 0.3
UBR4-213ENST00000483922 FAM89AQ96GI7 184 aa16.95■□□□□ 0.3
UBR4-213ENST00000483922 ISCA1Q9BUE6 129 aa16.95■□□□□ 0.3
UBR4-213ENST00000483922 BABAM1Q9NWV8 329 aa16.95■□□□□ 0.3
UBR4-213ENST00000483922 LRRC37AA6NMS7 1700 aa16.95■□□□□ 0.3
UBR4-213ENST00000483922 ASTN2O75129 1339 aaPredicted RBP16.95■□□□□ 0.3
UBR4-213ENST00000483922 DDX60Q8IY21 1712 aaKnown RBP16.94■□□□□ 0.3
UBR4-213ENST00000483922 CHL1O00533 1208 aa16.94■□□□□ 0.3
UBR4-213ENST00000483922 NOGQ13253 232 aa16.94■□□□□ 0.3
UBR4-213ENST00000483922 SF3B3Q15393 1217 aaKnown RBP16.94■□□□□ 0.3
UBR4-213ENST00000483922 DOK7Q18PE1 504 aa16.94■□□□□ 0.3
UBR4-213ENST00000483922 WASHC4Q2M389 1173 aa16.94■□□□□ 0.3
UBR4-213ENST00000483922 NSFL1CQ9UNZ2 370 aaKnown RBP16.94■□□□□ 0.3
UBR4-213ENST00000483922 MAPK8IP3Q9UPT6 1336 aa16.94■□□□□ 0.3
UBR4-213ENST00000483922 POLR2AP24928 1970 aaKnown RBP16.93■□□□□ 0.3
UBR4-213ENST00000483922 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
UBR4-213ENST00000483922 KIF23Q02241 960 aaPredicted RBP16.93■□□□□ 0.3
UBR4-213ENST00000483922 RBM26Q5T8P6 1007 aaKnown RBP16.93■□□□□ 0.3
UBR4-213ENST00000483922 CHPF2Q9P2E5 772 aa16.93■□□□□ 0.3
UBR4-213ENST00000483922 RGMBQ6NW40 437 aa16.92■□□□□ 0.3
UBR4-213ENST00000483922 KRT26Q7Z3Y9 468 aa16.92■□□□□ 0.3
UBR4-213ENST00000483922 CFAP44Q96MT7 982 aa16.92■□□□□ 0.3
UBR4-213ENST00000483922 GBA2Q9HCG7 927 aaPredicted RBP16.92■□□□□ 0.3
UBR4-213ENST00000483922 TRIM35Q9UPQ4 493 aa16.92■□□□□ 0.3
UBR4-213ENST00000483922 PLBD2Q8NHP8 589 aa16.91■□□□□ 0.3
UBR4-213ENST00000483922 TBC1D16Q8TBP0 767 aa16.91■□□□□ 0.3
UBR4-213ENST00000483922 PNNQ9H307 717 aaKnown RBP16.91■□□□□ 0.3
UBR4-213ENST00000483922 RNF186Q9NXI6 227 aa16.91■□□□□ 0.3
UBR4-213ENST00000483922 ECE2O60344 883 aa16.9■□□□□ 0.3
UBR4-213ENST00000483922 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
UBR4-213ENST00000483922 ANKRD13DQ6ZTN6 518 aa16.9■□□□□ 0.3
UBR4-213ENST00000483922 TMC4Q7Z404 712 aa16.9■□□□□ 0.3
UBR4-213ENST00000483922 CSRNP1Q96S65 589 aa16.9■□□□□ 0.3
UBR4-213ENST00000483922 C6orf229H3BNL8 230 aa16.89■□□□□ 0.29
UBR4-213ENST00000483922 TRPA1O75762 1119 aa16.89■□□□□ 0.29
UBR4-213ENST00000483922 VIL1P09327 827 aaKnown RBP16.89■□□□□ 0.29
UBR4-213ENST00000483922 SEC31BQ9NQW1 1179 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms