RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 UTP14AQ9BVJ6 771 aaKnown RBP22.97■■□□□ 1.27
RXRB-203ENST00000481441 BBOX1O75936 387 aa22.96■■□□□ 1.27
RXRB-203ENST00000481441 DPP8Q6V1X1 898 aaPredicted RBP22.96■■□□□ 1.27
RXRB-203ENST00000481441 CDC37L1Q7L3B6 337 aa22.96■■□□□ 1.27
RXRB-203ENST00000481441 TRPM4Q8TD43 1214 aa22.96■■□□□ 1.27
RXRB-203ENST00000481441 ZNF408Q9H9D4 720 aa22.96■■□□□ 1.27
RXRB-203ENST00000481441 RAD17O75943 681 aa22.95■■□□□ 1.26
RXRB-203ENST00000481441 TNIP1Q15025 636 aa22.95■■□□□ 1.26
RXRB-203ENST00000481441 MPNDQ8N594 471 aa22.95■■□□□ 1.26
RXRB-203ENST00000481441 CFAP44Q96MT7 982 aa22.95■■□□□ 1.26
RXRB-203ENST00000481441 BCL2L13Q9BXK5 485 aa22.95■■□□□ 1.26
RXRB-203ENST00000481441 DGKZQ13574 1117 aa22.94■■□□□ 1.26
RXRB-203ENST00000481441 PDIA6Q15084 440 aa22.94■■□□□ 1.26
RXRB-203ENST00000481441 PLEKHF1Q96S99 279 aa22.94■■□□□ 1.26
RXRB-203ENST00000481441 ZIC5Q96T25 663 aa22.94■■□□□ 1.26
RXRB-203ENST00000481441 TAF1P21675 1872 aa22.93■■□□□ 1.26
RXRB-203ENST00000481441 NEFMP07197 916 aa22.93■■□□□ 1.26
RXRB-203ENST00000481441 NOGQ13253 232 aa22.93■■□□□ 1.26
RXRB-203ENST00000481441 DUOX1Q9NRD9 1551 aa22.93■■□□□ 1.26
RXRB-203ENST00000481441 SHTN1A0MZ66 631 aa22.92■■□□□ 1.26
RXRB-203ENST00000481441 YDJCA8MPS7 323 aa22.92■■□□□ 1.26
RXRB-203ENST00000481441 NFE2L2Q16236 605 aa22.92■■□□□ 1.26
RXRB-203ENST00000481441 CNOT7Q9UIV1 285 aaKnown RBP22.92■■□□□ 1.26
RXRB-203ENST00000481441 PDE4DIPQ5VU43 2346 aa22.92■■□□□ 1.26
RXRB-203ENST00000481441 PCDH10Q9P2E7 1040 aa22.91■■□□□ 1.26
RXRB-203ENST00000481441 LRRC37AA6NMS7 1700 aa22.91■■□□□ 1.26
RXRB-203ENST00000481441 POLR2AP24928 1970 aaKnown RBP22.9■■□□□ 1.26
RXRB-203ENST00000481441 PROSER3Q2NL68 480 aa22.9■■□□□ 1.26
RXRB-203ENST00000481441 USP48Q86UV5 1035 aa22.9■■□□□ 1.26
RXRB-203ENST00000481441 HCLS1P14317 486 aaPredicted RBP22.89■■□□□ 1.26
RXRB-203ENST00000481441 HUNKP57058 714 aa22.89■■□□□ 1.26
RXRB-203ENST00000481441 DLK2Q6UY11 383 aa22.89■■□□□ 1.26
RXRB-203ENST00000481441 NLRP10Q86W26 655 aa22.89■■□□□ 1.26
RXRB-203ENST00000481441 MICALL2Q8IY33 904 aa22.89■■□□□ 1.26
RXRB-203ENST00000481441 H7C1D1 291 aa22.88■■□□□ 1.25
RXRB-203ENST00000481441 ANXA1P04083 346 aa22.88■■□□□ 1.25
RXRB-203ENST00000481441 GRAPQ13588 217 aa22.88■■□□□ 1.25
RXRB-203ENST00000481441 DDX46Q7L014 1031 aaKnown RBP22.88■■□□□ 1.25
RXRB-203ENST00000481441 GRAPLQ8TC17 118 aaPredicted RBP22.88■■□□□ 1.25
RXRB-203ENST00000481441 FAM155AB1AL88 458 aaPredicted RBP22.87■■□□□ 1.25
RXRB-203ENST00000481441 EIF2S2P20042 333 aaKnown RBP22.87■■□□□ 1.25
RXRB-203ENST00000481441 DPF2Q92785 391 aa22.87■■□□□ 1.25
RXRB-203ENST00000481441 HSP90AB3PQ58FF7 597 aa22.86■■□□□ 1.25
RXRB-203ENST00000481441 TSPYL4Q9UJ04 414 aa22.86■■□□□ 1.25
RXRB-203ENST00000481441 ZBTB12Q9Y330 459 aaPredicted RBP22.86■■□□□ 1.25
RXRB-203ENST00000481441 SAMD7Q7Z3H4 446 aa22.85■■□□□ 1.25
RXRB-203ENST00000481441 TMC4Q7Z404 712 aa22.85■■□□□ 1.25
RXRB-203ENST00000481441 TNRC18O15417 2968 aaPredicted RBP22.85■■□□□ 1.25
RXRB-203ENST00000481441 RGMBQ6NW40 437 aa22.84■■□□□ 1.25
RXRB-203ENST00000481441 COPS6Q7L5N1 327 aa22.84■■□□□ 1.25
RXRB-203ENST00000481441 TRMT112Q9UI30 125 aaKnown RBP22.84■■□□□ 1.25
RXRB-203ENST00000481441 SH3TC1Q8TE82 1336 aa22.84■■□□□ 1.25
RXRB-203ENST00000481441 DDX60Q8IY21 1712 aaKnown RBP22.84■■□□□ 1.25
RXRB-203ENST00000481441 PSMD14O00487 310 aa22.83■■□□□ 1.25
RXRB-203ENST00000481441 EGFRP00533 1210 aa22.83■■□□□ 1.25
RXRB-203ENST00000481441 TCIRG1Q13488 830 aa22.83■■□□□ 1.25
RXRB-203ENST00000481441 KRT26Q7Z3Y9 468 aa22.83■■□□□ 1.25
RXRB-203ENST00000481441 GBA2Q9HCG7 927 aaPredicted RBP22.83■■□□□ 1.25
RXRB-203ENST00000481441 SAGE1Q9NXZ1 904 aa22.83■■□□□ 1.25
RXRB-203ENST00000481441 AKAP11Q9UKA4 1901 aa22.83■■□□□ 1.25
RXRB-203ENST00000481441 TBC1D10BQ4KMP7 808 aaPredicted RBP22.82■■□□□ 1.24
RXRB-203ENST00000481441 XAGE3Q8WTP9 111 aa22.82■■□□□ 1.24
RXRB-203ENST00000481441 MAPK8IP3Q9UPT6 1336 aa22.82■■□□□ 1.24
RXRB-203ENST00000481441 KIF23Q02241 960 aaPredicted RBP22.82■■□□□ 1.24
RXRB-203ENST00000481441 AIMP1Q12904 312 aaKnown RBP22.82■■□□□ 1.24
RXRB-203ENST00000481441 CCDC102AQ96A19 550 aa22.82■■□□□ 1.24
RXRB-203ENST00000481441 ADM5C9JUS6 153 aa22.81■■□□□ 1.24
RXRB-203ENST00000481441 WASHC4Q2M389 1173 aa22.81■■□□□ 1.24
RXRB-203ENST00000481441 C2orf69Q8N8R5 385 aa22.81■■□□□ 1.24
RXRB-203ENST00000481441 DBNDD1Q9H9R9 158 aa22.81■■□□□ 1.24
RXRB-203ENST00000481441 BABAM1Q9NWV8 329 aa22.81■■□□□ 1.24
RXRB-203ENST00000481441 RPS12P25398 132 aaKnown RBP22.8■■□□□ 1.24
RXRB-203ENST00000481441 PNNQ9H307 717 aaKnown RBP22.8■■□□□ 1.24
RXRB-203ENST00000481441 RNF186Q9NXI6 227 aa22.8■■□□□ 1.24
RXRB-203ENST00000481441 COL4A1P02462 1669 aa22.79■■□□□ 1.24
RXRB-203ENST00000481441 NECTIN2Q92692 538 aa22.79■■□□□ 1.24
RXRB-203ENST00000481441 CELF1Q92879 486 aaKnown RBP22.79■■□□□ 1.24
RXRB-203ENST00000481441 DCPSQ96C86 337 aaKnown RBP22.79■■□□□ 1.24
RXRB-203ENST00000481441 NSFL1CQ9UNZ2 370 aaKnown RBP22.79■■□□□ 1.24
RXRB-203ENST00000481441 RTL9Q8NET4 1388 aa22.78■■□□□ 1.24
RXRB-203ENST00000481441 TRPA1O75762 1119 aa22.78■■□□□ 1.24
RXRB-203ENST00000481441 ZNF157P51786 506 aaPredicted RBP22.78■■□□□ 1.24
RXRB-203ENST00000481441 SOX10P56693 466 aa22.78■■□□□ 1.24
RXRB-203ENST00000481441 KCNQ5Q9NR82 932 aa22.78■■□□□ 1.24
RXRB-203ENST00000481441 POLLQ9UGP5 575 aa22.78■■□□□ 1.24
RXRB-203ENST00000481441 SCN9AQ15858 1988 aa22.77■■□□□ 1.24
RXRB-203ENST00000481441 RIMBP2O15034 1052 aa22.77■■□□□ 1.24
RXRB-203ENST00000481441 SF3B3Q15393 1217 aaKnown RBP22.77■■□□□ 1.24
RXRB-203ENST00000481441 RBM26Q5T8P6 1007 aaKnown RBP22.77■■□□□ 1.24
RXRB-203ENST00000481441 ZNF428Q96B54 188 aa22.77■■□□□ 1.24
RXRB-203ENST00000481441 ECE2O60344 883 aa22.76■■□□□ 1.23
RXRB-203ENST00000481441 SLC10A3P09131 477 aa22.76■■□□□ 1.23
RXRB-203ENST00000481441 RIPK4P57078 832 aa22.76■■□□□ 1.23
RXRB-203ENST00000481441 GPSM2P81274 684 aa22.76■■□□□ 1.23
RXRB-203ENST00000481441 C6orf229H3BNL8 230 aa22.75■■□□□ 1.23
RXRB-203ENST00000481441 DOK7Q18PE1 504 aa22.75■■□□□ 1.23
RXRB-203ENST00000481441 CSRNP1Q96S65 589 aa22.75■■□□□ 1.23
RXRB-203ENST00000481441 KIF4BQ2VIQ3 1234 aa22.74■■□□□ 1.23
RXRB-203ENST00000481441 FAM89AQ96GI7 184 aa22.74■■□□□ 1.23
RXRB-203ENST00000481441 SULF1Q8IWU6 871 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms