RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 TM6SF1Q9BZW5 370 aa13.86□□□□□ -0.19
VTI1A-205ENST00000483122 LCMT1Q9UIC8 334 aa13.86□□□□□ -0.19
VTI1A-205ENST00000483122 TRIM66O15016 1216 aa13.86□□□□□ -0.19
VTI1A-205ENST00000483122 FLIIQ13045 1269 aa13.86□□□□□ -0.19
VTI1A-205ENST00000483122 DHX40Q8IX18 779 aaKnown RBP13.86□□□□□ -0.19
VTI1A-205ENST00000483122 TXLNBQ8N3L3 684 aa13.86□□□□□ -0.19
VTI1A-205ENST00000483122 TCEANC2Q96MN5 208 aa13.86□□□□□ -0.19
VTI1A-205ENST00000483122 ZCCHC17Q9NP64 241 aaKnown RBP13.86□□□□□ -0.19
VTI1A-205ENST00000483122 RAB11FIP3O75154 756 aa13.85□□□□□ -0.19
VTI1A-205ENST00000483122 EIF4A2Q14240 407 aaKnown RBP13.85□□□□□ -0.19
VTI1A-205ENST00000483122 MUM1L1Q5H9M0 696 aa13.85□□□□□ -0.19
VTI1A-205ENST00000483122 TMCO3Q6UWJ1 677 aa13.85□□□□□ -0.19
VTI1A-205ENST00000483122 TSPYL4Q9UJ04 414 aa13.85□□□□□ -0.19
VTI1A-205ENST00000483122 ADCY9O60503 1353 aa13.85□□□□□ -0.19
VTI1A-205ENST00000483122 STRCP1A6NGW2 1772 aa13.85□□□□□ -0.19
VTI1A-205ENST00000483122 BECN2A8MW95 431 aa13.85□□□□□ -0.19
VTI1A-205ENST00000483122 CAVIN2O95810 425 aa13.85□□□□□ -0.19
VTI1A-205ENST00000483122 KCNA6P17658 529 aa13.85□□□□□ -0.19
VTI1A-205ENST00000483122 PDCP20941 246 aa13.85□□□□□ -0.19
VTI1A-205ENST00000483122 TNNT3P45378 269 aaPredicted RBP13.85□□□□□ -0.19
VTI1A-205ENST00000483122 TPM4P67936 248 aa13.85□□□□□ -0.19
VTI1A-205ENST00000483122 NBPF11Q86T75 865 aa13.85□□□□□ -0.19
VTI1A-205ENST00000483122 SSH3Q8TE77 659 aa13.85□□□□□ -0.19
VTI1A-205ENST00000483122 USP44Q9H0E7 712 aa13.85□□□□□ -0.19
VTI1A-205ENST00000483122 RASSF4Q9H2L5 321 aa13.85□□□□□ -0.19
VTI1A-205ENST00000483122 ORC3Q9UBD5 711 aaPredicted RBP13.85□□□□□ -0.19
VTI1A-205ENST00000483122 STX1AQ16623 288 aa13.84□□□□□ -0.19
VTI1A-205ENST00000483122 C10orf67Q8IYJ2 551 aa13.84□□□□□ -0.19
VTI1A-205ENST00000483122 KCNB2Q92953 911 aa13.84□□□□□ -0.19
VTI1A-205ENST00000483122 COG3Q96JB2 828 aa13.84□□□□□ -0.19
VTI1A-205ENST00000483122 TMX1Q9H3N1 280 aa13.84□□□□□ -0.19
VTI1A-205ENST00000483122 AMOTL2Q9Y2J4 779 aa13.84□□□□□ -0.19
VTI1A-205ENST00000483122 FOXO3O43524 673 aa13.84□□□□□ -0.19
VTI1A-205ENST00000483122 NECTIN1Q15223 517 aa13.84□□□□□ -0.19
VTI1A-205ENST00000483122 PPP1R42Q7Z4L9 355 aa13.84□□□□□ -0.19
VTI1A-205ENST00000483122 WAPLQ7Z5K2 1190 aa13.84□□□□□ -0.19
VTI1A-205ENST00000483122 ADGRL3Q9HAR2 1447 aa13.84□□□□□ -0.19
VTI1A-205ENST00000483122 SASH3O75995 380 aa13.83□□□□□ -0.19
VTI1A-205ENST00000483122 OAS2P29728 719 aaKnown RBP13.83□□□□□ -0.19
VTI1A-205ENST00000483122 STK3Q13188 491 aa13.83□□□□□ -0.19
VTI1A-205ENST00000483122 SIRT1Q96EB6 747 aa13.83□□□□□ -0.19
VTI1A-205ENST00000483122 STK31Q9BXU1 1019 aa13.83□□□□□ -0.19
VTI1A-205ENST00000483122 UBXN6Q9BZV1 441 aa13.83□□□□□ -0.19
VTI1A-205ENST00000483122 EDC4Q6P2E9 1401 aaKnown RBP13.83□□□□□ -0.2
VTI1A-205ENST00000483122 MYO1CO00159 1063 aa13.83□□□□□ -0.2
VTI1A-205ENST00000483122 IFIT2P09913 472 aaKnown RBP13.83□□□□□ -0.2
VTI1A-205ENST00000483122 UBTFL1P0CB47 393 aaPredicted RBP13.83□□□□□ -0.2
VTI1A-205ENST00000483122 NOP2P46087 812 aaKnown RBP13.83□□□□□ -0.2
VTI1A-205ENST00000483122 AOPEPQ8N6M6 819 aa13.83□□□□□ -0.2
VTI1A-205ENST00000483122 CCDC191Q8NCU4 936 aa13.83□□□□□ -0.2
VTI1A-205ENST00000483122 FBXW7Q969H0 707 aa13.83□□□□□ -0.2
VTI1A-205ENST00000483122 DDX11Q96FC9 970 aa13.83□□□□□ -0.2
VTI1A-205ENST00000483122 EFCC1Q9HA90 598 aa13.83□□□□□ -0.2
VTI1A-205ENST00000483122 GYS2P54840 703 aa13.82□□□□□ -0.2
VTI1A-205ENST00000483122 CEBPZQ03701 1054 aaKnown RBP13.82□□□□□ -0.2
VTI1A-205ENST00000483122 CREB3L3Q68CJ9 461 aa13.82□□□□□ -0.2
VTI1A-205ENST00000483122 UBXN4Q92575 508 aa13.82□□□□□ -0.2
VTI1A-205ENST00000483122 ERCC4Q92889 916 aaPredicted RBP13.82□□□□□ -0.2
VTI1A-205ENST00000483122 EPC1Q9H2F5 836 aa13.82□□□□□ -0.2
VTI1A-205ENST00000483122 ARGLU1Q9NWB6 273 aaPredicted RBP13.82□□□□□ -0.2
VTI1A-205ENST00000483122 RBM8AQ9Y5S9 174 aaKnown RBP13.82□□□□□ -0.2
VTI1A-205ENST00000483122 ARHGEF10O15013 1369 aa13.82□□□□□ -0.2
VTI1A-205ENST00000483122 CRYBG1Q9Y4K1 1723 aa13.82□□□□□ -0.2
VTI1A-205ENST00000483122 GSDMDP57764 484 aa13.82□□□□□ -0.2
VTI1A-205ENST00000483122 RESTQ13127 1097 aa13.82□□□□□ -0.2
VTI1A-205ENST00000483122 ZSCAN26Q16670 478 aa13.82□□□□□ -0.2
VTI1A-205ENST00000483122 ARMCX5Q6P1M9 558 aa13.82□□□□□ -0.2
VTI1A-205ENST00000483122 OSBPL5Q9H0X9 879 aaPredicted RBP13.82□□□□□ -0.2
VTI1A-205ENST00000483122 GOLPH3LQ9H4A5 285 aa13.82□□□□□ -0.2
VTI1A-205ENST00000483122 POLA2Q14181 598 aa13.81□□□□□ -0.2
VTI1A-205ENST00000483122 RUFY2Q8WXA3 655 aa13.81□□□□□ -0.2
VTI1A-205ENST00000483122 ROBO2Q9HCK4 1378 aa13.81□□□□□ -0.2
VTI1A-205ENST00000483122 DHX16O60231 1041 aaKnown RBP13.81□□□□□ -0.2
VTI1A-205ENST00000483122 JAK2O60674 1132 aa13.81□□□□□ -0.2
VTI1A-205ENST00000483122 TBC1D8O95759 1140 aa13.81□□□□□ -0.2
VTI1A-205ENST00000483122 ZKSCAN1P17029 563 aaPredicted RBP13.81□□□□□ -0.2
VTI1A-205ENST00000483122 TAF6LQ9Y6J9 622 aa13.81□□□□□ -0.2
VTI1A-205ENST00000483122 ZNF335Q9H4Z2 1342 aaPredicted RBP13.8□□□□□ -0.2
VTI1A-205ENST00000483122 PSDA5PKW4 1024 aaPredicted RBP13.8□□□□□ -0.2
VTI1A-205ENST00000483122 TMC6Q7Z403 805 aa13.8□□□□□ -0.2
VTI1A-205ENST00000483122 REXO1L1PQ8IX06 675 aa13.8□□□□□ -0.2
VTI1A-205ENST00000483122 CCAR1Q8IX12 1150 aaKnown RBP13.8□□□□□ -0.2
VTI1A-205ENST00000483122 RGS22Q8NE09 1264 aa13.8□□□□□ -0.2
VTI1A-205ENST00000483122 CCDC34Q96HJ3 373 aa13.8□□□□□ -0.2
VTI1A-205ENST00000483122 ATG3Q9NT62 314 aa13.8□□□□□ -0.2
VTI1A-205ENST00000483122 DNAI1Q9UI46 699 aa13.8□□□□□ -0.2
VTI1A-205ENST00000483122 SLC27A2O14975 620 aa13.8□□□□□ -0.2
VTI1A-205ENST00000483122 FANCGO15287 622 aa13.8□□□□□ -0.2
VTI1A-205ENST00000483122 TADA3O75528 432 aa13.8□□□□□ -0.2
VTI1A-205ENST00000483122 TOB2Q14106 344 aaPredicted RBP13.8□□□□□ -0.2
VTI1A-205ENST00000483122 HOMER1Q86YM7 354 aa13.8□□□□□ -0.2
VTI1A-205ENST00000483122 FTOQ9C0B1 505 aaKnown RBP eCLIP13.8□□□□□ -0.2
VTI1A-205ENST00000483122 NRKQ7Z2Y5 1582 aa13.79□□□□□ -0.2
VTI1A-205ENST00000483122 SRGAP3O43295 1099 aa13.79□□□□□ -0.2
VTI1A-205ENST00000483122 SMC1AQ14683 1233 aaKnown RBP13.79□□□□□ -0.2
VTI1A-205ENST00000483122 BRF1Q92994 677 aa13.79□□□□□ -0.2
VTI1A-205ENST00000483122 CHMP4CQ96CF2 233 aa13.79□□□□□ -0.2
VTI1A-205ENST00000483122 CARD6Q9BX69 1037 aa13.79□□□□□ -0.2
VTI1A-205ENST00000483122 GIGYF1O75420 1035 aaPredicted RBP13.79□□□□□ -0.2
VTI1A-205ENST00000483122 CASQ1P31415 396 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms