RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 NECTIN2Q92692 538 aa15.92■□□□□ 0.14
C9orf78-205ENST00000480023 TSPYL1Q9H0U9 437 aa15.92■□□□□ 0.14
C9orf78-205ENST00000480023 IMPACTQ9P2X3 320 aa15.92■□□□□ 0.14
C9orf78-205ENST00000480023 USP16Q9Y5T5 823 aa15.92■□□□□ 0.14
C9orf78-205ENST00000480023 ST7Q9NRC1 585 aa15.91■□□□□ 0.14
C9orf78-205ENST00000480023 MYH15Q9Y2K3 1946 aa15.91■□□□□ 0.14
C9orf78-205ENST00000480023 COL9A3Q14050 684 aaPredicted RBP15.91■□□□□ 0.14
C9orf78-205ENST00000480023 BEND3Q5T5X7 828 aa15.91■□□□□ 0.14
C9orf78-205ENST00000480023 HDGFL1Q5TGJ6 251 aa15.91■□□□□ 0.14
C9orf78-205ENST00000480023 DDX54Q8TDD1 881 aaKnown RBP15.91■□□□□ 0.14
C9orf78-205ENST00000480023 IPO4Q8TEX9 1081 aaKnown RBP15.91■□□□□ 0.14
C9orf78-205ENST00000480023 PHAXQ9H814 394 aaKnown RBP15.91■□□□□ 0.14
C9orf78-205ENST00000480023 HMG20BQ9P0W2 317 aa15.91■□□□□ 0.14
C9orf78-205ENST00000480023 MED23Q9ULK4 1368 aa15.9■□□□□ 0.14
C9orf78-205ENST00000480023 ACEP12821 1306 aa15.9■□□□□ 0.14
C9orf78-205ENST00000480023 PSDA5PKW4 1024 aaPredicted RBP15.9■□□□□ 0.14
C9orf78-205ENST00000480023 EYA1Q99502 592 aa15.9■□□□□ 0.14
C9orf78-205ENST00000480023 ANO10Q9NW15 660 aa15.9■□□□□ 0.14
C9orf78-205ENST00000480023 TRMT1Q9NXH9 659 aaKnown RBP15.9■□□□□ 0.14
C9orf78-205ENST00000480023 ERICH4A6NGS2 130 aa15.89■□□□□ 0.13
C9orf78-205ENST00000480023 BECN2A8MW95 431 aa15.89■□□□□ 0.13
C9orf78-205ENST00000480023 PDE4CQ08493 712 aa15.89■□□□□ 0.13
C9orf78-205ENST00000480023 SNW1Q13573 536 aaKnown RBP15.89■□□□□ 0.13
C9orf78-205ENST00000480023 DHX8Q14562 1220 aaKnown RBP15.89■□□□□ 0.13
C9orf78-205ENST00000480023 TAF7Q15545 349 aaPredicted RBP15.89■□□□□ 0.13
C9orf78-205ENST00000480023 FILIP1Q7Z7B0 1213 aa15.89■□□□□ 0.13
C9orf78-205ENST00000480023 ERC1Q8IUD2 1116 aa15.89■□□□□ 0.13
C9orf78-205ENST00000480023 GTF3C6Q969F1 213 aa15.89■□□□□ 0.13
C9orf78-205ENST00000480023 NAP1L2Q9ULW6 460 aaPredicted RBP15.89■□□□□ 0.13
C9orf78-205ENST00000480023 CAPN2P17655 700 aa15.89■□□□□ 0.13
C9orf78-205ENST00000480023 CLCN6P51797 869 aa15.89■□□□□ 0.13
C9orf78-205ENST00000480023 NMIQ13287 307 aaPredicted RBP15.89■□□□□ 0.13
C9orf78-205ENST00000480023 E4F1Q66K89 784 aaPredicted RBP15.89■□□□□ 0.13
C9orf78-205ENST00000480023 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.89■□□□□ 0.13
C9orf78-205ENST00000480023 RCOR1Q9UKL0 485 aa15.89■□□□□ 0.13
C9orf78-205ENST00000480023 ZRANB2O95218 330 aaKnown RBP eCLIP15.88■□□□□ 0.13
C9orf78-205ENST00000480023 PNMA6AP0CW24 399 aaPredicted RBP15.88■□□□□ 0.13
C9orf78-205ENST00000480023 ERCC6LQ2NKX8 1250 aa15.88■□□□□ 0.13
C9orf78-205ENST00000480023 NBPF11Q86T75 865 aa15.88■□□□□ 0.13
C9orf78-205ENST00000480023 FAM227BQ96M60 508 aa15.88■□□□□ 0.13
C9orf78-205ENST00000480023 PTPRUQ92729 1446 aa15.88■□□□□ 0.13
C9orf78-205ENST00000480023 ADD1P35611 737 aaKnown RBP15.88■□□□□ 0.13
C9orf78-205ENST00000480023 OS9Q13438 667 aaPredicted RBP15.88■□□□□ 0.13
C9orf78-205ENST00000480023 CCDC150Q8NCX0 1101 aa15.88■□□□□ 0.13
C9orf78-205ENST00000480023 IL17REQ8NFR9 667 aa15.88■□□□□ 0.13
C9orf78-205ENST00000480023 DNAAF4Q8WXU2 420 aa15.88■□□□□ 0.13
C9orf78-205ENST00000480023 BRF1Q92994 677 aa15.88■□□□□ 0.13
C9orf78-205ENST00000480023 PPP1R13BQ96KQ4 1090 aa15.88■□□□□ 0.13
C9orf78-205ENST00000480023 HOXB7P09629 217 aa15.87■□□□□ 0.13
C9orf78-205ENST00000480023 IFIT2P09913 472 aaKnown RBP15.87■□□□□ 0.13
C9orf78-205ENST00000480023 PLA2G4AP47712 749 aa15.87■□□□□ 0.13
C9orf78-205ENST00000480023 CEP57L1Q8IYX8 460 aa15.87■□□□□ 0.13
C9orf78-205ENST00000480023 ENGASEQ8NFI3 743 aa15.87■□□□□ 0.13
C9orf78-205ENST00000480023 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.87■□□□□ 0.131e-8■■□□□ 13
C9orf78-205ENST00000480023 ATL3Q6DD88 541 aa15.86■□□□□ 0.13
C9orf78-205ENST00000480023 NWD1Q149M9 1564 aa15.86■□□□□ 0.13
C9orf78-205ENST00000480023 ATP8B1O43520 1251 aa15.86■□□□□ 0.13
C9orf78-205ENST00000480023 JAK2O60674 1132 aa15.86■□□□□ 0.13
C9orf78-205ENST00000480023 KRT32Q14532 448 aa15.86■□□□□ 0.13
C9orf78-205ENST00000480023 USPL1Q5W0Q7 1092 aa15.86■□□□□ 0.13
C9orf78-205ENST00000480023 CCAR1Q8IX12 1150 aaKnown RBP15.86■□□□□ 0.13
C9orf78-205ENST00000480023 TCEANC2Q96MN5 208 aa15.86■□□□□ 0.13
C9orf78-205ENST00000480023 NAT10Q9H0A0 1025 aaKnown RBP15.86■□□□□ 0.13
C9orf78-205ENST00000480023 MED1Q15648 1581 aaPredicted RBP15.85■□□□□ 0.13
C9orf78-205ENST00000480023 A0A0D9SFI3 127 aa15.85■□□□□ 0.13
C9orf78-205ENST00000480023 HNRNPH2P55795 449 aaKnown RBP15.85■□□□□ 0.13
C9orf78-205ENST00000480023 FAM160A1Q05DH4 1040 aa15.85■□□□□ 0.13
C9orf78-205ENST00000480023 NAA16Q6N069 864 aaPredicted RBP15.85■□□□□ 0.13
C9orf78-205ENST00000480023 SMARCC2Q8TAQ2 1214 aa15.85■□□□□ 0.13
C9orf78-205ENST00000480023 BPIFA3Q9BQP9 254 aa15.85■□□□□ 0.13
C9orf78-205ENST00000480023 CHMP4AQ9BY43 222 aa15.85■□□□□ 0.13
C9orf78-205ENST00000480023 UBXN6Q9BZV1 441 aa15.85■□□□□ 0.13
C9orf78-205ENST00000480023 BCL11BQ9C0K0 894 aaPredicted RBP15.85■□□□□ 0.13
C9orf78-205ENST00000480023 GOLPH3LQ9H4A5 285 aa15.85■□□□□ 0.13
C9orf78-205ENST00000480023 TAF6LQ9Y6J9 622 aa15.85■□□□□ 0.13
C9orf78-205ENST00000480023 DIP2AQ14689 1571 aa15.85■□□□□ 0.13
C9orf78-205ENST00000480023 PHLPP2Q6ZVD8 1323 aa15.85■□□□□ 0.13
C9orf78-205ENST00000480023 MUM1L1Q5H9M0 696 aa15.85■□□□□ 0.13
C9orf78-205ENST00000480023 CCDC73Q6ZRK6 1079 aa15.85■□□□□ 0.13
C9orf78-205ENST00000480023 ARGLU1Q9NWB6 273 aaPredicted RBP15.85■□□□□ 0.13
C9orf78-205ENST00000480023 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.85■□□□□ 0.13
C9orf78-205ENST00000480023 VGLL3A8MV65 326 aa15.84■□□□□ 0.13
C9orf78-205ENST00000480023 H3BQV1 296 aa15.84■□□□□ 0.13
C9orf78-205ENST00000480023 KINO60870 393 aaKnown RBP15.84■□□□□ 0.13
C9orf78-205ENST00000480023 ARHGAP29Q52LW3 1261 aa15.84■□□□□ 0.13
C9orf78-205ENST00000480023 IFFO2Q5TF58 517 aa15.84■□□□□ 0.13
C9orf78-205ENST00000480023 LRRN4CLQ8ND94 238 aa15.84■□□□□ 0.13
C9orf78-205ENST00000480023 LLPHQ9BRT6 129 aaKnown RBP15.84■□□□□ 0.13
C9orf78-205ENST00000480023 SRRTQ9BXP5 876 aaKnown RBP15.84■□□□□ 0.13
C9orf78-205ENST00000480023 PI4KAP2A4QPH2 592 aa15.83■□□□□ 0.13
C9orf78-205ENST00000480023 TPM4P67936 248 aa15.83■□□□□ 0.13
C9orf78-205ENST00000480023 STK3Q13188 491 aa15.83■□□□□ 0.13
C9orf78-205ENST00000480023 TEX35Q5T0J7 233 aa15.83■□□□□ 0.13
C9orf78-205ENST00000480023 SYT10Q6XYQ8 523 aa15.83■□□□□ 0.13
C9orf78-205ENST00000480023 AACSQ86V21 672 aa15.83■□□□□ 0.13
C9orf78-205ENST00000480023 AOPEPQ8N6M6 819 aa15.83■□□□□ 0.13
C9orf78-205ENST00000480023 PI4KAP1Q8N8J0 262 aa15.83■□□□□ 0.13
C9orf78-205ENST00000480023 ORC3Q9UBD5 711 aaPredicted RBP15.83■□□□□ 0.13
C9orf78-205ENST00000480023 ABCC6O95255 1503 aa15.83■□□□□ 0.12
C9orf78-205ENST00000480023 AGLP35573 1532 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms