RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 PPP1R18Q6NYC8 613 aa4.68□□□□□ -1.66
SMC6-208ENST00000481708 PHTF2Q8N3S3 785 aa4.68□□□□□ -1.66
SMC6-208ENST00000481708 GABBR1Q9UBS5 961 aa4.68□□□□□ -1.66
SMC6-208ENST00000481708 RBL2Q08999 1139 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 PRR14Q9BWN1 585 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 SIPA1L3O60292 1781 aaPredicted RBP4.67□□□□□ -1.66
SMC6-208ENST00000481708 SKIP12755 728 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 RASA1P20936 1047 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 PTPROQ16827 1216 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 ANKMY2Q8IV38 441 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 HFM1A2PYH4 1435 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 RGS12O14924 1447 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 SPATA31E1Q6ZUB1 1445 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 POTEMA6NI47 508 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 TLL1O43897 1013 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 JUNDP17535 347 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 ZNF394Q53GI3 561 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 KANSL2Q9H9L4 492 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 FKBPLQ9UIM3 349 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 AATKQ6ZMQ8 1374 aa4.67□□□□□ -1.66
SMC6-208ENST00000481708 RGPD5Q99666 1765 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 GOLGA8CPA6NN73 597 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 ZBTB7BO15156 539 aaPredicted RBP4.66□□□□□ -1.66
SMC6-208ENST00000481708 FMNL1O95466 1100 aaPredicted RBP4.66□□□□□ -1.66
SMC6-208ENST00000481708 COPS2P61201 443 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 PTPRNQ16849 979 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 TRAF7Q6Q0C0 670 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 PMFBP1Q8TBY8 1022 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 PCDHGB7Q9Y5F8 929 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 C5P01031 1676 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 SOX11P35716 441 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 RGL4Q8IZJ4 473 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 GTF3C2Q8WUA4 911 aaPredicted RBP4.66□□□□□ -1.66
SMC6-208ENST00000481708 PMM1Q92871 262 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 CXXC1Q9P0U4 656 aaPredicted RBP4.66□□□□□ -1.66
SMC6-208ENST00000481708 DCTN4Q9UJW0 460 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 FAN1Q9Y2M0 1017 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 AFDNP55196 1824 aaKnown RBP4.66□□□□□ -1.66
SMC6-208ENST00000481708 RAPGEF3O95398 923 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 BMS1Q14692 1282 aaKnown RBP4.66□□□□□ -1.66
SMC6-208ENST00000481708 THSD4Q6ZMP0 1018 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 MCF2L2Q86YR7 1114 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 FAM200AQ8TCP9 573 aa4.66□□□□□ -1.66
SMC6-208ENST00000481708 ADGRL3Q9HAR2 1447 aa4.65□□□□□ -1.66
SMC6-208ENST00000481708 C21orf2O43822 256 aa4.65□□□□□ -1.66
SMC6-208ENST00000481708 NR1I2O75469 434 aa4.65□□□□□ -1.66
SMC6-208ENST00000481708 DXOO77932 396 aaKnown RBP4.65□□□□□ -1.66
SMC6-208ENST00000481708 CTSHP09668 335 aa4.65□□□□□ -1.66
SMC6-208ENST00000481708 NR1H3Q13133 447 aa4.65□□□□□ -1.66
SMC6-208ENST00000481708 NFATC2IPQ8NCF5 419 aa4.65□□□□□ -1.66
SMC6-208ENST00000481708 PLEKHG2Q9H7P9 1386 aa4.65□□□□□ -1.67
SMC6-208ENST00000481708 FMR1Q06787 632 aaKnown RBP eCLIP4.65□□□□□ -1.67
SMC6-208ENST00000481708 RAVER1Q8IY67 606 aaKnown RBP4.65□□□□□ -1.67
SMC6-208ENST00000481708 SPSB2Q99619 263 aa4.65□□□□□ -1.67
SMC6-208ENST00000481708 EGFL7Q9UHF1 273 aa4.65□□□□□ -1.67
SMC6-208ENST00000481708 EMILIN1Q9Y6C2 1016 aa4.65□□□□□ -1.67
SMC6-208ENST00000481708 UBR2Q8IWV8 1755 aa4.65□□□□□ -1.67
SMC6-208ENST00000481708 TULP4Q9NRJ4 1543 aa4.65□□□□□ -1.67
SMC6-208ENST00000481708 CCDC194A0A1B0GVG4 234 aa4.65□□□□□ -1.67
SMC6-208ENST00000481708 ZBBXA8MT70 800 aa4.65□□□□□ -1.67
SMC6-208ENST00000481708 MSS51Q4VC12 460 aa4.65□□□□□ -1.67
SMC6-208ENST00000481708 OGFOD1Q8N543 542 aa4.65□□□□□ -1.67
SMC6-208ENST00000481708 MKNK1Q9BUB5 465 aa4.65□□□□□ -1.67
SMC6-208ENST00000481708 ZSWIM4Q9H7M6 989 aa4.65□□□□□ -1.67
SMC6-208ENST00000481708 TMA7Q9Y2S6 64 aaKnown RBP4.65□□□□□ -1.67
SMC6-208ENST00000481708 NCAPD2Q15021 1401 aa4.65□□□□□ -1.67
SMC6-208ENST00000481708 DUOX1Q9NRD9 1551 aa4.65□□□□□ -1.67
SMC6-208ENST00000481708 RBBP6Q7Z6E9 1792 aaKnown RBP4.64□□□□□ -1.67
SMC6-208ENST00000481708 ADAMTSL1Q8N6G6 1762 aa4.64□□□□□ -1.67
SMC6-208ENST00000481708 MMP16P51512 607 aa4.64□□□□□ -1.67
SMC6-208ENST00000481708 FAM26DQ5JW98 314 aa4.64□□□□□ -1.67
SMC6-208ENST00000481708 CAPN10Q9HC96 672 aa4.64□□□□□ -1.67
SMC6-208ENST00000481708 CHIC2Q9UKJ5 165 aa4.64□□□□□ -1.67
SMC6-208ENST00000481708 PIK3C2GO75747 1445 aa4.64□□□□□ -1.67
SMC6-208ENST00000481708 DNAJA1P31689 397 aaKnown RBP4.64□□□□□ -1.67
SMC6-208ENST00000481708 FKBP5Q13451 457 aaPredicted RBP4.64□□□□□ -1.67
SMC6-208ENST00000481708 SWI5Q1ZZU3 235 aa4.64□□□□□ -1.67
SMC6-208ENST00000481708 SLC43A3Q8NBI5 491 aa4.64□□□□□ -1.67
SMC6-208ENST00000481708 EVA1BQ9NVM1 165 aa4.64□□□□□ -1.67
SMC6-208ENST00000481708 PARP2Q9UGN5 583 aa4.64□□□□□ -1.67
SMC6-208ENST00000481708 CCNYL3P0C7X3 344 aa4.64□□□□□ -1.67
SMC6-208ENST00000481708 EAPPQ56P03 285 aaPredicted RBP4.64□□□□□ -1.67
SMC6-208ENST00000481708 TGIF2Q9GZN2 237 aa4.64□□□□□ -1.67
SMC6-208ENST00000481708 CHPF2Q9P2E5 772 aa4.64□□□□□ -1.67
SMC6-208ENST00000481708 CCDC144AA2RUR9 1427 aa4.63□□□□□ -1.67
SMC6-208ENST00000481708 TREHO43280 583 aa4.63□□□□□ -1.67
SMC6-208ENST00000481708 DSC3Q14574 896 aa4.63□□□□□ -1.67
SMC6-208ENST00000481708 TMEM87AQ8NBN3 555 aa4.63□□□□□ -1.67
SMC6-208ENST00000481708 STAC3Q96MF2 364 aa4.63□□□□□ -1.67
SMC6-208ENST00000481708 NUDT12Q9BQG2 462 aa4.63□□□□□ -1.67
SMC6-208ENST00000481708 CFHR5Q9BXR6 569 aa4.63□□□□□ -1.67
SMC6-208ENST00000481708 C1orf167Q5SNV9 1468 aa4.63□□□□□ -1.67
SMC6-208ENST00000481708 FGRP09769 529 aa4.63□□□□□ -1.67
SMC6-208ENST00000481708 CTHP32929 405 aa4.63□□□□□ -1.67
SMC6-208ENST00000481708 EFCAB2Q5VUJ9 269 aa4.63□□□□□ -1.67
SMC6-208ENST00000481708 PTCRAQ6ISU1 281 aaPredicted RBP4.63□□□□□ -1.67
SMC6-208ENST00000481708 GLYCTKQ8IVS8 523 aa4.63□□□□□ -1.67
SMC6-208ENST00000481708 KCTD12Q96CX2 325 aaKnown RBP4.63□□□□□ -1.67
SMC6-208ENST00000481708 ATP7BP35670 1465 aa4.63□□□□□ -1.67
SMC6-208ENST00000481708 EIF4G2P78344 907 aaKnown RBP eCLIP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms