RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 SLC6A14Q9UN76 642 aa10.18□□□□□ -0.78
COMMD3-212ENST00000479958 FNDC3AQ9Y2H6 1198 aaKnown RBP10.18□□□□□ -0.78
COMMD3-212ENST00000479958 STARD13Q9Y3M8 1113 aa10.18□□□□□ -0.78
COMMD3-212ENST00000479958 LILRB5O75023 590 aa10.17□□□□□ -0.78
COMMD3-212ENST00000479958 SSFA2P28290 1259 aa10.17□□□□□ -0.78
COMMD3-212ENST00000479958 SUV39H2Q9H5I1 410 aa10.17□□□□□ -0.78
COMMD3-212ENST00000479958 USP20Q9Y2K6 914 aa10.17□□□□□ -0.78
COMMD3-212ENST00000479958 TNFRSF10BO14763 440 aa10.16□□□□□ -0.78
COMMD3-212ENST00000479958 GPAT2Q6NUI2 795 aa10.16□□□□□ -0.78
COMMD3-212ENST00000479958 DHX32Q7L7V1 743 aaKnown RBP10.16□□□□□ -0.78
COMMD3-212ENST00000479958 SEPT3Q9UH03 358 aa10.16□□□□□ -0.78
COMMD3-212ENST00000479958 ALBP02768 609 aa10.16□□□□□ -0.78
COMMD3-212ENST00000479958 COL8A1P27658 744 aa10.16□□□□□ -0.78
COMMD3-212ENST00000479958 ZAP70P43403 619 aa10.16□□□□□ -0.78
COMMD3-212ENST00000479958 ZFATQ9P243 1243 aa10.16□□□□□ -0.78
COMMD3-212ENST00000479958 RGS9O75916 674 aaPredicted RBP10.15□□□□□ -0.79
COMMD3-212ENST00000479958 PSAPP07602 524 aa10.15□□□□□ -0.79
COMMD3-212ENST00000479958 PDE4CQ08493 712 aa10.15□□□□□ -0.79
COMMD3-212ENST00000479958 PRRT3Q5FWE3 981 aa10.15□□□□□ -0.79
COMMD3-212ENST00000479958 C20orf204Q6ZNR8 217 aa10.15□□□□□ -0.79
COMMD3-212ENST00000479958 FAM35AQ86V20 835 aa10.15□□□□□ -0.79
COMMD3-212ENST00000479958 TRPM4Q8TD43 1214 aa10.15□□□□□ -0.79
COMMD3-212ENST00000479958 TLR7Q9NYK1 1049 aaKnown RBP10.15□□□□□ -0.79
COMMD3-212ENST00000479958 TIMELESSQ9UNS1 1208 aa10.15□□□□□ -0.79
COMMD3-212ENST00000479958 USTQ9Y2C2 406 aa10.15□□□□□ -0.79
COMMD3-212ENST00000479958 KCNMB2Q9Y691 235 aa10.15□□□□□ -0.79
COMMD3-212ENST00000479958 PLA2G4EQ3MJ16 856 aa10.14□□□□□ -0.79
COMMD3-212ENST00000479958 B4GALNT3Q6L9W6 998 aa10.14□□□□□ -0.79
COMMD3-212ENST00000479958 PSAPL1Q6NUJ1 521 aa10.14□□□□□ -0.79
COMMD3-212ENST00000479958 NLRP13Q86W25 1043 aa10.14□□□□□ -0.79
COMMD3-212ENST00000479958 TRIM11Q96F44 468 aa10.14□□□□□ -0.79
COMMD3-212ENST00000479958 UBAP1LF5GYI3 381 aa10.13□□□□□ -0.79
COMMD3-212ENST00000479958 RPLP1P05386 114 aaKnown RBP10.13□□□□□ -0.79
COMMD3-212ENST00000479958 NRLP54845 237 aa10.13□□□□□ -0.79
COMMD3-212ENST00000479958 TRIM28Q13263 835 aaKnown RBP10.13□□□□□ -0.79
COMMD3-212ENST00000479958 HELQQ8TDG4 1101 aa10.13□□□□□ -0.79
COMMD3-212ENST00000479958 NUDT8Q8WV74 236 aa10.13□□□□□ -0.79
COMMD3-212ENST00000479958 JPH1Q9HDC5 661 aaPredicted RBP10.13□□□□□ -0.79
COMMD3-212ENST00000479958 KRBA1A5PL33 1030 aa10.12□□□□□ -0.79
COMMD3-212ENST00000479958 MSTNO14793 375 aa10.12□□□□□ -0.79
COMMD3-212ENST00000479958 PCSK2P16519 638 aa10.12□□□□□ -0.79
COMMD3-212ENST00000479958 GPLD1P80108 840 aa10.12□□□□□ -0.79
COMMD3-212ENST00000479958 PLAURQ03405 335 aa10.12□□□□□ -0.79
COMMD3-212ENST00000479958 TRAPPC3LQ5T215 181 aa10.12□□□□□ -0.79
COMMD3-212ENST00000479958 TTC16Q8NEE8 873 aa10.12□□□□□ -0.79
COMMD3-212ENST00000479958 GPR152Q8TDT2 470 aa10.12□□□□□ -0.79
COMMD3-212ENST00000479958 SPATA31C1P0DKV0 1188 aa10.11□□□□□ -0.79
COMMD3-212ENST00000479958 CPB1P15086 417 aa10.11□□□□□ -0.79
COMMD3-212ENST00000479958 ELMSAN1Q6PJG2 1045 aa10.11□□□□□ -0.79
COMMD3-212ENST00000479958 C8orf86Q6ZUL3 223 aa10.11□□□□□ -0.79
COMMD3-212ENST00000479958 GTF3C2Q8WUA4 911 aaPredicted RBP10.11□□□□□ -0.79
COMMD3-212ENST00000479958 FRRS1LQ9P0K9 344 aa10.11□□□□□ -0.79
COMMD3-212ENST00000479958 ZBTB39O15060 712 aa10.1□□□□□ -0.79
COMMD3-212ENST00000479958 NOM1Q5C9Z4 860 aaKnown RBP10.1□□□□□ -0.79
COMMD3-212ENST00000479958 FAM26DQ5JW98 314 aa10.1□□□□□ -0.79
COMMD3-212ENST00000479958 TTC39BQ5VTQ0 682 aaPredicted RBP10.1□□□□□ -0.79
COMMD3-212ENST00000479958 ALKBH2Q6NS38 261 aa10.1□□□□□ -0.79
COMMD3-212ENST00000479958 RBSNQ9H1K0 784 aa10.1□□□□□ -0.79
COMMD3-212ENST00000479958 ZBTB42B2RXF5 422 aa10.09□□□□□ -0.79
COMMD3-212ENST00000479958 MMP20O60882 483 aa10.09□□□□□ -0.79
COMMD3-212ENST00000479958 LOC102724428A0A0B4J2F2 783 aa10.08□□□□□ -0.8
COMMD3-212ENST00000479958 NID1P14543 1247 aa10.08□□□□□ -0.8
COMMD3-212ENST00000479958 SOX18P35713 384 aa10.08□□□□□ -0.8
COMMD3-212ENST00000479958 SIK1P57059 783 aa10.08□□□□□ -0.8
COMMD3-212ENST00000479958 MLLT1Q03111 559 aaPredicted RBP10.08□□□□□ -0.8
COMMD3-212ENST00000479958 APBA3O96018 575 aa10.07□□□□□ -0.8
COMMD3-212ENST00000479958 GHRHP01286 108 aa10.07□□□□□ -0.8
COMMD3-212ENST00000479958 AAMPQ13685 434 aa10.07□□□□□ -0.8
COMMD3-212ENST00000479958 COL9A3Q14050 684 aaPredicted RBP10.07□□□□□ -0.8
COMMD3-212ENST00000479958 TTC9Q92623 222 aa10.07□□□□□ -0.8
COMMD3-212ENST00000479958 CARNS1A5YM72 827 aa10.07□□□□□ -0.8
COMMD3-212ENST00000479958 EIF2AK2P19525 551 aaKnown RBP10.07□□□□□ -0.8
COMMD3-212ENST00000479958 SCNN1AP37088 669 aa10.07□□□□□ -0.8
COMMD3-212ENST00000479958 AFF1P51825 1210 aaKnown RBP10.07□□□□□ -0.8
COMMD3-212ENST00000479958 RAC1P63000 192 aa10.07□□□□□ -0.8
COMMD3-212ENST00000479958 PERM1Q5SV97 790 aa10.07□□□□□ -0.8
COMMD3-212ENST00000479958 HFE2Q6ZVN8 426 aa10.07□□□□□ -0.8
COMMD3-212ENST00000479958 NAGPAQ9UK23 515 aa10.07□□□□□ -0.8
COMMD3-212ENST00000479958 LOC100996750A0A140TA64 210 aa10.06□□□□□ -0.8
COMMD3-212ENST00000479958 FAM13AO94988 1023 aa10.06□□□□□ -0.8
COMMD3-212ENST00000479958 SF3B2Q13435 895 aaKnown RBP10.06□□□□□ -0.8
COMMD3-212ENST00000479958 TRIP4Q15650 581 aaPredicted RBP10.06□□□□□ -0.8
COMMD3-212ENST00000479958 PDE12Q6L8Q7 609 aaKnown RBP10.06□□□□□ -0.8
COMMD3-212ENST00000479958 NUDT16Q96DE0 195 aaKnown RBP10.06□□□□□ -0.8
COMMD3-212ENST00000479958 SPACA7Q96KW9 195 aa10.06□□□□□ -0.8
COMMD3-212ENST00000479958 NACC1Q96RE7 527 aa10.06□□□□□ -0.8
COMMD3-212ENST00000479958 KRTAP4-6Q9BYQ5 205 aa10.06□□□□□ -0.8
COMMD3-212ENST00000479958 C1QTNF9BB2RNN3 333 aa10.05□□□□□ -0.8
COMMD3-212ENST00000479958 FKBP4Q02790 459 aaKnown RBP eCLIP10.05□□□□□ -0.8
COMMD3-212ENST00000479958 SUZ12Q15022 739 aaKnown RBP10.05□□□□□ -0.8
COMMD3-212ENST00000479958 SPOCK3Q9BQ16 436 aa10.05□□□□□ -0.8
COMMD3-212ENST00000479958 LPIN3Q9BQK8 851 aa10.05□□□□□ -0.8
COMMD3-212ENST00000479958 HOXD8P13378 290 aaPredicted RBP10.04□□□□□ -0.8
COMMD3-212ENST00000479958 EIF1AXP47813 144 aaKnown RBP10.04□□□□□ -0.8
COMMD3-212ENST00000479958 DNM1Q05193 864 aaKnown RBP10.04□□□□□ -0.8
COMMD3-212ENST00000479958 PHLDB3Q6NSJ2 640 aa10.04□□□□□ -0.8
COMMD3-212ENST00000479958 ATCAYQ86WG3 371 aa10.04□□□□□ -0.8
COMMD3-212ENST00000479958 OR13H1Q8NG92 308 aa10.04□□□□□ -0.8
COMMD3-212ENST00000479958 EDEM1Q92611 657 aa10.04□□□□□ -0.8
COMMD3-212ENST00000479958 SMG9Q9H0W8 520 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms