RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 CGNQ9P2M7 1197 aaKnown RBP16.89■□□□□ 0.29
CCDC78-211ENST00000481804 CFAP45Q9UL16 551 aa16.89■□□□□ 0.29
CCDC78-211ENST00000481804 ADAMTS13Q76LX8 1427 aa16.89■□□□□ 0.29
CCDC78-211ENST00000481804 TOB2Q14106 344 aaPredicted RBP16.89■□□□□ 0.29
CCDC78-211ENST00000481804 PGBD1Q96JS3 809 aa16.89■□□□□ 0.29
CCDC78-211ENST00000481804 FMN2Q9NZ56 1722 aa16.89■□□□□ 0.29
CCDC78-211ENST00000481804 KSR2Q6VAB6 950 aa16.89■□□□□ 0.29
CCDC78-211ENST00000481804 CCDC73Q6ZRK6 1079 aa16.89■□□□□ 0.29
CCDC78-211ENST00000481804 BICC1Q9H694 974 aaKnown RBP16.89■□□□□ 0.29
CCDC78-211ENST00000481804 PTPN14Q15678 1187 aa16.88■□□□□ 0.29
CCDC78-211ENST00000481804 CCDC144BQ3MJ40 725 aa16.88■□□□□ 0.29
CCDC78-211ENST00000481804 ZNF589Q86UQ0 364 aaPredicted RBP16.88■□□□□ 0.29
CCDC78-211ENST00000481804 CCDC144CPQ8IYA2 1237 aa16.88■□□□□ 0.29
CCDC78-211ENST00000481804 KLHDC4Q8TBB5 520 aa16.88■□□□□ 0.29
CCDC78-211ENST00000481804 EDC3Q96F86 508 aaKnown RBP16.88■□□□□ 0.29
CCDC78-211ENST00000481804 TRMT1Q9NXH9 659 aaKnown RBP16.88■□□□□ 0.29
CCDC78-211ENST00000481804 HMG20BQ9P0W2 317 aa16.88■□□□□ 0.29
CCDC78-211ENST00000481804 NALCNQ8IZF0 1738 aa16.88■□□□□ 0.29
CCDC78-211ENST00000481804 GRM8O00222 908 aa16.88■□□□□ 0.29
CCDC78-211ENST00000481804 SASH1O94885 1247 aa16.88■□□□□ 0.29
CCDC78-211ENST00000481804 PROSER3Q2NL68 480 aa16.88■□□□□ 0.29
CCDC78-211ENST00000481804 C1orf141Q5JVX7 400 aa16.88■□□□□ 0.29
CCDC78-211ENST00000481804 SUCLG2Q96I99 432 aa16.88■□□□□ 0.29
CCDC78-211ENST00000481804 LRRC2Q9BYS8 371 aa16.88■□□□□ 0.29
CCDC78-211ENST00000481804 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.88■□□□□ 0.29
CCDC78-211ENST00000481804 CCDC9Q9Y3X0 531 aaKnown RBP16.88■□□□□ 0.29
CCDC78-211ENST00000481804 V9GYY5 206 aaPredicted RBP16.88■□□□□ 0.29
CCDC78-211ENST00000481804 KRT32Q14532 448 aa16.87■□□□□ 0.29
CCDC78-211ENST00000481804 ZRSR1Q15695 479 aaKnown RBP16.87■□□□□ 0.29
CCDC78-211ENST00000481804 KINO60870 393 aaKnown RBP16.87■□□□□ 0.29
CCDC78-211ENST00000481804 DDX58O95786 925 aaKnown RBP16.87■□□□□ 0.29
CCDC78-211ENST00000481804 SKILP12757 684 aa16.87■□□□□ 0.29
CCDC78-211ENST00000481804 NEK1Q96PY6 1258 aa16.87■□□□□ 0.29
CCDC78-211ENST00000481804 CAVIN2O95810 425 aa16.87■□□□□ 0.29
CCDC78-211ENST00000481804 ARID5BQ14865 1188 aa16.86■□□□□ 0.29
CCDC78-211ENST00000481804 Q6ZUG5 572 aa16.86■□□□□ 0.29
CCDC78-211ENST00000481804 DNAJC2Q99543 621 aaKnown RBP16.86■□□□□ 0.29
CCDC78-211ENST00000481804 PTPRUQ92729 1446 aa16.86■□□□□ 0.29
CCDC78-211ENST00000481804 PPFIA3O75145 1194 aa16.86■□□□□ 0.29
CCDC78-211ENST00000481804 STX1AQ16623 288 aa16.86■□□□□ 0.29
CCDC78-211ENST00000481804 NBPF6Q5VWK0 638 aa16.86■□□□□ 0.29
CCDC78-211ENST00000481804 RIC3Q7Z5B4 369 aa16.86■□□□□ 0.29
CCDC78-211ENST00000481804 CCAR1Q8IX12 1150 aaKnown RBP16.86■□□□□ 0.29
CCDC78-211ENST00000481804 NBPF4Q96M43 638 aa16.86■□□□□ 0.29
CCDC78-211ENST00000481804 USP16Q9Y5T5 823 aa16.86■□□□□ 0.29
CCDC78-211ENST00000481804 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.86■□□□□ 0.29
CCDC78-211ENST00000481804 NPHP1O15259 732 aa16.85■□□□□ 0.29
CCDC78-211ENST00000481804 GTF3C6Q969F1 213 aa16.85■□□□□ 0.29
CCDC78-211ENST00000481804 C11orf57Q6ZUT1 292 aaPredicted RBP16.85■□□□□ 0.29
CCDC78-211ENST00000481804 LRRC8AQ8IWT6 810 aa16.85■□□□□ 0.29
CCDC78-211ENST00000481804 ZSCAN16Q9H4T2 348 aaPredicted RBP16.85■□□□□ 0.29
CCDC78-211ENST00000481804 A0A087WWV3 80 aa16.85■□□□□ 0.29
CCDC78-211ENST00000481804 PLEKHO1Q53GL0 409 aaPredicted RBP16.85■□□□□ 0.29
CCDC78-211ENST00000481804 LINS1Q8NG48 757 aa16.85■□□□□ 0.29
CCDC78-211ENST00000481804 CTNNA3Q9UI47 895 aa16.85■□□□□ 0.29
CCDC78-211ENST00000481804 A0A0U1RQG5 324 aaPredicted RBP16.84■□□□□ 0.29
CCDC78-211ENST00000481804 RBM43Q6ZSC3 357 aaKnown RBP16.84■□□□□ 0.29
CCDC78-211ENST00000481804 NDUFB9Q9Y6M9 179 aa16.84■□□□□ 0.29
CCDC78-211ENST00000481804 CCDC69A6NI79 296 aa16.84■□□□□ 0.29
CCDC78-211ENST00000481804 NEMFO60524 1076 aa16.84■□□□□ 0.29
CCDC78-211ENST00000481804 TRHP20396 242 aaPredicted RBP16.84■□□□□ 0.29
CCDC78-211ENST00000481804 ME1P48163 572 aa16.84■□□□□ 0.29
CCDC78-211ENST00000481804 RESTQ13127 1097 aa16.84■□□□□ 0.29
CCDC78-211ENST00000481804 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
CCDC78-211ENST00000481804 SETD1BQ9UPS6 1966 aaKnown RBP16.84■□□□□ 0.29
CCDC78-211ENST00000481804 PLEKHG1Q9ULL1 1385 aa16.83■□□□□ 0.29
CCDC78-211ENST00000481804 NEXNQ0ZGT2 675 aa16.83■□□□□ 0.29
CCDC78-211ENST00000481804 SYCP1Q15431 976 aa16.83■□□□□ 0.29
CCDC78-211ENST00000481804 CCDC129Q6ZRS4 1044 aa16.83■□□□□ 0.29
CCDC78-211ENST00000481804 CEMIPQ8WUJ3 1361 aa16.83■□□□□ 0.28
CCDC78-211ENST00000481804 PRAMEF22A3QJZ6 481 aa16.83■□□□□ 0.28
CCDC78-211ENST00000481804 USP27XA6NNY8 438 aa16.83■□□□□ 0.28
CCDC78-211ENST00000481804 TAF5LO75529 589 aa16.83■□□□□ 0.28
CCDC78-211ENST00000481804 FTOQ9C0B1 505 aaKnown RBP eCLIP16.83■□□□□ 0.28
CCDC78-211ENST00000481804 LRRC37A3O60309 1634 aa16.83■□□□□ 0.28
CCDC78-211ENST00000481804 CTAGE5O15320 804 aa16.83■□□□□ 0.28
CCDC78-211ENST00000481804 SDF4Q9BRK5 362 aa16.83■□□□□ 0.28
CCDC78-211ENST00000481804 ZNF215Q9UL58 517 aaPredicted RBP16.83■□□□□ 0.28
CCDC78-211ENST00000481804 TOPAZ1Q8N9V7 1692 aa16.83■□□□□ 0.28
CCDC78-211ENST00000481804 GUCY1B3Q02153 619 aa16.82■□□□□ 0.28
CCDC78-211ENST00000481804 AKAP4Q5JQC9 854 aa16.82■□□□□ 0.28
CCDC78-211ENST00000481804 CEP57L1Q8IYX8 460 aa16.82■□□□□ 0.28
CCDC78-211ENST00000481804 ANO10Q9NW15 660 aa16.82■□□□□ 0.28
CCDC78-211ENST00000481804 ERCC4Q92889 916 aaPredicted RBP16.82■□□□□ 0.28
CCDC78-211ENST00000481804 CDC25BP30305 580 aa16.81■□□□□ 0.28
CCDC78-211ENST00000481804 KIF18AQ8NI77 898 aa16.81■□□□□ 0.28
CCDC78-211ENST00000481804 GIGYF1O75420 1035 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-211ENST00000481804 MYL6BP14649 208 aa16.81■□□□□ 0.28
CCDC78-211ENST00000481804 CCT2P78371 535 aaKnown RBP16.81■□□□□ 0.28
CCDC78-211ENST00000481804 FSIP1Q8NA03 581 aa16.81■□□□□ 0.28
CCDC78-211ENST00000481804 MRFAP1L1Q96HT8 127 aa16.81■□□□□ 0.28
CCDC78-211ENST00000481804 IQCB1Q15051 598 aa16.81■□□□□ 0.28
CCDC78-211ENST00000481804 AOPEPQ8N6M6 819 aa16.81■□□□□ 0.28
CCDC78-211ENST00000481804 IP6K1Q92551 441 aa16.81■□□□□ 0.28
CCDC78-211ENST00000481804 NAT10Q9H0A0 1025 aaKnown RBP16.81■□□□□ 0.28
CCDC78-211ENST00000481804 PODXL2Q9NZ53 605 aa16.81■□□□□ 0.28
CCDC78-211ENST00000481804 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-211ENST00000481804 NPHP4O75161 1426 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-211ENST00000481804 UBR1Q8IWV7 1749 aa16.81■□□□□ 0.28
CCDC78-211ENST00000481804 LMOD2Q6P5Q4 547 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms