RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 RC3H1Q5TC82 1133 aaKnown RBP8.01□□□□□ -1.13
CSDE1-207ENST00000483407 ZNF530Q6P9A1 599 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-207ENST00000483407 ZBTB3Q9H5J0 574 aa8.01□□□□□ -1.13
CSDE1-207ENST00000483407 CCDC87Q9NVE4 849 aa8.01□□□□□ -1.13
CSDE1-207ENST00000483407 SEPT9Q9UHD8 586 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-207ENST00000483407 VPS9D1Q9Y2B5 631 aa8.01□□□□□ -1.13
CSDE1-207ENST00000483407 CNTNAP4Q9C0A0 1308 aa8.01□□□□□ -1.13
CSDE1-207ENST00000483407 TOGARAM1Q9Y4F4 1720 aa8□□□□□ -1.13
CSDE1-207ENST00000483407 KDRP35968 1356 aa8□□□□□ -1.13
CSDE1-207ENST00000483407 RPS6KA4O75676 772 aa8□□□□□ -1.13
CSDE1-207ENST00000483407 FDX1P10109 184 aa8□□□□□ -1.13
CSDE1-207ENST00000483407 MTHFSP49914 203 aa8□□□□□ -1.13
CSDE1-207ENST00000483407 EIF4G2P78344 907 aaKnown RBP eCLIP8□□□□□ -1.13
CSDE1-207ENST00000483407 LAPTM4BQ86VI4 370 aa8□□□□□ -1.13
CSDE1-207ENST00000483407 CCDC82Q8N4S0 544 aa8□□□□□ -1.13
CSDE1-207ENST00000483407 PANK3Q9H999 370 aa8□□□□□ -1.13
CSDE1-207ENST00000483407 BCS1LQ9Y276 419 aa8□□□□□ -1.13
CSDE1-207ENST00000483407 PARP3Q9Y6F1 533 aa8□□□□□ -1.13
CSDE1-207ENST00000483407 TAF1LQ8IZX4 1826 aa7.99□□□□□ -1.13
CSDE1-207ENST00000483407 MORC1Q86VD1 984 aa7.99□□□□□ -1.13
CSDE1-207ENST00000483407 SLF2Q8IX21 1173 aa7.99□□□□□ -1.13
CSDE1-207ENST00000483407 SLC4A9Q96Q91 983 aa7.99□□□□□ -1.13
CSDE1-207ENST00000483407 PCGF6Q9BYE7 350 aa7.99□□□□□ -1.13
CSDE1-207ENST00000483407 PCDHGC3Q9UN70 934 aa7.99□□□□□ -1.13
CSDE1-207ENST00000483407 PXDNLA1KZ92 1463 aa7.99□□□□□ -1.13
CSDE1-207ENST00000483407 ANKRD26Q9UPS8 1709 aa7.98□□□□□ -1.13
CSDE1-207ENST00000483407 A0A0G2JLW4 131 aa7.98□□□□□ -1.13
CSDE1-207ENST00000483407 BHMG1C9JSJ3 638 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-207ENST00000483407 PTCD1O75127 700 aaKnown RBP7.98□□□□□ -1.13
CSDE1-207ENST00000483407 AP1G2O75843 785 aa7.98□□□□□ -1.13
CSDE1-207ENST00000483407 HSPA5P11021 654 aaKnown RBP7.98□□□□□ -1.13
CSDE1-207ENST00000483407 GYS1P13807 737 aa7.98□□□□□ -1.13
CSDE1-207ENST00000483407 SLC4A3P48751 1232 aa7.98□□□□□ -1.13
CSDE1-207ENST00000483407 ARHGAP27Q6ZUM4 889 aa7.98□□□□□ -1.13
CSDE1-207ENST00000483407 ITGB4P16144 1822 aa7.98□□□□□ -1.13
CSDE1-207ENST00000483407 UBR3Q6ZT12 1888 aa7.98□□□□□ -1.13
CSDE1-207ENST00000483407 C10orf71Q711Q0 1435 aa7.97□□□□□ -1.13
CSDE1-207ENST00000483407 MAP2P11137 1827 aaKnown RBP7.97□□□□□ -1.13
CSDE1-207ENST00000483407 USP17L8P0C7I0 530 aa7.97□□□□□ -1.13
CSDE1-207ENST00000483407 DPEP1P16444 411 aa7.97□□□□□ -1.13
CSDE1-207ENST00000483407 CRKLP46109 303 aaKnown RBP7.97□□□□□ -1.13
CSDE1-207ENST00000483407 SULT6B1Q6IMI4 303 aa7.97□□□□□ -1.13
CSDE1-207ENST00000483407 NFATC2IPQ8NCF5 419 aa7.97□□□□□ -1.13
CSDE1-207ENST00000483407 GDPD2Q9HCC8 539 aa7.97□□□□□ -1.13
CSDE1-207ENST00000483407 PRM3Q9NNZ6 103 aa7.97□□□□□ -1.13
CSDE1-207ENST00000483407 KNSTRNQ9Y448 316 aa7.97□□□□□ -1.13
CSDE1-207ENST00000483407 KDM6AO15550 1401 aaPredicted RBP7.96□□□□□ -1.13
CSDE1-207ENST00000483407 TOMM70O94826 608 aa7.96□□□□□ -1.14
CSDE1-207ENST00000483407 APLP1P51693 650 aa7.96□□□□□ -1.14
CSDE1-207ENST00000483407 GRIPAP1Q4V328 841 aa7.96□□□□□ -1.14
CSDE1-207ENST00000483407 SAMD7Q7Z3H4 446 aa7.96□□□□□ -1.14
CSDE1-207ENST00000483407 AEBP1Q8IUX7 1158 aa7.96□□□□□ -1.14
CSDE1-207ENST00000483407 HLA-CQ95604 372 aa7.96□□□□□ -1.14
CSDE1-207ENST00000483407 NBPF3Q9H094 633 aa7.96□□□□□ -1.14
CSDE1-207ENST00000483407 PIM2Q9P1W9 311 aa7.96□□□□□ -1.14
CSDE1-207ENST00000483407 ZNF330Q9Y3S2 320 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-207ENST00000483407 CICQ96RK0 1608 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-207ENST00000483407 TK2O00142 265 aa7.95□□□□□ -1.14
CSDE1-207ENST00000483407 ZPR1O75312 459 aa7.95□□□□□ -1.14
CSDE1-207ENST00000483407 GUCA2AQ02747 115 aa7.95□□□□□ -1.14
CSDE1-207ENST00000483407 MTMR2Q13614 643 aa7.95□□□□□ -1.14
CSDE1-207ENST00000483407 DALRD3Q5D0E6 543 aaKnown RBP7.95□□□□□ -1.14
CSDE1-207ENST00000483407 AKAP4Q5JQC9 854 aa7.95□□□□□ -1.14
CSDE1-207ENST00000483407 C16orf71Q8IYS4 520 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-207ENST00000483407 SERPINA10Q9UK55 444 aa7.95□□□□□ -1.14
CSDE1-207ENST00000483407 USP42Q9H9J4 1324 aaKnown RBP7.95□□□□□ -1.14
CSDE1-207ENST00000483407 IL13P35225 146 aa7.94□□□□□ -1.14
CSDE1-207ENST00000483407 FUT2Q10981 343 aa7.94□□□□□ -1.14
CSDE1-207ENST00000483407 C9orf131Q5VYM1 1079 aa7.94□□□□□ -1.14
CSDE1-207ENST00000483407 SLC52A2Q9HAB3 445 aa7.94□□□□□ -1.14
CSDE1-207ENST00000483407 SRP68Q9UHB9 627 aaKnown RBP7.94□□□□□ -1.14
CSDE1-207ENST00000483407 KDM2BQ8NHM5 1336 aa7.94□□□□□ -1.14
CSDE1-207ENST00000483407 ZNF831Q5JPB2 1677 aa7.93□□□□□ -1.14
CSDE1-207ENST00000483407 CFHP08603 1231 aa7.93□□□□□ -1.14
CSDE1-207ENST00000483407 KCNA3P22001 575 aa7.93□□□□□ -1.14
CSDE1-207ENST00000483407 DDR1Q08345 913 aa7.93□□□□□ -1.14
CSDE1-207ENST00000483407 INTS5Q6P9B9 1019 aaKnown RBP7.93□□□□□ -1.14
CSDE1-207ENST00000483407 WWC1Q8IX03 1113 aa7.93□□□□□ -1.14
CSDE1-207ENST00000483407 DNAJC10Q8IXB1 793 aa7.93□□□□□ -1.14
CSDE1-207ENST00000483407 ZFRQ96KR1 1074 aaKnown RBP7.93□□□□□ -1.14
CSDE1-207ENST00000483407 NMRK2Q9NPI5 230 aa7.93□□□□□ -1.14
CSDE1-207ENST00000483407 RNF181Q9P0P0 153 aa7.93□□□□□ -1.14
CSDE1-207ENST00000483407 TBC1D2BQ9UPU7 963 aa7.93□□□□□ -1.14
CSDE1-207ENST00000483407 C4AP0C0L4 1744 aa7.92□□□□□ -1.14
CSDE1-207ENST00000483407 POLRMTO00411 1230 aaKnown RBP7.92□□□□□ -1.14
CSDE1-207ENST00000483407 RNMTO43148 476 aaKnown RBP7.92□□□□□ -1.14
CSDE1-207ENST00000483407 TM4SF1P30408 202 aa7.92□□□□□ -1.14
CSDE1-207ENST00000483407 CHRNA5P30532 468 aa7.92□□□□□ -1.14
CSDE1-207ENST00000483407 CTDSPL2Q05D32 466 aa7.92□□□□□ -1.14
CSDE1-207ENST00000483407 USPL1Q5W0Q7 1092 aa7.92□□□□□ -1.14
CSDE1-207ENST00000483407 CCER1Q8TC90 406 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-207ENST00000483407 SOS1Q07889 1333 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-207ENST00000483407 HMOX1P09601 288 aa7.91□□□□□ -1.14
CSDE1-207ENST00000483407 CYP19A1P11511 503 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-207ENST00000483407 ABL2P42684 1182 aa7.91□□□□□ -1.14
CSDE1-207ENST00000483407 FSTL1Q12841 308 aa7.91□□□□□ -1.14
CSDE1-207ENST00000483407 SLC39A6Q13433 755 aa7.91□□□□□ -1.14
CSDE1-207ENST00000483407 ADGRD1Q6QNK2 874 aa7.91□□□□□ -1.14
CSDE1-207ENST00000483407 NECTIN2Q92692 538 aa7.91□□□□□ -1.14
CSDE1-207ENST00000483407 CCDC97Q96F63 343 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms