RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 PDE12Q6L8Q7 609 aaKnown RBP8.67□□□□□ -1.02
UPF3A-207ENST00000481131 FAM161BQ96MY7 647 aa8.67□□□□□ -1.02
UPF3A-207ENST00000481131 NUCKS1Q9H1E3 243 aaKnown RBP8.67□□□□□ -1.02
UPF3A-207ENST00000481131 ELP3Q9H9T3 547 aa8.67□□□□□ -1.02
UPF3A-207ENST00000481131 STRN4Q9NRL3 753 aa8.67□□□□□ -1.02
UPF3A-207ENST00000481131 PARP2Q9UGN5 583 aa8.67□□□□□ -1.02
UPF3A-207ENST00000481131 DCDC2BA2VCK2 349 aa8.66□□□□□ -1.02
UPF3A-207ENST00000481131 XYLBO75191 536 aa8.66□□□□□ -1.02
UPF3A-207ENST00000481131 RECKO95980 971 aa8.66□□□□□ -1.02
UPF3A-207ENST00000481131 EPB42P16452 691 aa8.66□□□□□ -1.02
UPF3A-207ENST00000481131 MRPL58Q14197 206 aaKnown RBP8.66□□□□□ -1.02
UPF3A-207ENST00000481131 GRIN2CQ14957 1233 aa8.66□□□□□ -1.02
UPF3A-207ENST00000481131 USPL1Q5W0Q7 1092 aa8.66□□□□□ -1.02
UPF3A-207ENST00000481131 ZNF438Q7Z4V0 828 aa8.66□□□□□ -1.02
UPF3A-207ENST00000481131 TTC16Q8NEE8 873 aa8.66□□□□□ -1.02
UPF3A-207ENST00000481131 NDFIP2Q9NV92 336 aa8.66□□□□□ -1.02
UPF3A-207ENST00000481131 FNDC3AQ9Y2H6 1198 aaKnown RBP8.66□□□□□ -1.02
UPF3A-207ENST00000481131 GSK3AP49840 483 aa8.65□□□□□ -1.02
UPF3A-207ENST00000481131 TNP2Q05952 138 aa8.65□□□□□ -1.02
UPF3A-207ENST00000481131 GAS6Q14393 721 aa8.65□□□□□ -1.02
UPF3A-207ENST00000481131 TRIM22Q8IYM9 498 aa8.65□□□□□ -1.02
UPF3A-207ENST00000481131 ZNF837Q96EG3 531 aaPredicted RBP8.65□□□□□ -1.02
UPF3A-207ENST00000481131 CHRDQ9H2X0 955 aa8.65□□□□□ -1.02
UPF3A-207ENST00000481131 PCDHGC4Q9Y5F7 938 aa8.65□□□□□ -1.02
UPF3A-207ENST00000481131 GPR25O00155 361 aa8.64□□□□□ -1.03
UPF3A-207ENST00000481131 BNIP3LO60238 219 aa8.64□□□□□ -1.03
UPF3A-207ENST00000481131 MAPTP10636 758 aaKnown RBP8.64□□□□□ -1.03
UPF3A-207ENST00000481131 ATP2B2Q01814 1243 aa8.64□□□□□ -1.03
UPF3A-207ENST00000481131 LDLRAD1Q5T700 205 aa8.64□□□□□ -1.03
UPF3A-207ENST00000481131 ALG1LQ6GMV1 187 aa8.64□□□□□ -1.03
UPF3A-207ENST00000481131 FIGNL1Q6PIW4 674 aa8.64□□□□□ -1.03
UPF3A-207ENST00000481131 SV2AQ7L0J3 742 aa8.64□□□□□ -1.03
UPF3A-207ENST00000481131 SNX29Q8TEQ0 813 aa8.64□□□□□ -1.03
UPF3A-207ENST00000481131 DNAJC25Q9H1X3 360 aa8.64□□□□□ -1.03
UPF3A-207ENST00000481131 CNTN3Q9P232 1028 aa8.64□□□□□ -1.03
UPF3A-207ENST00000481131 KCNH4Q9UQ05 1017 aa8.64□□□□□ -1.03
UPF3A-207ENST00000481131 KHNYNO15037 678 aaKnown RBP8.63□□□□□ -1.03
UPF3A-207ENST00000481131 CPNE3O75131 537 aaKnown RBP8.63□□□□□ -1.03
UPF3A-207ENST00000481131 DAB2P98082 770 aa8.63□□□□□ -1.03
UPF3A-207ENST00000481131 NLRP13Q86W25 1043 aa8.63□□□□□ -1.03
UPF3A-207ENST00000481131 WHAMMQ8TF30 809 aa8.63□□□□□ -1.03
UPF3A-207ENST00000481131 ZFYVE28Q9HCC9 887 aa8.63□□□□□ -1.03
UPF3A-207ENST00000481131 C11orf16Q9NQ32 467 aa8.63□□□□□ -1.03
UPF3A-207ENST00000481131 NEFLP07196 543 aa8.62□□□□□ -1.03
UPF3A-207ENST00000481131 TMC4Q7Z404 712 aa8.62□□□□□ -1.03
UPF3A-207ENST00000481131 C1orf127Q8N9H9 656 aa8.62□□□□□ -1.03
UPF3A-207ENST00000481131 FBF1Q8TES7 1133 aa8.62□□□□□ -1.03
UPF3A-207ENST00000481131 ABHD17AQ96GS6 310 aa8.62□□□□□ -1.03
UPF3A-207ENST00000481131 GSX2Q9BZM3 304 aa8.62□□□□□ -1.03
UPF3A-207ENST00000481131 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.62□□□□□ -1.03
UPF3A-207ENST00000481131 NISCHQ9Y2I1 1504 aa8.62□□□□□ -1.03
UPF3A-207ENST00000481131 H7C1W4 665 aa8.61□□□□□ -1.03
UPF3A-207ENST00000481131 PHACTR2O75167 634 aa8.61□□□□□ -1.03
UPF3A-207ENST00000481131 SASH3O75995 380 aa8.61□□□□□ -1.03
UPF3A-207ENST00000481131 IRS1P35568 1242 aa8.61□□□□□ -1.03
UPF3A-207ENST00000481131 LAMC2Q13753 1193 aa8.61□□□□□ -1.03
UPF3A-207ENST00000481131 PI16Q6UXB8 463 aa8.61□□□□□ -1.03
UPF3A-207ENST00000481131 ZFATQ9P243 1243 aa8.61□□□□□ -1.03
UPF3A-207ENST00000481131 EREGO14944 169 aa8.6□□□□□ -1.03
UPF3A-207ENST00000481131 CYP2E1P05181 493 aaPredicted RBP8.6□□□□□ -1.03
UPF3A-207ENST00000481131 POLR3DP05423 398 aaPredicted RBP8.6□□□□□ -1.03
UPF3A-207ENST00000481131 TARSP26639 723 aaKnown RBP8.6□□□□□ -1.03
UPF3A-207ENST00000481131 FGD1P98174 961 aa8.6□□□□□ -1.03
UPF3A-207ENST00000481131 XPCQ01831 940 aaPredicted RBP8.6□□□□□ -1.03
UPF3A-207ENST00000481131 CCINQ13939 588 aa8.6□□□□□ -1.03
UPF3A-207ENST00000481131 KRT25Q7Z3Z0 450 aa8.6□□□□□ -1.03
UPF3A-207ENST00000481131 EPS8L3Q8TE67 593 aaKnown RBP8.6□□□□□ -1.03
UPF3A-207ENST00000481131 GTPBP3Q969Y2 492 aaKnown RBP8.6□□□□□ -1.03
UPF3A-207ENST00000481131 CCDC74AQ96AQ1 378 aa8.6□□□□□ -1.03
UPF3A-207ENST00000481131 SLC30A3Q99726 388 aa8.6□□□□□ -1.03
UPF3A-207ENST00000481131 BACH2Q9BYV9 841 aa8.6□□□□□ -1.03
UPF3A-207ENST00000481131 ABI2Q9NYB9 513 aaPredicted RBP8.6□□□□□ -1.03
UPF3A-207ENST00000481131 CD33P20138 364 aa8.59□□□□□ -1.03
UPF3A-207ENST00000481131 GNA15P30679 374 aa8.59□□□□□ -1.03
UPF3A-207ENST00000481131 PSMD2Q13200 908 aa8.59□□□□□ -1.03
UPF3A-207ENST00000481131 TSNAXIP1Q2TAA8 658 aa8.59□□□□□ -1.03
UPF3A-207ENST00000481131 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.59□□□□□ -1.03
UPF3A-207ENST00000481131 TCF3P15923 654 aa8.58□□□□□ -1.04
UPF3A-207ENST00000481131 SPEM2Q0P670 501 aa8.58□□□□□ -1.04
UPF3A-207ENST00000481131 KCNMA1Q12791 1236 aa8.58□□□□□ -1.04
UPF3A-207ENST00000481131 ZNF385CQ66K41 422 aaPredicted RBP8.58□□□□□ -1.04
UPF3A-207ENST00000481131 GMCL1Q96IK5 515 aa8.58□□□□□ -1.04
UPF3A-207ENST00000481131 MARK1Q9P0L2 795 aa8.58□□□□□ -1.04
UPF3A-207ENST00000481131 SORBS3O60504 671 aa8.57□□□□□ -1.04
UPF3A-207ENST00000481131 MMP20O60882 483 aa8.57□□□□□ -1.04
UPF3A-207ENST00000481131 NFKB1P19838 968 aa8.57□□□□□ -1.04
UPF3A-207ENST00000481131 RAB44Q7Z6P3 723 aaPredicted RBP8.57□□□□□ -1.04
UPF3A-207ENST00000481131 GALNT12Q8IXK2 581 aa8.57□□□□□ -1.04
UPF3A-207ENST00000481131 NPHS2Q9NP85 383 aa8.57□□□□□ -1.04
UPF3A-207ENST00000481131 ATXN7L1Q9ULK2 861 aaPredicted RBP8.57□□□□□ -1.04
UPF3A-207ENST00000481131 SLURP2P0DP57 97 aa8.56□□□□□ -1.04
UPF3A-207ENST00000481131 TTC39BQ5VTQ0 682 aaPredicted RBP8.56□□□□□ -1.04
UPF3A-207ENST00000481131 OR13H1Q8NG92 308 aa8.56□□□□□ -1.04
UPF3A-207ENST00000481131 OSBPL7Q9BZF2 842 aa8.56□□□□□ -1.04
UPF3A-207ENST00000481131 MRS2Q9HD23 443 aa8.56□□□□□ -1.04
UPF3A-207ENST00000481131 KANSL3Q9P2N6 904 aa8.56□□□□□ -1.04
UPF3A-207ENST00000481131 VTI1BQ9UEU0 232 aa8.56□□□□□ -1.04
UPF3A-207ENST00000481131 CTSHP09668 335 aa8.55□□□□□ -1.04
UPF3A-207ENST00000481131 RARAP10276 462 aa8.55□□□□□ -1.04
UPF3A-207ENST00000481131 CES1P23141 567 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms