RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 TTLL11Q8NHH1 800 aa15.68■□□□□ 0.1
TRAPPC12-218ENST00000479897 PDZRN3Q9UPQ7 1066 aa15.68■□□□□ 0.1
TRAPPC12-218ENST00000479897 BRCA1P38398 1863 aaKnown RBP15.67■□□□□ 0.1
TRAPPC12-218ENST00000479897 ATP8B2P98198 1209 aa15.67■□□□□ 0.1
TRAPPC12-218ENST00000479897 LMBR1LQ6UX01 489 aa15.67■□□□□ 0.1
TRAPPC12-218ENST00000479897 SSH3Q8TE77 659 aa15.67■□□□□ 0.1
TRAPPC12-218ENST00000479897 NLRP3Q96P20 1036 aa15.67■□□□□ 0.1
TRAPPC12-218ENST00000479897 SPON1Q9HCB6 807 aa15.67■□□□□ 0.1
TRAPPC12-218ENST00000479897 ATF5Q9Y2D1 282 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC12-218ENST00000479897 PCDHB15Q9Y5E8 787 aa15.67■□□□□ 0.1
TRAPPC12-218ENST00000479897 SPEF2Q9C093 1822 aa15.66■□□□□ 0.1
TRAPPC12-218ENST00000479897 LRRC37AA6NMS7 1700 aa15.66■□□□□ 0.1
TRAPPC12-218ENST00000479897 PDE6BP35913 854 aa15.66■□□□□ 0.1
TRAPPC12-218ENST00000479897 POLA2Q14181 598 aa15.66■□□□□ 0.1
TRAPPC12-218ENST00000479897 CCDC152Q4G0S7 254 aa15.66■□□□□ 0.1
TRAPPC12-218ENST00000479897 C3orf67Q6ZVT6 689 aa15.66■□□□□ 0.1
TRAPPC12-218ENST00000479897 A0A1B0GUL6 1792 aa15.66■□□□□ 0.1
TRAPPC12-218ENST00000479897 COL4A1P02462 1669 aa15.65■□□□□ 0.1
TRAPPC12-218ENST00000479897 PNMA6EA0A0J9YXQ4 647 aa15.65■□□□□ 0.1
TRAPPC12-218ENST00000479897 HMMRO75330 724 aa15.65■□□□□ 0.1
TRAPPC12-218ENST00000479897 HDAC1Q13547 482 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC12-218ENST00000479897 FAM161AQ3B820 660 aa15.65■□□□□ 0.1
TRAPPC12-218ENST00000479897 SIRT2Q8IXJ6 389 aa15.65■□□□□ 0.1
TRAPPC12-218ENST00000479897 SRGAP3O43295 1099 aa15.64■□□□□ 0.09
TRAPPC12-218ENST00000479897 TAF1P21675 1872 aa15.64■□□□□ 0.09
TRAPPC12-218ENST00000479897 HOXA10P31260 410 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC12-218ENST00000479897 RFX5P48382 616 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC12-218ENST00000479897 CCDC24Q8N4L8 307 aa15.64■□□□□ 0.09
TRAPPC12-218ENST00000479897 CACNA1SQ13698 1873 aa15.63■□□□□ 0.09
TRAPPC12-218ENST00000479897 GREM2Q9H772 168 aa15.63■□□□□ 0.09
TRAPPC12-218ENST00000479897 SRGNP10124 158 aa15.62■□□□□ 0.09
TRAPPC12-218ENST00000479897 ITGA6P23229 1130 aa15.62■□□□□ 0.09
TRAPPC12-218ENST00000479897 IFIT5Q13325 482 aaKnown RBP15.62■□□□□ 0.09
TRAPPC12-218ENST00000479897 COPRSQ9NQ92 184 aa15.62■□□□□ 0.09
TRAPPC12-218ENST00000479897 PPP4R2Q9NY27 417 aa15.62■□□□□ 0.09
TRAPPC12-218ENST00000479897 FBXO3Q9UK99 471 aa15.62■□□□□ 0.09
TRAPPC12-218ENST00000479897 CD2APQ9Y5K6 639 aa15.62■□□□□ 0.09
TRAPPC12-218ENST00000479897 ANKRD18BA2A2Z9 1011 aa15.61■□□□□ 0.09
TRAPPC12-218ENST00000479897 NPR1P16066 1061 aa15.61■□□□□ 0.09
TRAPPC12-218ENST00000479897 PTPN12Q05209 780 aaKnown RBP15.61■□□□□ 0.09
TRAPPC12-218ENST00000479897 CCDC57Q2TAC2 916 aa15.61■□□□□ 0.09
TRAPPC12-218ENST00000479897 CRAMP1Q96RY5 1269 aa15.61■□□□□ 0.09
TRAPPC12-218ENST00000479897 CDC5LQ99459 802 aaKnown RBP15.61■□□□□ 0.09
TRAPPC12-218ENST00000479897 NOP58Q9Y2X3 529 aaKnown RBP15.61■□□□□ 0.09
TRAPPC12-218ENST00000479897 CHMP3Q9Y3E7 222 aa15.61■□□□□ 0.09
TRAPPC12-218ENST00000479897 TGFB2P61812 414 aa15.6■□□□□ 0.09
TRAPPC12-218ENST00000479897 STYK1Q6J9G0 422 aa15.6■□□□□ 0.09
TRAPPC12-218ENST00000479897 DDX46Q7L014 1031 aaKnown RBP15.6■□□□□ 0.09
TRAPPC12-218ENST00000479897 RPGRQ92834 1020 aaKnown RBP15.6■□□□□ 0.09
TRAPPC12-218ENST00000479897 MASTLQ96GX5 879 aa15.6■□□□□ 0.09
TRAPPC12-218ENST00000479897 RWDD1Q9H446 243 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC12-218ENST00000479897 H0YIN7 160 aa15.59■□□□□ 0.09
TRAPPC12-218ENST00000479897 GRAPQ13588 217 aa15.59■□□□□ 0.09
TRAPPC12-218ENST00000479897 GRAPLQ8TC17 118 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC12-218ENST00000479897 RBM17Q96I25 401 aaKnown RBP15.59■□□□□ 0.09
TRAPPC12-218ENST00000479897 CCDC85AQ96PX6 553 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC12-218ENST00000479897 DCTPP1Q9H773 170 aa15.59■□□□□ 0.09
TRAPPC12-218ENST00000479897 SEC31BQ9NQW1 1179 aa15.59■□□□□ 0.09
TRAPPC12-218ENST00000479897 LTBP1Q14766 1721 aa15.59■□□□□ 0.09
TRAPPC12-218ENST00000479897 CIAO1O76071 339 aa15.58■□□□□ 0.08
TRAPPC12-218ENST00000479897 TMC4Q7Z404 712 aa15.58■□□□□ 0.08
TRAPPC12-218ENST00000479897 C2CD5Q86YS7 1000 aa15.58■□□□□ 0.08
TRAPPC12-218ENST00000479897 SLX4Q8IY92 1834 aa15.58■□□□□ 0.08
TRAPPC12-218ENST00000479897 ARFGEF1Q9Y6D6 1849 aa15.58■□□□□ 0.08
TRAPPC12-218ENST00000479897 KDM2BQ8NHM5 1336 aa15.58■□□□□ 0.08
TRAPPC12-218ENST00000479897 ARAP2Q8WZ64 1704 aa15.57■□□□□ 0.08
TRAPPC12-218ENST00000479897 ALDH1B1P30837 517 aa15.57■□□□□ 0.08
TRAPPC12-218ENST00000479897 IGHMBP2P38935 993 aaKnown RBP15.57■□□□□ 0.08
TRAPPC12-218ENST00000479897 HSP90AB4PQ58FF6 505 aa15.57■□□□□ 0.08
TRAPPC12-218ENST00000479897 ANKRD18AQ8IVF6 992 aa15.57■□□□□ 0.08
TRAPPC12-218ENST00000479897 SMC5Q8IY18 1101 aa15.57■□□□□ 0.08
TRAPPC12-218ENST00000479897 CELF1Q92879 486 aaKnown RBP15.57■□□□□ 0.08
TRAPPC12-218ENST00000479897 GCC1Q96CN9 775 aa15.57■□□□□ 0.08
TRAPPC12-218ENST00000479897 BSDC1Q9NW68 430 aaPredicted RBP15.57■□□□□ 0.08
TRAPPC12-218ENST00000479897 PA2G4Q9UQ80 394 aaKnown RBP15.57■□□□□ 0.08
TRAPPC12-218ENST00000479897 EYA2O00167 538 aa15.56■□□□□ 0.08
TRAPPC12-218ENST00000479897 IGHDP01880 384 aa15.56■□□□□ 0.08
TRAPPC12-218ENST00000479897 RPS8P62241 208 aaKnown RBP15.56■□□□□ 0.08
TRAPPC12-218ENST00000479897 TAF7LQ5H9L4 462 aa15.56■□□□□ 0.08
TRAPPC12-218ENST00000479897 KLHDC4Q8TBB5 520 aa15.56■□□□□ 0.08
TRAPPC12-218ENST00000479897 CNKSR1Q969H4 720 aa15.56■□□□□ 0.08
TRAPPC12-218ENST00000479897 CCDC136Q96JN2 1154 aa15.56■□□□□ 0.08
TRAPPC12-218ENST00000479897 GTF3C3Q9Y5Q9 886 aa15.56■□□□□ 0.08
TRAPPC12-218ENST00000479897 RAB11FIP3O75154 756 aa15.55■□□□□ 0.08
TRAPPC12-218ENST00000479897 BBOX1O75936 387 aa15.55■□□□□ 0.08
TRAPPC12-218ENST00000479897 KCNA3P22001 575 aa15.55■□□□□ 0.08
TRAPPC12-218ENST00000479897 CHRNA5P30532 468 aa15.55■□□□□ 0.08
TRAPPC12-218ENST00000479897 IL15P40933 162 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC12-218ENST00000479897 CENPQQ7L2Z9 268 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC12-218ENST00000479897 ATG9AQ7Z3C6 839 aa15.55■□□□□ 0.08
TRAPPC12-218ENST00000479897 ERC1Q8IUD2 1116 aa15.55■□□□□ 0.08
TRAPPC12-218ENST00000479897 ZNF594Q96JF6 807 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC12-218ENST00000479897 SNED1Q8TER0 1413 aa15.54■□□□□ 0.08
TRAPPC12-218ENST00000479897 SURF6O75683 361 aaKnown RBP15.54■□□□□ 0.08
TRAPPC12-218ENST00000479897 DPEP1P16444 411 aa15.54■□□□□ 0.08
TRAPPC12-218ENST00000479897 LDHAL6AQ6ZMR3 332 aa15.54■□□□□ 0.08
TRAPPC12-218ENST00000479897 MPHOSPH8Q99549 860 aa15.54■□□□□ 0.08
TRAPPC12-218ENST00000479897 EXOC6BQ9Y2D4 811 aa15.54■□□□□ 0.08
TRAPPC12-218ENST00000479897 RIPOR2Q9Y4F9 1068 aa15.54■□□□□ 0.08
TRAPPC12-218ENST00000479897 MROH5Q6ZUA9 1318 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms