RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 AVENQ9NQS1 362 aaPredicted RBP10.39□□□□□ -0.75
LSM5-210ENST00000480956 EPHB1P54762 984 aa10.38□□□□□ -0.75
LSM5-210ENST00000480956 IFRD2Q12894 506 aaPredicted RBP10.38□□□□□ -0.75
LSM5-210ENST00000480956 COPRSQ9NQ92 184 aa10.38□□□□□ -0.75
LSM5-210ENST00000480956 POLIQ9UNA4 740 aa10.38□□□□□ -0.75
LSM5-210ENST00000480956 ALDH1L1O75891 902 aa10.38□□□□□ -0.75
LSM5-210ENST00000480956 PTPRNQ16849 979 aa10.38□□□□□ -0.75
LSM5-210ENST00000480956 PCGF5Q86SE9 256 aa10.38□□□□□ -0.75
LSM5-210ENST00000480956 PPM1EQ8WY54 764 aa10.38□□□□□ -0.75
LSM5-210ENST00000480956 ARPC5LQ9BPX5 153 aa10.38□□□□□ -0.75
LSM5-210ENST00000480956 EFR3BQ9Y2G0 817 aa10.38□□□□□ -0.75
LSM5-210ENST00000480956 ST13P50502 369 aaKnown RBP10.37□□□□□ -0.75
LSM5-210ENST00000480956 KIAA0825Q8IV33 1275 aa10.37□□□□□ -0.75
LSM5-210ENST00000480956 ZNF358Q9NW07 568 aa10.37□□□□□ -0.75
LSM5-210ENST00000480956 ACTN4O43707 911 aaKnown RBP10.36□□□□□ -0.75
LSM5-210ENST00000480956 NRDCO43847 1150 aa10.36□□□□□ -0.75
LSM5-210ENST00000480956 TKFCQ3LXA3 575 aa10.36□□□□□ -0.75
LSM5-210ENST00000480956 ATCAYQ86WG3 371 aa10.36□□□□□ -0.75
LSM5-210ENST00000480956 CHMP7Q8WUX9 453 aaPredicted RBP10.36□□□□□ -0.75
LSM5-210ENST00000480956 CCDC113Q9H0I3 377 aa10.36□□□□□ -0.75
LSM5-210ENST00000480956 MAP3K20Q9NYL2 800 aaKnown RBP10.36□□□□□ -0.75
LSM5-210ENST00000480956 SLC27A5Q9Y2P5 690 aa10.36□□□□□ -0.75
LSM5-210ENST00000480956 FGAP02671 866 aa10.36□□□□□ -0.75
LSM5-210ENST00000480956 TTF1Q15361 905 aaPredicted RBP10.36□□□□□ -0.75
LSM5-210ENST00000480956 TTC39BQ5VTQ0 682 aaPredicted RBP10.36□□□□□ -0.75
LSM5-210ENST00000480956 ATAD2Q6PL18 1390 aa10.35□□□□□ -0.75
LSM5-210ENST00000480956 EIF1AYO14602 144 aaKnown RBP10.35□□□□□ -0.75
LSM5-210ENST00000480956 PDE6BP35913 854 aa10.35□□□□□ -0.75
LSM5-210ENST00000480956 ORC1Q13415 861 aa10.35□□□□□ -0.75
LSM5-210ENST00000480956 SQSTM1Q13501 440 aa10.35□□□□□ -0.75
LSM5-210ENST00000480956 HLTFQ14527 1009 aaKnown RBP eCLIP10.35□□□□□ -0.75
LSM5-210ENST00000480956 PUS10Q3MIT2 529 aaKnown RBP10.35□□□□□ -0.75
LSM5-210ENST00000480956 TJAP1Q5JTD0 557 aa10.35□□□□□ -0.75
LSM5-210ENST00000480956 COX20Q5RI15 118 aa10.35□□□□□ -0.75
LSM5-210ENST00000480956 MORN1Q5T089 497 aa10.35□□□□□ -0.75
LSM5-210ENST00000480956 FAM43BQ6ZT52 329 aaPredicted RBP10.35□□□□□ -0.75
LSM5-210ENST00000480956 USB1Q9BQ65 265 aaKnown RBP10.35□□□□□ -0.75
LSM5-210ENST00000480956 PRKAG3Q9UGI9 489 aa10.35□□□□□ -0.75
LSM5-210ENST00000480956 OPLAHO14841 1288 aa10.34□□□□□ -0.75
LSM5-210ENST00000480956 ZNF500O60304 480 aaPredicted RBP10.34□□□□□ -0.75
LSM5-210ENST00000480956 BPNT1O95861 308 aa10.34□□□□□ -0.75
LSM5-210ENST00000480956 ZNF280DQ6N043 979 aa10.34□□□□□ -0.75
LSM5-210ENST00000480956 PAF1Q8N7H5 531 aa10.34□□□□□ -0.75
LSM5-210ENST00000480956 CHST12Q9NRB3 414 aa10.34□□□□□ -0.75
LSM5-210ENST00000480956 KBTBD4Q9NVX7 518 aa10.34□□□□□ -0.75
LSM5-210ENST00000480956 MSRB2Q9Y3D2 182 aa10.34□□□□□ -0.75
LSM5-210ENST00000480956 NBPF20Q3BBV1 942 aa10.33□□□□□ -0.76
LSM5-210ENST00000480956 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.33□□□□□ -0.76
LSM5-210ENST00000480956 NYAP1Q6ZVC0 841 aa10.33□□□□□ -0.76
LSM5-210ENST00000480956 ALG1L2C9J202 215 aa10.33□□□□□ -0.76
LSM5-210ENST00000480956 NPHP1O15259 732 aa10.33□□□□□ -0.76
LSM5-210ENST00000480956 ATF3P18847 181 aa10.33□□□□□ -0.76
LSM5-210ENST00000480956 BLOC1S3Q6QNY0 202 aa10.33□□□□□ -0.76
LSM5-210ENST00000480956 CPLX3Q8WVH0 158 aa10.33□□□□□ -0.76
LSM5-210ENST00000480956 ZNF516Q92618 1163 aa10.33□□□□□ -0.76
LSM5-210ENST00000480956 CASS4Q9NQ75 786 aa10.33□□□□□ -0.76
LSM5-210ENST00000480956 GINM1Q9NU53 330 aa10.33□□□□□ -0.76
LSM5-210ENST00000480956 ANAPC4Q9UJX5 808 aa10.33□□□□□ -0.76
LSM5-210ENST00000480956 LEMD3Q9Y2U8 911 aa10.33□□□□□ -0.76
LSM5-210ENST00000480956 GIPC1O14908 333 aa10.32□□□□□ -0.76
LSM5-210ENST00000480956 ZBTB39O15060 712 aa10.32□□□□□ -0.76
LSM5-210ENST00000480956 DNM1Q05193 864 aaKnown RBP10.32□□□□□ -0.76
LSM5-210ENST00000480956 TCEA2Q15560 299 aa10.32□□□□□ -0.76
LSM5-210ENST00000480956 EMID1Q96A84 441 aaPredicted RBP10.32□□□□□ -0.76
LSM5-210ENST00000480956 ANAPC16Q96DE5 110 aa10.32□□□□□ -0.76
LSM5-210ENST00000480956 MTRQ99707 1265 aa10.32□□□□□ -0.76
LSM5-210ENST00000480956 ZNF700Q9H0M5 742 aa10.32□□□□□ -0.76
LSM5-210ENST00000480956 DNAJC25Q9H1X3 360 aa10.32□□□□□ -0.76
LSM5-210ENST00000480956 PCDHB11Q9Y5F2 797 aa10.32□□□□□ -0.76
LSM5-210ENST00000480956 SCINQ9Y6U3 715 aa10.32□□□□□ -0.76
LSM5-210ENST00000480956 MAN1A1P33908 653 aa10.31□□□□□ -0.76
LSM5-210ENST00000480956 RAPGEF1Q13905 1077 aa10.31□□□□□ -0.76
LSM5-210ENST00000480956 RNF19BQ6ZMZ0 732 aa10.31□□□□□ -0.76
LSM5-210ENST00000480956 CFAP69A5D8W1 941 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 PMLP29590 882 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 CDC27P30260 824 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 SOX9P48436 509 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 LRRC41Q15345 812 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 CEP63Q96MT8 703 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 PAGR1Q9BTK6 254 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 FAM126AQ9BYI3 521 aaPredicted RBP10.3□□□□□ -0.76
LSM5-210ENST00000480956 OSBPL7Q9BZF2 842 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 FAM8A1Q9UBU6 413 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 KCNQ2O43526 872 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 ITGBL1O95965 494 aaPredicted RBP10.3□□□□□ -0.76
LSM5-210ENST00000480956 SCGB1D2O95969 90 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 JUNDP17535 347 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 COPS2P61201 443 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 KMT5BQ4FZB7 885 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 DALRD3Q5D0E6 543 aaKnown RBP10.3□□□□□ -0.76
LSM5-210ENST00000480956 C10orf62Q5T681 223 aaPredicted RBP10.3□□□□□ -0.76
LSM5-210ENST00000480956 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.3□□□□□ -0.76
LSM5-210ENST00000480956 TNS4Q8IZW8 715 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 PLAAQ9Y263 795 aa10.3□□□□□ -0.76
LSM5-210ENST00000480956 C2orf27AQ580R0 203 aa10.29□□□□□ -0.76
LSM5-210ENST00000480956 DDX42Q86XP3 938 aaKnown RBP eCLIP10.29□□□□□ -0.76
LSM5-210ENST00000480956 MYO1HQ8N1T3 1032 aa10.29□□□□□ -0.76
LSM5-210ENST00000480956 EDEM1Q92611 657 aa10.29□□□□□ -0.76
LSM5-210ENST00000480956 TSPAN10Q9H1Z9 355 aaPredicted RBP10.29□□□□□ -0.76
LSM5-210ENST00000480956 PCDHB3Q9Y5E6 796 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms