RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 VEGFBP49765 207 aa14.34□□□□□ -0.11
CCDC58-205ENST00000479899 U2AF1Q01081 240 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCDC58-205ENST00000479899 CLEC4GQ6UXB4 293 aa14.34□□□□□ -0.11
CCDC58-205ENST00000479899 NGEFQ8N5V2 710 aa14.34□□□□□ -0.11
CCDC58-205ENST00000479899 NBPF26B4DH59 902 aa14.33□□□□□ -0.12
CCDC58-205ENST00000479899 EPHX2P34913 555 aa14.33□□□□□ -0.12
CCDC58-205ENST00000479899 IARSP41252 1262 aaKnown RBP14.33□□□□□ -0.12
CCDC58-205ENST00000479899 MAP1SQ66K74 1059 aaPredicted RBP14.33□□□□□ -0.12
CCDC58-205ENST00000479899 NBPF10Q6P3W6 841 aaKnown RBP14.33□□□□□ -0.12
CCDC58-205ENST00000479899 TPTE2Q6XPS3 522 aa14.33□□□□□ -0.12
CCDC58-205ENST00000479899 NBPF15Q8N660 670 aa14.33□□□□□ -0.12
CCDC58-205ENST00000479899 C7orf43Q8WVR3 580 aa14.33□□□□□ -0.12
CCDC58-205ENST00000479899 NUDCQ9Y266 331 aa14.33□□□□□ -0.12
CCDC58-205ENST00000479899 ABCC12Q96J65 1359 aa14.33□□□□□ -0.12
CCDC58-205ENST00000479899 SNPHO15079 494 aa14.32□□□□□ -0.12
CCDC58-205ENST00000479899 MFSD10Q14728 455 aa14.32□□□□□ -0.12
CCDC58-205ENST00000479899 HLFQ16534 295 aa14.32□□□□□ -0.12
CCDC58-205ENST00000479899 RTKN2Q8IZC4 609 aa14.32□□□□□ -0.12
CCDC58-205ENST00000479899 SYNE4Q8N205 404 aa14.32□□□□□ -0.12
CCDC58-205ENST00000479899 DDX27Q96GQ7 796 aaKnown RBP14.32□□□□□ -0.12
CCDC58-205ENST00000479899 GJA3Q9Y6H8 435 aa14.32□□□□□ -0.12
CCDC58-205ENST00000479899 ITGBL1O95965 494 aaPredicted RBP14.31□□□□□ -0.12
CCDC58-205ENST00000479899 CTCFP49711 727 aaPredicted RBP14.31□□□□□ -0.12
CCDC58-205ENST00000479899 DSG2Q14126 1118 aa14.31□□□□□ -0.12
CCDC58-205ENST00000479899 NUTM1Q86Y26 1132 aa14.31□□□□□ -0.12
CCDC58-205ENST00000479899 MIS18AQ9NYP9 233 aa14.31□□□□□ -0.12
CCDC58-205ENST00000479899 ABT1Q9ULW3 272 aaKnown RBP14.31□□□□□ -0.12
CCDC58-205ENST00000479899 COL4A5P29400 1685 aa14.3□□□□□ -0.12
CCDC58-205ENST00000479899 LTBP1Q14766 1721 aa14.3□□□□□ -0.12
CCDC58-205ENST00000479899 NUP98P52948 1817 aa14.3□□□□□ -0.12
CCDC58-205ENST00000479899 ALDH1B1P30837 517 aa14.3□□□□□ -0.12
CCDC58-205ENST00000479899 LBX1P52954 281 aa14.3□□□□□ -0.12
CCDC58-205ENST00000479899 CNTROBQ8N137 903 aa14.3□□□□□ -0.12
CCDC58-205ENST00000479899 PRDM10Q9NQV6 1147 aa14.3□□□□□ -0.12
CCDC58-205ENST00000479899 DLG5Q8TDM6 1919 aa14.3□□□□□ -0.12
CCDC58-205ENST00000479899 KDM3BQ7LBC6 1761 aa14.29□□□□□ -0.12
CCDC58-205ENST00000479899 KLRG2A4D1S0 409 aaPredicted RBP14.29□□□□□ -0.12
CCDC58-205ENST00000479899 TCERG1O14776 1098 aaKnown RBP14.29□□□□□ -0.12
CCDC58-205ENST00000479899 GRM1Q13255 1194 aa14.29□□□□□ -0.12
CCDC58-205ENST00000479899 PPP1R15BQ5SWA1 713 aa14.29□□□□□ -0.12
CCDC58-205ENST00000479899 SLC51AQ86UW1 340 aa14.29□□□□□ -0.12
CCDC58-205ENST00000479899 PLPP6Q8IY26 295 aa14.29□□□□□ -0.12
CCDC58-205ENST00000479899 JDP2Q8WYK2 163 aa14.29□□□□□ -0.12
CCDC58-205ENST00000479899 RPGRQ92834 1020 aaKnown RBP14.29□□□□□ -0.12
CCDC58-205ENST00000479899 FZD9O00144 591 aa14.28□□□□□ -0.12
CCDC58-205ENST00000479899 GPTP24298 496 aa14.28□□□□□ -0.12
CCDC58-205ENST00000479899 LMOD1P29536 600 aaPredicted RBP14.28□□□□□ -0.12
CCDC58-205ENST00000479899 PPP2R1AP30153 589 aa14.28□□□□□ -0.12
CCDC58-205ENST00000479899 EIF6P56537 245 aaKnown RBP14.28□□□□□ -0.12
CCDC58-205ENST00000479899 DEFB115Q30KQ5 88 aa14.28□□□□□ -0.12
CCDC58-205ENST00000479899 KIF6Q6ZMV9 814 aa14.28□□□□□ -0.12
CCDC58-205ENST00000479899 PNMA8AQ86V59 439 aaPredicted RBP14.28□□□□□ -0.12
CCDC58-205ENST00000479899 GPC2Q8N158 579 aa14.28□□□□□ -0.12
CCDC58-205ENST00000479899 MYL6BP14649 208 aa14.27□□□□□ -0.13
CCDC58-205ENST00000479899 NYXQ9GZU5 481 aa14.27□□□□□ -0.13
CCDC58-205ENST00000479899 RRP7AQ9Y3A4 280 aaKnown RBP14.27□□□□□ -0.13
CCDC58-205ENST00000479899 SNED1Q8TER0 1413 aa14.26□□□□□ -0.13
CCDC58-205ENST00000479899 WDR33Q9C0J8 1336 aaKnown RBP14.26□□□□□ -0.13
CCDC58-205ENST00000479899 RASSF10A6NK89 507 aa14.26□□□□□ -0.13
CCDC58-205ENST00000479899 HSPA8P11142 646 aaKnown RBP14.26□□□□□ -0.13
CCDC58-205ENST00000479899 FMR1Q06787 632 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCDC58-205ENST00000479899 TAF7Q15545 349 aaPredicted RBP14.26□□□□□ -0.13
CCDC58-205ENST00000479899 TTLL7Q6ZT98 887 aa14.26□□□□□ -0.13
CCDC58-205ENST00000479899 LARGE2Q8N3Y3 721 aa14.26□□□□□ -0.13
CCDC58-205ENST00000479899 PSMD1Q99460 953 aa14.26□□□□□ -0.13
CCDC58-205ENST00000479899 ZBTB3Q9H5J0 574 aa14.26□□□□□ -0.13
CCDC58-205ENST00000479899 WDR70Q9NW82 654 aa14.26□□□□□ -0.13
CCDC58-205ENST00000479899 WBP1LQ9NX94 342 aa14.26□□□□□ -0.13
CCDC58-205ENST00000479899 MAP3K15Q6ZN16 1313 aa14.25□□□□□ -0.13
CCDC58-205ENST00000479899 UBN2Q6ZU65 1347 aa14.25□□□□□ -0.13
CCDC58-205ENST00000479899 DOK7Q18PE1 504 aa14.25□□□□□ -0.13
CCDC58-205ENST00000479899 THSD7BQ9C0I4 1608 aa14.24□□□□□ -0.13
CCDC58-205ENST00000479899 PPEF1O14829 653 aaPredicted RBP14.24□□□□□ -0.13
CCDC58-205ENST00000479899 HTATSF1O43719 755 aaKnown RBP14.24□□□□□ -0.13
CCDC58-205ENST00000479899 NEFMP07197 916 aa14.24□□□□□ -0.13
CCDC58-205ENST00000479899 CRY2Q49AN0 593 aa14.24□□□□□ -0.13
CCDC58-205ENST00000479899 THUMPD2Q9BTF0 503 aaKnown RBP14.24□□□□□ -0.13
CCDC58-205ENST00000479899 DDX21Q9NR30 783 aaKnown RBP eCLIP14.24□□□□□ -0.13
CCDC58-205ENST00000479899 RIC1Q4ADV7 1423 aa14.24□□□□□ -0.13
CCDC58-205ENST00000479899 TRPM7Q96QT4 1865 aa14.23□□□□□ -0.13
CCDC58-205ENST00000479899 HOXB3P14651 431 aaPredicted RBP14.23□□□□□ -0.13
CCDC58-205ENST00000479899 EPS15P42566 896 aa14.23□□□□□ -0.13
CCDC58-205ENST00000479899 SCNN1DP51172 638 aa14.23□□□□□ -0.13
CCDC58-205ENST00000479899 SUSD4Q5VX71 490 aa14.23□□□□□ -0.13
CCDC58-205ENST00000479899 CYP4F22Q6NT55 531 aa14.23□□□□□ -0.13
CCDC58-205ENST00000479899 NIM1KQ8IY84 436 aa14.23□□□□□ -0.13
CCDC58-205ENST00000479899 ERVV-1B6SEH8 477 aa14.22□□□□□ -0.13
CCDC58-205ENST00000479899 TRAF5O00463 557 aa14.22□□□□□ -0.13
CCDC58-205ENST00000479899 PPIP5K2O43314 1243 aa14.22□□□□□ -0.13
CCDC58-205ENST00000479899 MAP2K1Q02750 393 aaPredicted RBP14.22□□□□□ -0.13
CCDC58-205ENST00000479899 CC2D2BQ6DHV5 1058 aa14.22□□□□□ -0.13
CCDC58-205ENST00000479899 RBM17Q96I25 401 aaKnown RBP14.22□□□□□ -0.13
CCDC58-205ENST00000479899 CAPNS2Q96L46 248 aa14.22□□□□□ -0.13
CCDC58-205ENST00000479899 IBTKQ9P2D0 1353 aaPredicted RBP14.22□□□□□ -0.13
CCDC58-205ENST00000479899 SLC34A2O95436 690 aa14.21□□□□□ -0.13
CCDC58-205ENST00000479899 AOC3Q16853 763 aa14.21□□□□□ -0.13
CCDC58-205ENST00000479899 PNISRQ8TF01 805 aaKnown RBP14.21□□□□□ -0.13
CCDC58-205ENST00000479899 ABHD8Q96I13 439 aa14.21□□□□□ -0.13
CCDC58-205ENST00000479899 TSKSQ9UJT2 592 aa14.21□□□□□ -0.13
CCDC58-205ENST00000479899 LAMB2P55268 1798 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms