RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 HCN4Q9Y3Q4 1203 aa10.33□□□□□ -0.76
CLK1-212ENST00000482590 RICTORQ6R327 1708 aa10.33□□□□□ -0.76
CLK1-212ENST00000482590 NUP153P49790 1475 aaKnown RBP10.32□□□□□ -0.76
CLK1-212ENST00000482590 RAD21O60216 631 aa10.32□□□□□ -0.76
CLK1-212ENST00000482590 ATP1A2P50993 1020 aa10.32□□□□□ -0.76
CLK1-212ENST00000482590 C8orf86Q6ZUL3 223 aa10.32□□□□□ -0.76
CLK1-212ENST00000482590 RAB44Q7Z6P3 723 aaPredicted RBP10.32□□□□□ -0.76
CLK1-212ENST00000482590 HSH2DQ96JZ2 352 aa10.32□□□□□ -0.76
CLK1-212ENST00000482590 FHOD3Q2V2M9 1422 aa10.32□□□□□ -0.76
CLK1-212ENST00000482590 FRMPD1Q5SYB0 1578 aa10.31□□□□□ -0.76
CLK1-212ENST00000482590 NEO1Q92859 1461 aa10.31□□□□□ -0.76
CLK1-212ENST00000482590 BCORL1Q5H9F3 1711 aa10.31□□□□□ -0.76
CLK1-212ENST00000482590 SPDYE3A6NKU9 549 aa10.31□□□□□ -0.76
CLK1-212ENST00000482590 ALBP02768 609 aa10.31□□□□□ -0.76
CLK1-212ENST00000482590 PRRT3Q5FWE3 981 aa10.31□□□□□ -0.76
CLK1-212ENST00000482590 MICALL1Q8N3F8 863 aa10.31□□□□□ -0.76
CLK1-212ENST00000482590 PHACTR1Q9C0D0 580 aa10.31□□□□□ -0.76
CLK1-212ENST00000482590 ZMYND15Q9H091 742 aa10.31□□□□□ -0.76
CLK1-212ENST00000482590 BRD7Q9NPI1 651 aa10.31□□□□□ -0.76
CLK1-212ENST00000482590 PRDM6Q9NQX0 595 aa10.31□□□□□ -0.76
CLK1-212ENST00000482590 ADAMTSL3P82987 1691 aa10.31□□□□□ -0.76
CLK1-212ENST00000482590 MYO5CQ9NQX4 1742 aa10.3□□□□□ -0.76
CLK1-212ENST00000482590 ARHGEF40Q8TER5 1519 aa10.3□□□□□ -0.76
CLK1-212ENST00000482590 FAM229AH3BQW9 127 aa10.3□□□□□ -0.76
CLK1-212ENST00000482590 ATP9BO43861 1147 aa10.3□□□□□ -0.76
CLK1-212ENST00000482590 KCNQ4P56696 695 aa10.3□□□□□ -0.76
CLK1-212ENST00000482590 HDGFL1Q5TGJ6 251 aa10.3□□□□□ -0.76
CLK1-212ENST00000482590 OGFOD1Q8N543 542 aa10.3□□□□□ -0.76
CLK1-212ENST00000482590 ZNF280CQ8ND82 737 aa10.3□□□□□ -0.76
CLK1-212ENST00000482590 CEP63Q96MT8 703 aa10.3□□□□□ -0.76
CLK1-212ENST00000482590 CCDC9Q9Y3X0 531 aaKnown RBP10.3□□□□□ -0.76
CLK1-212ENST00000482590 TTC37Q6PGP7 1564 aa10.3□□□□□ -0.76
CLK1-212ENST00000482590 HECW1Q76N89 1606 aa10.29□□□□□ -0.76
CLK1-212ENST00000482590 PHLDB1Q86UU1 1377 aa10.29□□□□□ -0.76
CLK1-212ENST00000482590 SFI1A8K8P3 1242 aa10.29□□□□□ -0.76
CLK1-212ENST00000482590 M0R2N6 131 aa10.29□□□□□ -0.76
CLK1-212ENST00000482590 ADH7P40394 386 aa10.29□□□□□ -0.76
CLK1-212ENST00000482590 LARGE2Q8N3Y3 721 aa10.29□□□□□ -0.76
CLK1-212ENST00000482590 ANKIB1Q9P2G1 1089 aa10.29□□□□□ -0.76
CLK1-212ENST00000482590 MADDQ8WXG6 1647 aa10.29□□□□□ -0.76
CLK1-212ENST00000482590 PALM3A6NDB9 673 aaPredicted RBP10.28□□□□□ -0.76
CLK1-212ENST00000482590 DKK1O94907 266 aa10.28□□□□□ -0.76
CLK1-212ENST00000482590 TYRO3Q06418 890 aa10.28□□□□□ -0.76
CLK1-212ENST00000482590 TSEN2Q8NCE0 465 aaKnown RBP10.28□□□□□ -0.76
CLK1-212ENST00000482590 SUSD3Q96L08 255 aa10.28□□□□□ -0.76
CLK1-212ENST00000482590 MKRN1Q9UHC7 482 aaKnown RBP10.28□□□□□ -0.76
CLK1-212ENST00000482590 CHMP3Q9Y3E7 222 aa10.28□□□□□ -0.76
CLK1-212ENST00000482590 RIMS1Q86UR5 1692 aaKnown RBP10.28□□□□□ -0.76
CLK1-212ENST00000482590 C21orf2O43822 256 aa10.27□□□□□ -0.77
CLK1-212ENST00000482590 APBA3O96018 575 aa10.27□□□□□ -0.77
CLK1-212ENST00000482590 NID1P14543 1247 aa10.27□□□□□ -0.77
CLK1-212ENST00000482590 NEUROD1Q13562 356 aa10.27□□□□□ -0.77
CLK1-212ENST00000482590 RSPO4Q2I0M5 234 aaPredicted RBP10.27□□□□□ -0.77
CLK1-212ENST00000482590 C20orf204Q6ZNR8 217 aa10.27□□□□□ -0.77
CLK1-212ENST00000482590 SIX5Q8N196 739 aa10.27□□□□□ -0.77
CLK1-212ENST00000482590 KCNH4Q9UQ05 1017 aa10.27□□□□□ -0.77
CLK1-212ENST00000482590 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLK1-212ENST00000482590 NKAPLQ5M9Q1 402 aa10.26□□□□□ -0.77
CLK1-212ENST00000482590 TPSG1Q9NRR2 321 aa10.26□□□□□ -0.77
CLK1-212ENST00000482590 FER1L4A9Z1Z3 1794 aa10.26□□□□□ -0.77
CLK1-212ENST00000482590 LRRIQ1Q96JM4 1722 aa10.25□□□□□ -0.77
CLK1-212ENST00000482590 PPP1R12BO60237 982 aaPredicted RBP10.25□□□□□ -0.77
CLK1-212ENST00000482590 ZNF594Q96JF6 807 aaPredicted RBP10.25□□□□□ -0.77
CLK1-212ENST00000482590 FANCAO15360 1455 aa10.24□□□□□ -0.77
CLK1-212ENST00000482590 CDK13Q14004 1512 aaKnown RBP10.24□□□□□ -0.77
CLK1-212ENST00000482590 ZMYM4Q5VZL5 1548 aa10.24□□□□□ -0.77
CLK1-212ENST00000482590 FLIIQ13045 1269 aa10.24□□□□□ -0.77
CLK1-212ENST00000482590 TRIM28Q13263 835 aaKnown RBP10.24□□□□□ -0.77
CLK1-212ENST00000482590 KIF14Q15058 1648 aa10.24□□□□□ -0.77
CLK1-212ENST00000482590 DENND4BO75064 1496 aaPredicted RBP10.23□□□□□ -0.77
CLK1-212ENST00000482590 GRIK4Q16099 956 aa10.23□□□□□ -0.77
CLK1-212ENST00000482590 ZMYM1Q5SVZ6 1142 aa10.23□□□□□ -0.77
CLK1-212ENST00000482590 ALDH16A1Q8IZ83 802 aa10.23□□□□□ -0.77
CLK1-212ENST00000482590 BHMTQ93088 406 aa10.23□□□□□ -0.77
CLK1-212ENST00000482590 PTPRMP28827 1452 aa10.23□□□□□ -0.77
CLK1-212ENST00000482590 ZFYVE16Q7Z3T8 1539 aa10.23□□□□□ -0.77
CLK1-212ENST00000482590 ZBTB7CA1YPR0 619 aa10.22□□□□□ -0.77
CLK1-212ENST00000482590 BTLAQ7Z6A9 289 aa10.22□□□□□ -0.77
CLK1-212ENST00000482590 C2orf49Q9BVC5 232 aaPredicted RBP10.22□□□□□ -0.77
CLK1-212ENST00000482590 PLEKHD1A6NEE1 506 aa10.21□□□□□ -0.77
CLK1-212ENST00000482590 STAG2Q8N3U4 1231 aa10.21□□□□□ -0.77
CLK1-212ENST00000482590 NACC1Q96RE7 527 aa10.21□□□□□ -0.77
CLK1-212ENST00000482590 ATAD2Q6PL18 1390 aa10.21□□□□□ -0.78
CLK1-212ENST00000482590 FMN1Q68DA7 1419 aa10.21□□□□□ -0.78
CLK1-212ENST00000482590 AKNAQ7Z591 1439 aa10.21□□□□□ -0.78
CLK1-212ENST00000482590 SIGLEC1Q9BZZ2 1709 aa10.21□□□□□ -0.78
CLK1-212ENST00000482590 LILRB5O75023 590 aa10.2□□□□□ -0.78
CLK1-212ENST00000482590 PCF11O94913 1555 aaKnown RBP10.2□□□□□ -0.78
CLK1-212ENST00000482590 RAPGEF3O95398 923 aa10.2□□□□□ -0.78
CLK1-212ENST00000482590 FOXD4L6Q3SYB3 417 aaPredicted RBP10.2□□□□□ -0.78
CLK1-212ENST00000482590 FOXD4L3Q6VB84 417 aaPredicted RBP10.2□□□□□ -0.78
CLK1-212ENST00000482590 KRTAP4-8Q9BYQ9 185 aa10.2□□□□□ -0.78
CLK1-212ENST00000482590 ARID4BQ4LE39 1312 aaPredicted RBP10.19□□□□□ -0.78
CLK1-212ENST00000482590 DYRK3O43781 588 aa10.19□□□□□ -0.78
CLK1-212ENST00000482590 TRAPPC3LQ5T215 181 aa10.19□□□□□ -0.78
CLK1-212ENST00000482590 SCG3Q8WXD2 468 aaKnown RBP10.19□□□□□ -0.78
CLK1-212ENST00000482590 UBE2OQ9C0C9 1292 aaKnown RBP10.19□□□□□ -0.78
CLK1-212ENST00000482590 RBM19Q9Y4C8 960 aaKnown RBP10.19□□□□□ -0.78
CLK1-212ENST00000482590 RASA1P20936 1047 aa10.18□□□□□ -0.78
CLK1-212ENST00000482590 TBC1D8BQ0IIM8 1120 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms