RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 USP16Q9Y5T5 823 aa12.98□□□□□ -0.33
RPGR-208ENST00000482855 BECN2A8MW95 431 aa12.97□□□□□ -0.33
RPGR-208ENST00000482855 PTH1RQ03431 593 aa12.97□□□□□ -0.33
RPGR-208ENST00000482855 SNW1Q13573 536 aaKnown RBP12.97□□□□□ -0.33
RPGR-208ENST00000482855 TEX35Q5T0J7 233 aa12.97□□□□□ -0.33
RPGR-208ENST00000482855 PROSER2Q86WR7 435 aaPredicted RBP12.97□□□□□ -0.33
RPGR-208ENST00000482855 DDX54Q8TDD1 881 aaKnown RBP12.97□□□□□ -0.33
RPGR-208ENST00000482855 KCND1Q9NSA2 647 aa12.97□□□□□ -0.33
RPGR-208ENST00000482855 FHOD1Q9Y613 1164 aa12.97□□□□□ -0.33
RPGR-208ENST00000482855 MED1Q15648 1581 aaPredicted RBP12.97□□□□□ -0.33
RPGR-208ENST00000482855 CLCN6P51797 869 aa12.97□□□□□ -0.33
RPGR-208ENST00000482855 WAPLQ7Z5K2 1190 aa12.97□□□□□ -0.33
RPGR-208ENST00000482855 MARF1Q9Y4F3 1742 aaKnown RBP12.96□□□□□ -0.33
RPGR-208ENST00000482855 UBAP1LF5GYI3 381 aa12.96□□□□□ -0.33
RPGR-208ENST00000482855 PNMA6AP0CW24 399 aaPredicted RBP12.96□□□□□ -0.33
RPGR-208ENST00000482855 STX1AQ16623 288 aa12.96□□□□□ -0.33
RPGR-208ENST00000482855 PGBD1Q96JS3 809 aa12.96□□□□□ -0.33
RPGR-208ENST00000482855 SLC26A8Q96RN1 970 aa12.96□□□□□ -0.33
RPGR-208ENST00000482855 L2HGDHQ9H9P8 463 aa12.96□□□□□ -0.33
RPGR-208ENST00000482855 CRYBG1Q9Y4K1 1723 aa12.96□□□□□ -0.33
RPGR-208ENST00000482855 CACNA1FO60840 1977 aa12.96□□□□□ -0.33
RPGR-208ENST00000482855 N4BP2Q86UW6 1770 aaPredicted RBP12.96□□□□□ -0.34
RPGR-208ENST00000482855 GSDMDP57764 484 aa12.96□□□□□ -0.34
RPGR-208ENST00000482855 RAD51AP2Q09MP3 1159 aa12.96□□□□□ -0.34
RPGR-208ENST00000482855 CCDC30Q5VVM6 783 aa12.96□□□□□ -0.34
RPGR-208ENST00000482855 C11orf57Q6ZUT1 292 aaPredicted RBP12.96□□□□□ -0.34
RPGR-208ENST00000482855 PPP1R42Q7Z4L9 355 aa12.96□□□□□ -0.34
RPGR-208ENST00000482855 KCNB2Q92953 911 aa12.96□□□□□ -0.34
RPGR-208ENST00000482855 USP44Q9H0E7 712 aa12.96□□□□□ -0.34
RPGR-208ENST00000482855 FEZ2Q9UHY8 353 aaPredicted RBP12.96□□□□□ -0.34
RPGR-208ENST00000482855 FAM208AQ9UK61 1670 aaKnown RBP12.96□□□□□ -0.34
RPGR-208ENST00000482855 TPM4P67936 248 aa12.95□□□□□ -0.34
RPGR-208ENST00000482855 LARP1Q6PKG0 1096 aaKnown RBP12.95□□□□□ -0.34
RPGR-208ENST00000482855 ARGLU1Q9NWB6 273 aaPredicted RBP12.95□□□□□ -0.34
RPGR-208ENST00000482855 GLRX3O76003 335 aaKnown RBP12.95□□□□□ -0.34
RPGR-208ENST00000482855 ROBO2Q9HCK4 1378 aa12.95□□□□□ -0.34
RPGR-208ENST00000482855 MAP3K5Q99683 1374 aa12.94□□□□□ -0.34
RPGR-208ENST00000482855 PSMA5P28066 241 aa12.94□□□□□ -0.34
RPGR-208ENST00000482855 PLA2G4AP47712 749 aa12.94□□□□□ -0.34
RPGR-208ENST00000482855 ARHGAP29Q52LW3 1261 aa12.94□□□□□ -0.34
RPGR-208ENST00000482855 MON2Q7Z3U7 1717 aa12.94□□□□□ -0.34
RPGR-208ENST00000482855 CTAGE5O15320 804 aa12.94□□□□□ -0.34
RPGR-208ENST00000482855 NECTIN1Q15223 517 aa12.94□□□□□ -0.34
RPGR-208ENST00000482855 ANKRD1Q15327 319 aa12.94□□□□□ -0.34
RPGR-208ENST00000482855 TMCO3Q6UWJ1 677 aa12.94□□□□□ -0.34
RPGR-208ENST00000482855 TXLNBQ8N3L3 684 aa12.94□□□□□ -0.34
RPGR-208ENST00000482855 NECTIN2Q92692 538 aa12.94□□□□□ -0.34
RPGR-208ENST00000482855 TTC41PQ6P2S7 1318 aa12.94□□□□□ -0.34
RPGR-208ENST00000482855 POLA2Q14181 598 aa12.94□□□□□ -0.34
RPGR-208ENST00000482855 PXDNLA1KZ92 1463 aa12.93□□□□□ -0.34
RPGR-208ENST00000482855 C1orf167Q5SNV9 1468 aa12.93□□□□□ -0.34
RPGR-208ENST00000482855 SRGAP3O43295 1099 aa12.93□□□□□ -0.34
RPGR-208ENST00000482855 CREB3L3Q68CJ9 461 aa12.93□□□□□ -0.34
RPGR-208ENST00000482855 SYT10Q6XYQ8 523 aa12.93□□□□□ -0.34
RPGR-208ENST00000482855 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.93□□□□□ -0.34
RPGR-208ENST00000482855 RBM8AQ9Y5S9 174 aaKnown RBP12.93□□□□□ -0.34
RPGR-208ENST00000482855 USP54Q70EL1 1684 aa12.93□□□□□ -0.34
RPGR-208ENST00000482855 POLR3GO15318 223 aaPredicted RBP12.92□□□□□ -0.34
RPGR-208ENST00000482855 FOXO3O43524 673 aa12.92□□□□□ -0.34
RPGR-208ENST00000482855 GIGYF1O75420 1035 aaPredicted RBP12.92□□□□□ -0.34
RPGR-208ENST00000482855 CCDC93Q567U6 631 aa12.92□□□□□ -0.34
RPGR-208ENST00000482855 LRRN4CLQ8ND94 238 aa12.92□□□□□ -0.34
RPGR-208ENST00000482855 NEK11Q8NG66 645 aa12.92□□□□□ -0.34
RPGR-208ENST00000482855 PPP1R13BQ96KQ4 1090 aa12.92□□□□□ -0.34
RPGR-208ENST00000482855 USP42Q9H9J4 1324 aaKnown RBP12.92□□□□□ -0.34
RPGR-208ENST00000482855 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.92□□□□□ -0.34
RPGR-208ENST00000482855 TRPM3Q9HCF6 1732 aaPredicted RBP12.92□□□□□ -0.34
RPGR-208ENST00000482855 WASLO00401 505 aaPredicted RBP12.92□□□□□ -0.34
RPGR-208ENST00000482855 TUBB4AP04350 444 aa12.92□□□□□ -0.34
RPGR-208ENST00000482855 HSP90AB4PQ58FF6 505 aa12.92□□□□□ -0.34
RPGR-208ENST00000482855 BLOC1S2Q6QNY1 142 aa12.92□□□□□ -0.34
RPGR-208ENST00000482855 UBXN4Q92575 508 aa12.92□□□□□ -0.34
RPGR-208ENST00000482855 ANO10Q9NW15 660 aa12.92□□□□□ -0.34
RPGR-208ENST00000482855 CFAP45Q9UL16 551 aa12.92□□□□□ -0.34
RPGR-208ENST00000482855 ZRANB2O95218 330 aaKnown RBP eCLIP12.91□□□□□ -0.34
RPGR-208ENST00000482855 TNNT3P45378 269 aaPredicted RBP12.91□□□□□ -0.34
RPGR-208ENST00000482855 OS9Q13438 667 aaPredicted RBP12.91□□□□□ -0.34
RPGR-208ENST00000482855 MUM1L1Q5H9M0 696 aa12.91□□□□□ -0.34
RPGR-208ENST00000482855 E4F1Q66K89 784 aaPredicted RBP12.91□□□□□ -0.34
RPGR-208ENST00000482855 DHX40Q8IX18 779 aaKnown RBP12.91□□□□□ -0.34
RPGR-208ENST00000482855 OSBPL5Q9H0X9 879 aaPredicted RBP12.91□□□□□ -0.34
RPGR-208ENST00000482855 IMPACTQ9P2X3 320 aa12.91□□□□□ -0.34
RPGR-208ENST00000482855 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
RPGR-208ENST00000482855 PSDA5PKW4 1024 aaPredicted RBP12.91□□□□□ -0.34
RPGR-208ENST00000482855 NRDCO43847 1150 aa12.91□□□□□ -0.34
RPGR-208ENST00000482855 GPS2Q13227 327 aa12.91□□□□□ -0.34
RPGR-208ENST00000482855 CEP57L1Q8IYX8 460 aa12.91□□□□□ -0.34
RPGR-208ENST00000482855 TCEANC2Q96MN5 208 aa12.91□□□□□ -0.34
RPGR-208ENST00000482855 CHMP4AQ9BY43 222 aa12.91□□□□□ -0.34
RPGR-208ENST00000482855 STK3Q13188 491 aa12.9□□□□□ -0.34
RPGR-208ENST00000482855 MTHFSDQ2M296 383 aaKnown RBP12.9□□□□□ -0.34
RPGR-208ENST00000482855 CCDC150Q8NCX0 1101 aa12.9□□□□□ -0.34
RPGR-208ENST00000482855 RGPD1P0DJD0 1748 aa12.9□□□□□ -0.34
RPGR-208ENST00000482855 RESTQ13127 1097 aa12.9□□□□□ -0.34
RPGR-208ENST00000482855 GORABQ5T7V8 394 aa12.9□□□□□ -0.34
RPGR-208ENST00000482855 AOPEPQ8N6M6 819 aa12.9□□□□□ -0.34
RPGR-208ENST00000482855 SYTL4Q96C24 671 aaPredicted RBP12.9□□□□□ -0.34
RPGR-208ENST00000482855 NUDT16Q96DE0 195 aaKnown RBP12.9□□□□□ -0.34
RPGR-208ENST00000482855 NAT10Q9H0A0 1025 aaKnown RBP12.9□□□□□ -0.34
RPGR-208ENST00000482855 ORC3Q9UBD5 711 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms