RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 PTCD1O75127 700 aaKnown RBP7.61□□□□□ -1.19
NSMCE4A-210ENST00000483541 BRD2P25440 801 aaKnown RBP7.61□□□□□ -1.19
NSMCE4A-210ENST00000483541 TRIM28Q13263 835 aaKnown RBP7.61□□□□□ -1.19
NSMCE4A-210ENST00000483541 TMEM164Q5U3C3 297 aa7.61□□□□□ -1.19
NSMCE4A-210ENST00000483541 C16orf46Q6P387 395 aa7.61□□□□□ -1.19
NSMCE4A-210ENST00000483541 TREML1Q86YW5 311 aa7.61□□□□□ -1.19
NSMCE4A-210ENST00000483541 KRTAP4-12Q9BQ66 201 aa7.61□□□□□ -1.19
NSMCE4A-210ENST00000483541 ITGB7P26010 798 aa7.6□□□□□ -1.19
NSMCE4A-210ENST00000483541 ARID4AP29374 1257 aaPredicted RBP7.6□□□□□ -1.19
NSMCE4A-210ENST00000483541 CHRNA4P43681 627 aa7.6□□□□□ -1.19
NSMCE4A-210ENST00000483541 TBC1D8BQ0IIM8 1120 aa7.6□□□□□ -1.19
NSMCE4A-210ENST00000483541 C8orf86Q6ZUL3 223 aa7.6□□□□□ -1.19
NSMCE4A-210ENST00000483541 TRPM4Q8TD43 1214 aa7.6□□□□□ -1.19
NSMCE4A-210ENST00000483541 TARSP26639 723 aaKnown RBP7.59□□□□□ -1.19
NSMCE4A-210ENST00000483541 LCE3BQ5TA77 95 aa7.59□□□□□ -1.19
NSMCE4A-210ENST00000483541 DHX32Q7L7V1 743 aaKnown RBP7.59□□□□□ -1.19
NSMCE4A-210ENST00000483541 FRRS1LQ9P0K9 344 aa7.59□□□□□ -1.19
NSMCE4A-210ENST00000483541 ZFATQ9P243 1243 aa7.59□□□□□ -1.19
NSMCE4A-210ENST00000483541 RGS9O75916 674 aaPredicted RBP7.58□□□□□ -1.2
NSMCE4A-210ENST00000483541 SASH3O75995 380 aa7.58□□□□□ -1.2
NSMCE4A-210ENST00000483541 APBA3O96018 575 aa7.58□□□□□ -1.2
NSMCE4A-210ENST00000483541 TRAPPC3LQ5T215 181 aa7.58□□□□□ -1.2
NSMCE4A-210ENST00000483541 PSAPL1Q6NUJ1 521 aa7.58□□□□□ -1.2
NSMCE4A-210ENST00000483541 TTC9Q92623 222 aa7.58□□□□□ -1.2
NSMCE4A-210ENST00000483541 NACC1Q96RE7 527 aa7.58□□□□□ -1.2
NSMCE4A-210ENST00000483541 SAP130Q9H0E3 1048 aa7.58□□□□□ -1.2
NSMCE4A-210ENST00000483541 JPH1Q9HDC5 661 aaPredicted RBP7.58□□□□□ -1.2
NSMCE4A-210ENST00000483541 FAM13BQ9NYF5 915 aa7.58□□□□□ -1.2
NSMCE4A-210ENST00000483541 XYLBO75191 536 aa7.57□□□□□ -1.2
NSMCE4A-210ENST00000483541 RARAP10276 462 aa7.57□□□□□ -1.2
NSMCE4A-210ENST00000483541 AFF1P51825 1210 aaKnown RBP7.57□□□□□ -1.2
NSMCE4A-210ENST00000483541 NRLP54845 237 aa7.57□□□□□ -1.2
NSMCE4A-210ENST00000483541 GPLD1P80108 840 aa7.57□□□□□ -1.2
NSMCE4A-210ENST00000483541 ILDR2Q71H61 639 aa7.57□□□□□ -1.2
NSMCE4A-210ENST00000483541 FAM35AQ86V20 835 aa7.57□□□□□ -1.2
NSMCE4A-210ENST00000483541 ETFBKMTQ8IXQ9 262 aa7.57□□□□□ -1.2
NSMCE4A-210ENST00000483541 RGL4Q8IZJ4 473 aa7.57□□□□□ -1.2
NSMCE4A-210ENST00000483541 TLR7Q9NYK1 1049 aaKnown RBP7.57□□□□□ -1.2
NSMCE4A-210ENST00000483541 NAGPAQ9UK23 515 aa7.57□□□□□ -1.2
NSMCE4A-210ENST00000483541 ARID3CA6NKF2 412 aa7.56□□□□□ -1.2
NSMCE4A-210ENST00000483541 ZBTB42B2RXF5 422 aa7.56□□□□□ -1.2
NSMCE4A-210ENST00000483541 PPP1R15AO75807 674 aaPredicted RBP7.56□□□□□ -1.2
NSMCE4A-210ENST00000483541 GATA4P43694 442 aa7.56□□□□□ -1.2
NSMCE4A-210ENST00000483541 KRT25Q7Z3Z0 450 aa7.56□□□□□ -1.2
NSMCE4A-210ENST00000483541 CMTR1Q8N1G2 835 aaKnown RBP7.56□□□□□ -1.2
NSMCE4A-210ENST00000483541 NUDT8Q8WV74 236 aa7.56□□□□□ -1.2
NSMCE4A-210ENST00000483541 KCNMB2Q9Y691 235 aa7.56□□□□□ -1.2
NSMCE4A-210ENST00000483541 TNFRSF10BO14763 440 aa7.55□□□□□ -1.2
NSMCE4A-210ENST00000483541 HOXD8P13378 290 aaPredicted RBP7.55□□□□□ -1.2
NSMCE4A-210ENST00000483541 ELNP15502 786 aa7.55□□□□□ -1.2
NSMCE4A-210ENST00000483541 RAC1P63000 192 aa7.55□□□□□ -1.2
NSMCE4A-210ENST00000483541 CAPN12Q6ZSI9 719 aa7.55□□□□□ -1.2
NSMCE4A-210ENST00000483541 PIK3R5Q8WYR1 880 aa7.55□□□□□ -1.2
NSMCE4A-210ENST00000483541 A0A0A0MRY4 1105 aa7.54□□□□□ -1.2
NSMCE4A-210ENST00000483541 CPB1P15086 417 aa7.54□□□□□ -1.2
NSMCE4A-210ENST00000483541 ATP2B4P23634 1241 aa7.54□□□□□ -1.2
NSMCE4A-210ENST00000483541 SOX18P35713 384 aa7.54□□□□□ -1.2
NSMCE4A-210ENST00000483541 PERM1Q5SV97 790 aa7.54□□□□□ -1.2
NSMCE4A-210ENST00000483541 LPIN3Q9BQK8 851 aa7.54□□□□□ -1.2
NSMCE4A-210ENST00000483541 MKNK1Q9BUB5 465 aa7.54□□□□□ -1.2
NSMCE4A-210ENST00000483541 STIM2Q9P246 746 aa7.54□□□□□ -1.2
NSMCE4A-210ENST00000483541 USP20Q9Y2K6 914 aa7.54□□□□□ -1.2
NSMCE4A-210ENST00000483541 C9orf172C9J069 976 aa7.53□□□□□ -1.2
NSMCE4A-210ENST00000483541 FAM229AH3BQW9 127 aa7.53□□□□□ -1.2
NSMCE4A-210ENST00000483541 PSAPP07602 524 aa7.53□□□□□ -1.2
NSMCE4A-210ENST00000483541 PLAURQ03405 335 aa7.53□□□□□ -1.2
NSMCE4A-210ENST00000483541 NAA30Q147X3 362 aaPredicted RBP7.53□□□□□ -1.2
NSMCE4A-210ENST00000483541 ELMSAN1Q6PJG2 1045 aa7.53□□□□□ -1.2
NSMCE4A-210ENST00000483541 DTWD1Q8N5C7 304 aa7.53□□□□□ -1.2
NSMCE4A-210ENST00000483541 GRIK4Q16099 956 aa7.52□□□□□ -1.21
NSMCE4A-210ENST00000483541 GRIK5Q16478 980 aa7.52□□□□□ -1.21
NSMCE4A-210ENST00000483541 ZMYM1Q5SVZ6 1142 aa7.52□□□□□ -1.21
NSMCE4A-210ENST00000483541 MSL1Q68DK7 614 aa7.52□□□□□ -1.21
NSMCE4A-210ENST00000483541 NLRP13Q86W25 1043 aa7.52□□□□□ -1.21
NSMCE4A-210ENST00000483541 ABTB2Q8N961 1025 aa7.52□□□□□ -1.21
NSMCE4A-210ENST00000483541 LENG1Q96BZ8 264 aaPredicted RBP7.52□□□□□ -1.21
NSMCE4A-210ENST00000483541 SLAIN2Q9P270 581 aa7.52□□□□□ -1.21
NSMCE4A-210ENST00000483541 FNDC3AQ9Y2H6 1198 aaKnown RBP7.52□□□□□ -1.21
NSMCE4A-210ENST00000483541 LOC102724428A0A0B4J2F2 783 aa7.51□□□□□ -1.21
NSMCE4A-210ENST00000483541 MMP20O60882 483 aa7.51□□□□□ -1.21
NSMCE4A-210ENST00000483541 ZAP70P43403 619 aa7.51□□□□□ -1.21
NSMCE4A-210ENST00000483541 SIK1P57059 783 aa7.51□□□□□ -1.21
NSMCE4A-210ENST00000483541 NRG1Q02297 640 aaPredicted RBP7.51□□□□□ -1.21
NSMCE4A-210ENST00000483541 FAM26DQ5JW98 314 aa7.51□□□□□ -1.21
NSMCE4A-210ENST00000483541 DMRTC2Q8IXT2 367 aaPredicted RBP7.51□□□□□ -1.21
NSMCE4A-210ENST00000483541 CCDC82Q8N4S0 544 aa7.51□□□□□ -1.21
NSMCE4A-210ENST00000483541 MLLT1Q03111 559 aaPredicted RBP7.5□□□□□ -1.21
NSMCE4A-210ENST00000483541 FMR1NBQ8N0W7 255 aaPredicted RBP7.5□□□□□ -1.21
NSMCE4A-210ENST00000483541 SEMA6BQ9H3T3 888 aa7.5□□□□□ -1.21
NSMCE4A-210ENST00000483541 UBAP1LF5GYI3 381 aa7.49□□□□□ -1.21
NSMCE4A-210ENST00000483541 SELPP16109 830 aa7.49□□□□□ -1.21
NSMCE4A-210ENST00000483541 DOC2BQ14184 412 aa7.49□□□□□ -1.21
NSMCE4A-210ENST00000483541 ADGRE1Q14246 886 aa7.49□□□□□ -1.21
NSMCE4A-210ENST00000483541 TRIP4Q15650 581 aaPredicted RBP7.49□□□□□ -1.21
NSMCE4A-210ENST00000483541 WFDC8Q8IUA0 241 aa7.49□□□□□ -1.21
NSMCE4A-210ENST00000483541 CACTIN-AS1Q8N1I8 211 aa7.49□□□□□ -1.21
NSMCE4A-210ENST00000483541 SMG9Q9H0W8 520 aaKnown RBP7.49□□□□□ -1.21
NSMCE4A-210ENST00000483541 RBSNQ9H1K0 784 aa7.49□□□□□ -1.21
NSMCE4A-210ENST00000483541 ZBTB39O15060 712 aa7.48□□□□□ -1.21
NSMCE4A-210ENST00000483541 GHRHP01286 108 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms