RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 ZSWIM6Q9HCJ5 1215 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 MED23Q9ULK4 1368 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 FOCADQ5VW36 1801 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 AOX1Q06278 1338 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 MYO3BQ8WXR4 1341 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 CSF1RP07333 972 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 RARSP54136 660 aaKnown RBP3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 EN1Q05925 392 aaPredicted RBP3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 FLIIQ13045 1269 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 ANKRD13DQ6ZTN6 518 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 ERC1Q8IUD2 1116 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 ARHGEF1Q92888 912 aaKnown RBP3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 RBM17Q96I25 401 aaKnown RBP3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 ZNF512BQ96KM6 892 aaPredicted RBP3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 SETDB2Q96T68 719 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 ANKRD2Q9GZV1 360 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 TFCP2L1Q9NZI6 479 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 DDX19BQ9UMR2 479 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 ZBTB1Q9Y2K1 713 aa3.43□□□□□ -1.86
RAB3IP-206ENST00000481897 NBPF26B4DH59 902 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 CCDC152Q4G0S7 254 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 NBPF10Q6P3W6 841 aaKnown RBP3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 COL23A1Q86Y22 540 aaPredicted RBP3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 NBPF15Q8N660 670 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 SNX27Q96L92 541 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 MRIQ9BWK5 157 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 USP35Q9P2H5 1018 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 COL4A1P02462 1669 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 TAF1P21675 1872 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 FBLN1P23142 703 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 CASP7P55210 303 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 ATF7IPQ6VMQ6 1270 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 NLRP10Q86W26 655 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 RPAP2Q8IXW5 612 aaPredicted RBP3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 CNBD1Q8NA66 436 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 SRCIN1Q9C0H9 1055 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 BCL2L12Q9HB09 334 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 LEMD3Q9Y2U8 911 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 CCDC88AQ3V6T2 1871 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 RPAP1Q9BWH6 1393 aaPredicted RBP3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 MROH5Q6ZUA9 1318 aa3.42□□□□□ -1.86
RAB3IP-206ENST00000481897 NEURL1BA8MQ27 555 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 GALR2O43603 387 aaPredicted RBP3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 RAB11FIP3O75154 756 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 HMMRO75330 724 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 RPS12P25398 132 aaKnown RBP3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 BEND3Q5T5X7 828 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 ZNF467Q7Z7K2 595 aaPredicted RBP3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 SP8Q8IXZ3 490 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 FAM212AQ96EL1 285 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 ACSBG1Q96GR2 724 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 EYA3Q99504 573 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 MYH7P12883 1935 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 SALL1Q9NSC2 1324 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 EPB41L2O43491 1005 aaKnown RBP3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 EXOSC9Q06265 439 aaKnown RBP3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 GRAPQ13588 217 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 MIER1Q8N108 512 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 GRAPLQ8TC17 118 aaPredicted RBP3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 TMX4Q9H1E5 349 aaPredicted RBP3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 NOP58Q9Y2X3 529 aaKnown RBP3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 PAPPA2Q9BXP8 1791 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 H0YIN7 160 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 SERPINB2P05120 415 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 CAPN2P17655 700 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 ATP2B4P23634 1241 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 HDLBPQ00341 1268 aaKnown RBP3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 GCKRQ14397 625 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 NFIXQ14938 502 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 CCDC93Q567U6 631 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 LCE2DQ5TA82 110 aaPredicted RBP3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 C8orf58Q8NAV2 365 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 XAGE3Q8WTP9 111 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 SYTL4Q96C24 671 aaPredicted RBP3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 NLRP3Q96P20 1036 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 CHPF2Q9P2E5 772 aa3.41□□□□□ -1.86
RAB3IP-206ENST00000481897 CACNA1SQ13698 1873 aa3.4□□□□□ -1.86
RAB3IP-206ENST00000481897 MAST3O60307 1309 aa3.4□□□□□ -1.86
RAB3IP-206ENST00000481897 DDX60LQ5H9U9 1706 aaKnown RBP3.4□□□□□ -1.86
RAB3IP-206ENST00000481897 GRM8O00222 908 aa3.4□□□□□ -1.86
RAB3IP-206ENST00000481897 PLCG2P16885 1265 aa3.4□□□□□ -1.86
RAB3IP-206ENST00000481897 PRR5LQ6MZQ0 368 aa3.4□□□□□ -1.86
RAB3IP-206ENST00000481897 RIC3Q7Z5B4 369 aa3.4□□□□□ -1.86
RAB3IP-206ENST00000481897 CCDC146Q8IYE0 955 aa3.4□□□□□ -1.86
RAB3IP-206ENST00000481897 MS4A3Q96HJ5 214 aa3.4□□□□□ -1.86
RAB3IP-206ENST00000481897 OCEL1Q9H607 264 aa3.4□□□□□ -1.86
RAB3IP-206ENST00000481897 COPRSQ9NQ92 184 aa3.4□□□□□ -1.86
RAB3IP-206ENST00000481897 GINM1Q9NU53 330 aa3.4□□□□□ -1.86
RAB3IP-206ENST00000481897 BSDC1Q9NW68 430 aaPredicted RBP3.4□□□□□ -1.86
RAB3IP-206ENST00000481897 PIM2Q9P1W9 311 aa3.4□□□□□ -1.86
RAB3IP-206ENST00000481897 USP16Q9Y5T5 823 aa3.4□□□□□ -1.86
RAB3IP-206ENST00000481897 SRGNP10124 158 aa3.4□□□□□ -1.87
RAB3IP-206ENST00000481897 CTSWP56202 376 aa3.4□□□□□ -1.87
RAB3IP-206ENST00000481897 FKBP4Q02790 459 aaKnown RBP eCLIP3.4□□□□□ -1.87
RAB3IP-206ENST00000481897 UBE4AQ14139 1066 aa3.4□□□□□ -1.87
RAB3IP-206ENST00000481897 COPS6Q7L5N1 327 aa3.4□□□□□ -1.87
RAB3IP-206ENST00000481897 NBPF5PQ86XG9 351 aaPredicted RBP3.4□□□□□ -1.87
RAB3IP-206ENST00000481897 FAM9BQ8IZU0 186 aa3.4□□□□□ -1.87
RAB3IP-206ENST00000481897 SMC4Q9NTJ3 1288 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms