RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SEC63Q9UGP8 760 aaKnown RBP7.03□□□□□ -1.28
PRPF4B-205ENST00000480058 BICDL2A1A5D9 508 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 ANKRD18BA2A2Z9 1011 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 TRIM75PA6NK02 468 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 CAMK4Q16566 473 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 OTUD6BQ8N6M0 293 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 IDH1O75874 414 aaKnown RBP7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 PPP1R42Q7Z4L9 355 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 MLKLQ8NB16 471 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 BRF1Q92994 677 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 FERMT1Q9BQL6 677 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 RASAL2Q9UJF2 1139 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 CEP83Q9Y592 693 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 IFIT3O14879 490 aaKnown RBP7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 USP48Q86UV5 1035 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 NUTM1Q86Y26 1132 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 CCDC110Q8TBZ0 833 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 FBF1Q8TES7 1133 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 LRRC45Q96CN5 670 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 NAP1L4Q99733 375 aaKnown RBP7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 EHMT1Q9H9B1 1298 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 HOXA7P31268 230 aaPredicted RBP7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 PPFIA1Q13136 1202 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 BRD3Q15059 726 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 IQUBQ8NA54 791 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 ERMNQ8TAM6 284 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 JAKMIP2Q96AA8 810 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 IFT74Q96LB3 600 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 TESK2Q96S53 571 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 ZFYVE9O95405 1425 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 SYT1P21579 422 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 GTF2A1P52655 376 aaPredicted RBP7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 IKQ13123 557 aaPredicted RBP7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 NAA16Q6N069 864 aaPredicted RBP7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 RUFY4Q6ZNE9 571 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 NAP1L3Q99457 506 aaPredicted RBP7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 TFIP11Q9UBB9 837 aaKnown RBP7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 USH1CQ9Y6N9 552 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 KDM2BQ8NHM5 1336 aa7.02□□□□□ -1.29
PRPF4B-205ENST00000480058 ALDH3A1P30838 453 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 ACTN2P35609 894 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 MAP3K9P80192 1104 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 METTL24Q5JXM2 366 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 DHX32Q7L7V1 743 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 TMTC1Q8IUR5 882 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 BOLA2Q9H3K6 86 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 TRMT1Q9NXH9 659 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 LUC7L2Q9Y383 392 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 APBA1Q02410 837 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 CAVIN4Q5BKX8 364 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 MPNDQ8N594 471 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 MRFAP1L1Q96HT8 127 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 CCDC42Q96M95 316 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 PLCD4Q9BRC7 762 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 TSKSQ9UJT2 592 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 PPFIA4O75335 1185 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 GNAT2P19087 354 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 ARID4AP29374 1257 aaPredicted RBP7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 VWA3BQ502W6 1294 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 RNF187Q5TA31 235 aaPredicted RBP7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 FCHSD1Q86WN1 690 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 USP26Q9BXU7 913 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 RBM28Q9NW13 759 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 STIM2Q9P246 746 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 SBNO2Q9Y2G9 1366 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 SSBP05455 408 aaKnown RBP eCLIP7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 SF3B2Q13435 895 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 SPTY2D1Q68D10 685 aaPredicted RBP7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 CCDC121Q6ZUS5 278 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 ESR2Q92731 530 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 RAI14Q9P0K7 980 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 MTRF1LQ9UGC7 380 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 ASXL1Q8IXJ9 1541 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 VAMP4O75379 141 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 SLC5A1P13866 664 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 ANO6Q4KMQ2 910 aa7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 UTP14CQ5TAP6 766 aaKnown RBP7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 TTC12Q9H892 705 aaPredicted RBP7.01□□□□□ -1.29
PRPF4B-205ENST00000480058 ZBTB43O43298 467 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 NT5C2P49902 561 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 METAP2P50579 478 aaKnown RBP eCLIP7□□□□□ -1.29
PRPF4B-205ENST00000480058 PDE4BQ07343 736 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 GIMAP6Q6P9H5 292 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 PANK2Q9BZ23 570 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 NUCKS1Q9H1E3 243 aaKnown RBP7□□□□□ -1.29
PRPF4B-205ENST00000480058 MBIPQ9NS73 344 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 ZMYM4Q5VZL5 1548 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 NDC80O14777 642 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 BRD1O95696 1058 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 CCDC40Q4G0X9 1142 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 KLHL10Q6JEL2 608 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 ANKLE2Q86XL3 938 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 PPFIBP2Q8ND30 876 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 SREK1Q8WXA9 508 aaKnown RBP7□□□□□ -1.29
PRPF4B-205ENST00000480058 RBM8AQ9Y5S9 174 aaKnown RBP7□□□□□ -1.29
PRPF4B-205ENST00000480058 MCMDC2Q4G0Z9 681 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 CCDC84Q86UT8 332 aaPredicted RBP7□□□□□ -1.29
PRPF4B-205ENST00000480058 STK11IPQ8N1F8 1099 aa7□□□□□ -1.29
PRPF4B-205ENST00000480058 MRPL50Q8N5N7 158 aaKnown RBP7□□□□□ -1.29
PRPF4B-205ENST00000480058 FAM76AQ8TAV0 307 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms