RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 GSX2Q9BZM3 304 aa14.65□□□□□ -0.06
CUL3-209ENST00000481135 ABI2Q9NYB9 513 aaPredicted RBP14.65□□□□□ -0.06
CUL3-209ENST00000481135 PHACTR2O75167 634 aa14.64□□□□□ -0.07
CUL3-209ENST00000481135 PRPF40AO75400 957 aaKnown RBP14.64□□□□□ -0.07
CUL3-209ENST00000481135 NANOS1Q8WY41 292 aaKnown RBP14.64□□□□□ -0.07
CUL3-209ENST00000481135 EIF1AYO14602 144 aaKnown RBP14.63□□□□□ -0.07
CUL3-209ENST00000481135 FGFR3P22607 806 aa14.63□□□□□ -0.07
CUL3-209ENST00000481135 ORC1Q13415 861 aa14.63□□□□□ -0.07
CUL3-209ENST00000481135 FAM182BQ5T319 152 aa14.63□□□□□ -0.07
CUL3-209ENST00000481135 STRN4Q9NRL3 753 aa14.63□□□□□ -0.07
CUL3-209ENST00000481135 SASH3O75995 380 aa14.62□□□□□ -0.07
CUL3-209ENST00000481135 SPEM2Q0P670 501 aa14.62□□□□□ -0.07
CUL3-209ENST00000481135 FBF1Q8TES7 1133 aa14.62□□□□□ -0.07
CUL3-209ENST00000481135 TMEM63CQ9P1W3 806 aa14.62□□□□□ -0.07
CUL3-209ENST00000481135 POTECB2RU33 542 aa14.61□□□□□ -0.07
CUL3-209ENST00000481135 CD33P20138 364 aa14.61□□□□□ -0.07
CUL3-209ENST00000481135 XPCQ01831 940 aaPredicted RBP14.61□□□□□ -0.07
CUL3-209ENST00000481135 KRT25Q7Z3Z0 450 aa14.61□□□□□ -0.07
CUL3-209ENST00000481135 NPAS3Q8IXF0 933 aa14.61□□□□□ -0.07
CUL3-209ENST00000481135 NXF1Q9UBU9 619 aaKnown RBP14.61□□□□□ -0.07
CUL3-209ENST00000481135 FOXD3Q9UJU5 478 aaPredicted RBP14.61□□□□□ -0.07
CUL3-209ENST00000481135 RARAP10276 462 aa14.6□□□□□ -0.07
CUL3-209ENST00000481135 ZFYVE28Q9HCC9 887 aa14.6□□□□□ -0.07
CUL3-209ENST00000481135 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.6□□□□□ -0.07
CUL3-209ENST00000481135 MRRFQ96E11 262 aaKnown RBP14.59□□□□□ -0.07
CUL3-209ENST00000481135 TARSP26639 723 aaKnown RBP14.58□□□□□ -0.08
CUL3-209ENST00000481135 TAGLNQ01995 201 aaKnown RBP14.58□□□□□ -0.08
CUL3-209ENST00000481135 PRR12Q9ULL5 1215 aa14.58□□□□□ -0.08
CUL3-209ENST00000481135 GPR25O00155 361 aa14.57□□□□□ -0.08
CUL3-209ENST00000481135 NFKB1P19838 968 aa14.57□□□□□ -0.08
CUL3-209ENST00000481135 CES1P23141 567 aa14.57□□□□□ -0.08
CUL3-209ENST00000481135 BHMTQ93088 406 aa14.57□□□□□ -0.08
CUL3-209ENST00000481135 PHF20L1A8MW92 1017 aa14.56□□□□□ -0.08
CUL3-209ENST00000481135 PSAPP07602 524 aa14.56□□□□□ -0.08
CUL3-209ENST00000481135 C1orf127Q8N9H9 656 aa14.56□□□□□ -0.08
CUL3-209ENST00000481135 FRMD6Q96NE9 622 aa14.56□□□□□ -0.08
CUL3-209ENST00000481135 DUSP9Q99956 384 aaKnown RBP14.56□□□□□ -0.08
CUL3-209ENST00000481135 WWC3Q9ULE0 1092 aa14.56□□□□□ -0.08
CUL3-209ENST00000481135 UNCXA6NJT0 531 aa14.55□□□□□ -0.08
CUL3-209ENST00000481135 MAP3K6O95382 1288 aa14.55□□□□□ -0.08
CUL3-209ENST00000481135 SLC30A3Q99726 388 aa14.55□□□□□ -0.08
CUL3-209ENST00000481135 OR13H1Q8NG92 308 aa14.54□□□□□ -0.08
CUL3-209ENST00000481135 MRS2Q9HD23 443 aa14.54□□□□□ -0.08
CUL3-209ENST00000481135 NLRP2Q9NX02 1062 aa14.54□□□□□ -0.08
CUL3-209ENST00000481135 CNTN3Q9P232 1028 aa14.54□□□□□ -0.08
CUL3-209ENST00000481135 PARP2Q9UGN5 583 aa14.54□□□□□ -0.08
CUL3-209ENST00000481135 NSFL1CQ9UNZ2 370 aaKnown RBP14.54□□□□□ -0.08
CUL3-209ENST00000481135 MMP20O60882 483 aa14.53□□□□□ -0.08
CUL3-209ENST00000481135 BMP4P12644 408 aa14.53□□□□□ -0.08
CUL3-209ENST00000481135 CTBSQ01459 385 aa14.53□□□□□ -0.08
CUL3-209ENST00000481135 CCDC74AQ96AQ1 378 aa14.53□□□□□ -0.08
CUL3-209ENST00000481135 TLR7Q9NYK1 1049 aaKnown RBP14.53□□□□□ -0.08
CUL3-209ENST00000481135 MX2P20592 715 aa14.52□□□□□ -0.09
CUL3-209ENST00000481135 SOX18P35713 384 aa14.52□□□□□ -0.09
CUL3-209ENST00000481135 PSMD2Q13200 908 aa14.52□□□□□ -0.09
CUL3-209ENST00000481135 GRIN2CQ14957 1233 aa14.52□□□□□ -0.09
CUL3-209ENST00000481135 ZNF787Q6DD87 383 aa14.52□□□□□ -0.09
CUL3-209ENST00000481135 ZFATQ9P243 1243 aa14.52□□□□□ -0.09
CUL3-209ENST00000481135 HCN2Q9UL51 889 aa14.52□□□□□ -0.09
CUL3-209ENST00000481135 SPG7Q9UQ90 795 aa14.52□□□□□ -0.09
CUL3-209ENST00000481135 VAMP1P23763 118 aa14.51□□□□□ -0.09
CUL3-209ENST00000481135 PLAURQ03405 335 aa14.51□□□□□ -0.09
CUL3-209ENST00000481135 CHRDQ9H2X0 955 aa14.51□□□□□ -0.09
CUL3-209ENST00000481135 EREGO14944 169 aa14.5□□□□□ -0.09
CUL3-209ENST00000481135 EDN3P14138 238 aa14.5□□□□□ -0.09
CUL3-209ENST00000481135 GNA15P30679 374 aa14.5□□□□□ -0.09
CUL3-209ENST00000481135 PCSK7Q16549 785 aa14.5□□□□□ -0.09
CUL3-209ENST00000481135 USPL1Q5W0Q7 1092 aa14.5□□□□□ -0.09
CUL3-209ENST00000481135 TMC4Q7Z404 712 aa14.5□□□□□ -0.09
CUL3-209ENST00000481135 RAB44Q7Z6P3 723 aaPredicted RBP14.5□□□□□ -0.09
CUL3-209ENST00000481135 GALNT12Q8IXK2 581 aa14.5□□□□□ -0.09
CUL3-209ENST00000481135 SLC16A10Q8TF71 515 aa14.5□□□□□ -0.09
CUL3-209ENST00000481135 SETDB2Q96T68 719 aa14.5□□□□□ -0.09
CUL3-209ENST00000481135 H3BM21 787 aa14.49□□□□□ -0.09
CUL3-209ENST00000481135 DAB2P98082 770 aa14.49□□□□□ -0.09
CUL3-209ENST00000481135 HYAL2Q12891 473 aa14.49□□□□□ -0.09
CUL3-209ENST00000481135 DHX32Q7L7V1 743 aaKnown RBP14.49□□□□□ -0.09
CUL3-209ENST00000481135 AVENQ9NQS1 362 aaPredicted RBP14.49□□□□□ -0.09
CUL3-209ENST00000481135 GIPC1O14908 333 aa14.48□□□□□ -0.09
CUL3-209ENST00000481135 SORBS3O60504 671 aa14.48□□□□□ -0.09
CUL3-209ENST00000481135 VEGFBP49765 207 aa14.48□□□□□ -0.09
CUL3-209ENST00000481135 ZNF468Q5VIY5 522 aaPredicted RBP14.48□□□□□ -0.09
CUL3-209ENST00000481135 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.47□□□□□ -0.09
CUL3-209ENST00000481135 KIAA1522Q9P206 1035 aaPredicted RBP14.47□□□□□ -0.09
CUL3-209ENST00000481135 CYP2E1P05181 493 aaPredicted RBP14.46□□□□□ -0.09
CUL3-209ENST00000481135 POLR3DP05423 398 aaPredicted RBP14.46□□□□□ -0.09
CUL3-209ENST00000481135 HOXD8P13378 290 aaPredicted RBP14.46□□□□□ -0.09
CUL3-209ENST00000481135 MAP2K3P46734 347 aa14.46□□□□□ -0.09
CUL3-209ENST00000481135 NRLP54845 237 aa14.46□□□□□ -0.09
CUL3-209ENST00000481135 SYT9Q86SS6 491 aa14.46□□□□□ -0.09
CUL3-209ENST00000481135 NCAPG2Q86XI2 1143 aa14.46□□□□□ -0.09
CUL3-209ENST00000481135 SPACA7Q96KW9 195 aa14.46□□□□□ -0.09
CUL3-209ENST00000481135 MBIPQ9NS73 344 aa14.46□□□□□ -0.09
CUL3-209ENST00000481135 KANSL3Q9P2N6 904 aa14.46□□□□□ -0.09
CUL3-209ENST00000481135 SIN3BO75182 1162 aa14.45□□□□□ -0.1
CUL3-209ENST00000481135 NPHS2Q9NP85 383 aa14.45□□□□□ -0.1
CUL3-209ENST00000481135 GADD45BO75293 160 aaPredicted RBP14.44□□□□□ -0.1
CUL3-209ENST00000481135 EPS8L3Q8TE67 593 aaKnown RBP14.44□□□□□ -0.1
CUL3-209ENST00000481135 PPP4R2Q9NY27 417 aa14.44□□□□□ -0.1
CUL3-209ENST00000481135 VTI1BQ9UEU0 232 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms