RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 EXOC6Q8TAG9 804 aa25.94■■□□□ 1.74
VPS16-207ENST00000481812 DLEC1Q9Y238 1755 aa25.93■■□□□ 1.74
VPS16-207ENST00000481812 NEFLP07196 543 aa25.93■■□□□ 1.74
VPS16-207ENST00000481812 LMBR1LQ6UX01 489 aa25.93■■□□□ 1.74
VPS16-207ENST00000481812 C3orf67Q6ZVT6 689 aa25.93■■□□□ 1.74
VPS16-207ENST00000481812 KIAA1551Q9HCM1 1747 aa25.93■■□□□ 1.74
VPS16-207ENST00000481812 H0YIN7 160 aa25.92■■□□□ 1.74
VPS16-207ENST00000481812 SRGNP10124 158 aa25.92■■□□□ 1.74
VPS16-207ENST00000481812 HOXA10P31260 410 aaPredicted RBP25.92■■□□□ 1.74
VPS16-207ENST00000481812 COL11A2P13942 1736 aaPredicted RBP25.91■■□□□ 1.74
VPS16-207ENST00000481812 NPR1P16066 1061 aa25.91■■□□□ 1.74
VPS16-207ENST00000481812 IRX6P78412 446 aaPredicted RBP25.91■■□□□ 1.74
VPS16-207ENST00000481812 RPAP2Q8IXW5 612 aaPredicted RBP25.91■■□□□ 1.74
VPS16-207ENST00000481812 ATP8B2P98198 1209 aa25.9■■□□□ 1.74
VPS16-207ENST00000481812 STYK1Q6J9G0 422 aa25.9■■□□□ 1.74
VPS16-207ENST00000481812 C2CD5Q86YS7 1000 aa25.9■■□□□ 1.74
VPS16-207ENST00000481812 MASTLQ96GX5 879 aa25.9■■□□□ 1.74
VPS16-207ENST00000481812 PPP1R1BQ9UD71 204 aaPredicted RBP25.9■■□□□ 1.74
VPS16-207ENST00000481812 RPGRQ92834 1020 aaKnown RBP25.89■■□□□ 1.74
VPS16-207ENST00000481812 RBM17Q96I25 401 aaKnown RBP25.89■■□□□ 1.74
VPS16-207ENST00000481812 CRAMP1Q96RY5 1269 aa25.89■■□□□ 1.74
VPS16-207ENST00000481812 C1orf115Q9H7X2 142 aa25.89■■□□□ 1.74
VPS16-207ENST00000481812 CEP85Q6P2H3 762 aa25.88■■□□□ 1.73
VPS16-207ENST00000481812 DDX46Q7L014 1031 aaKnown RBP25.88■■□□□ 1.73
VPS16-207ENST00000481812 GREM2Q9H772 168 aa25.88■■□□□ 1.73
VPS16-207ENST00000481812 ALDH1B1P30837 517 aa25.87■■□□□ 1.73
VPS16-207ENST00000481812 BRCA1P38398 1863 aaKnown RBP25.86■■□□□ 1.73
VPS16-207ENST00000481812 ITGA6P23229 1130 aa25.86■■□□□ 1.73
VPS16-207ENST00000481812 IFIT5Q13325 482 aaKnown RBP25.86■■□□□ 1.73
VPS16-207ENST00000481812 CCDC57Q2TAC2 916 aa25.86■■□□□ 1.73
VPS16-207ENST00000481812 FAM161AQ3B820 660 aa25.86■■□□□ 1.73
VPS16-207ENST00000481812 ERICH6BQ5W0A0 696 aa25.86■■□□□ 1.73
VPS16-207ENST00000481812 ANKRD18BA2A2Z9 1011 aa25.85■■□□□ 1.73
VPS16-207ENST00000481812 DPEP1P16444 411 aa25.85■■□□□ 1.73
VPS16-207ENST00000481812 KCNA3P22001 575 aa25.85■■□□□ 1.73
VPS16-207ENST00000481812 CHRNA5P30532 468 aa25.85■■□□□ 1.73
VPS16-207ENST00000481812 SSH3Q8TE77 659 aa25.85■■□□□ 1.73
VPS16-207ENST00000481812 CDC5LQ99459 802 aaKnown RBP25.85■■□□□ 1.73
VPS16-207ENST00000481812 FHDC1Q9C0D6 1143 aaPredicted RBP25.85■■□□□ 1.73
VPS16-207ENST00000481812 CHMP3Q9Y3E7 222 aa25.85■■□□□ 1.73
VPS16-207ENST00000481812 TAF1P21675 1872 aa25.84■■□□□ 1.73
VPS16-207ENST00000481812 GRAPQ13588 217 aa25.84■■□□□ 1.73
VPS16-207ENST00000481812 POLA2Q14181 598 aa25.84■■□□□ 1.73
VPS16-207ENST00000481812 GRAPLQ8TC17 118 aaPredicted RBP25.84■■□□□ 1.73
VPS16-207ENST00000481812 CNKSR1Q969H4 720 aa25.84■■□□□ 1.73
VPS16-207ENST00000481812 A0A0G2JLW4 131 aa25.83■■□□□ 1.73
VPS16-207ENST00000481812 SRGAP3O43295 1099 aa25.83■■□□□ 1.73
VPS16-207ENST00000481812 RFX5P48382 616 aaPredicted RBP25.83■■□□□ 1.73
VPS16-207ENST00000481812 CCDC85AQ96PX6 553 aaPredicted RBP25.83■■□□□ 1.73
VPS16-207ENST00000481812 SYT17Q9BSW7 474 aa25.83■■□□□ 1.73
VPS16-207ENST00000481812 SEC31BQ9NQW1 1179 aa25.83■■□□□ 1.73
VPS16-207ENST00000481812 PCDHB15Q9Y5E8 787 aa25.83■■□□□ 1.73
VPS16-207ENST00000481812 PNMA6EA0A0J9YXQ4 647 aa25.82■■□□□ 1.72
VPS16-207ENST00000481812 HMMRO75330 724 aa25.82■■□□□ 1.72
VPS16-207ENST00000481812 BBOX1O75936 387 aa25.82■■□□□ 1.72
VPS16-207ENST00000481812 RPS8P62241 208 aaKnown RBP25.82■■□□□ 1.72
VPS16-207ENST00000481812 TMC4Q7Z404 712 aa25.82■■□□□ 1.72
VPS16-207ENST00000481812 KLHL34Q8N239 644 aa25.82■■□□□ 1.72
VPS16-207ENST00000481812 ZNF622Q969S3 477 aaKnown RBP eCLIP25.82■■□□□ 1.72
VPS16-207ENST00000481812 FBXO3Q9UK99 471 aa25.82■■□□□ 1.72
VPS16-207ENST00000481812 SIRT2Q8IXJ6 389 aa25.81■■□□□ 1.72
VPS16-207ENST00000481812 COPRSQ9NQ92 184 aa25.81■■□□□ 1.72
VPS16-207ENST00000481812 PIM2Q9P1W9 311 aa25.81■■□□□ 1.72
VPS16-207ENST00000481812 PTPN12Q05209 780 aaKnown RBP25.8■■□□□ 1.72
VPS16-207ENST00000481812 ANKRD18AQ8IVF6 992 aa25.8■■□□□ 1.72
VPS16-207ENST00000481812 TTLL6Q8N841 843 aa25.8■■□□□ 1.72
VPS16-207ENST00000481812 CACNA1SQ13698 1873 aa25.8■■□□□ 1.72
VPS16-207ENST00000481812 IGHMBP2P38935 993 aaKnown RBP25.79■■□□□ 1.72
VPS16-207ENST00000481812 NLGN2Q8NFZ4 835 aa25.79■■□□□ 1.72
VPS16-207ENST00000481812 CELF1Q92879 486 aaKnown RBP25.79■■□□□ 1.72
VPS16-207ENST00000481812 SLX4Q8IY92 1834 aa25.79■■□□□ 1.72
VPS16-207ENST00000481812 TAF7LQ5H9L4 462 aa25.78■■□□□ 1.72
VPS16-207ENST00000481812 BSDC1Q9NW68 430 aaPredicted RBP25.78■■□□□ 1.72
VPS16-207ENST00000481812 SPEF2Q9C093 1822 aa25.77■■□□□ 1.72
VPS16-207ENST00000481812 COL4A1P02462 1669 aa25.77■■□□□ 1.72
VPS16-207ENST00000481812 HDAC1Q13547 482 aaPredicted RBP25.76■■□□□ 1.71
VPS16-207ENST00000481812 MPHOSPH8Q99549 860 aa25.76■■□□□ 1.71
VPS16-207ENST00000481812 NOP58Q9Y2X3 529 aaKnown RBP25.76■■□□□ 1.71
VPS16-207ENST00000481812 CIAO1O76071 339 aa25.75■■□□□ 1.71
VPS16-207ENST00000481812 PRPF40BQ6NWY9 871 aaKnown RBP25.75■■□□□ 1.71
VPS16-207ENST00000481812 LDHAL6AQ6ZMR3 332 aa25.75■■□□□ 1.71
VPS16-207ENST00000481812 ZNF594Q96JF6 807 aaPredicted RBP25.75■■□□□ 1.71
VPS16-207ENST00000481812 ARFGEF1Q9Y6D6 1849 aa25.74■■□□□ 1.71
VPS16-207ENST00000481812 LRRC37AA6NMS7 1700 aa25.74■■□□□ 1.71
VPS16-207ENST00000481812 PPEF1O14829 653 aaPredicted RBP25.74■■□□□ 1.71
VPS16-207ENST00000481812 DALRD3Q5D0E6 543 aaKnown RBP25.74■■□□□ 1.71
VPS16-207ENST00000481812 SP8Q8IXZ3 490 aa25.74■■□□□ 1.71
VPS16-207ENST00000481812 EYA2O00167 538 aa25.73■■□□□ 1.71
VPS16-207ENST00000481812 CC2D2BQ6DHV5 1058 aa25.73■■□□□ 1.71
VPS16-207ENST00000481812 C7orf43Q8WVR3 580 aa25.73■■□□□ 1.71
VPS16-207ENST00000481812 RWDD1Q9H446 243 aaPredicted RBP25.73■■□□□ 1.71
VPS16-207ENST00000481812 PA2G4Q9UQ80 394 aaKnown RBP25.73■■□□□ 1.71
VPS16-207ENST00000481812 ATP6V0A2Q9Y487 856 aa25.73■■□□□ 1.71
VPS16-207ENST00000481812 RIPOR2Q9Y4F9 1068 aa25.73■■□□□ 1.71
VPS16-207ENST00000481812 HSP90AB4PQ58FF6 505 aa25.72■■□□□ 1.71
VPS16-207ENST00000481812 KLHDC4Q8TBB5 520 aa25.72■■□□□ 1.71
VPS16-207ENST00000481812 GRIPAP1Q4V328 841 aa25.71■■□□□ 1.71
VPS16-207ENST00000481812 DCTPP1Q9H773 170 aa25.71■■□□□ 1.71
VPS16-207ENST00000481812 CNNM1Q9NRU3 951 aa25.71■■□□□ 1.71
VPS16-207ENST00000481812 SURF6O75683 361 aaKnown RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms