RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 CETN1Q12798 172 aa22.52■■□□□ 1.2
ABCA2-217ENST00000479446 KDM5BQ9UGL1 1544 aa22.52■■□□□ 1.2
ABCA2-217ENST00000479446 ZBTB43O43298 467 aa22.52■■□□□ 1.2
ABCA2-217ENST00000479446 RAB3GAP1Q15042 981 aa22.52■■□□□ 1.2
ABCA2-217ENST00000479446 MCMDC2Q4G0Z9 681 aa22.52■■□□□ 1.2
ABCA2-217ENST00000479446 MICALCLQ6ZW33 695 aa22.52■■□□□ 1.2
ABCA2-217ENST00000479446 ZKSCAN5Q9Y2L8 839 aa22.52■■□□□ 1.2
ABCA2-217ENST00000479446 HLTFQ14527 1009 aaKnown RBP eCLIP22.52■■□□□ 1.24e-7■□□□□ 8.9
ABCA2-217ENST00000479446 SPECC1Q5M775 1068 aa22.52■■□□□ 1.19
ABCA2-217ENST00000479446 DHX37Q8IY37 1157 aaKnown RBP22.52■■□□□ 1.19
ABCA2-217ENST00000479446 C16orf71Q8IYS4 520 aaPredicted RBP22.52■■□□□ 1.19
ABCA2-217ENST00000479446 RMND1Q9NWS8 449 aa22.52■■□□□ 1.19
ABCA2-217ENST00000479446 WTAPQ15007 396 aa22.51■■□□□ 1.19
ABCA2-217ENST00000479446 GRM8O00222 908 aa22.51■■□□□ 1.19
ABCA2-217ENST00000479446 NBPF7P0C2Y1 421 aaPredicted RBP22.51■■□□□ 1.19
ABCA2-217ENST00000479446 GTF2F1P35269 517 aaKnown RBP eCLIP22.51■■□□□ 1.191e-9■■■■■ 37.2
ABCA2-217ENST00000479446 JARID2Q92833 1246 aaPredicted RBP22.51■■□□□ 1.19
ABCA2-217ENST00000479446 ZNF830Q96NB3 372 aaPredicted RBP22.51■■□□□ 1.19
ABCA2-217ENST00000479446 ALG1Q9BT22 464 aa22.51■■□□□ 1.19
ABCA2-217ENST00000479446 KRT23Q9C075 422 aa22.51■■□□□ 1.19
ABCA2-217ENST00000479446 GCOM1H8Y6P7 765 aaPredicted RBP22.51■■□□□ 1.19
ABCA2-217ENST00000479446 EXOC5O00471 708 aa22.51■■□□□ 1.19
ABCA2-217ENST00000479446 BAG3O95817 575 aa22.51■■□□□ 1.19
ABCA2-217ENST00000479446 MYZAPP0CAP1 466 aa22.51■■□□□ 1.19
ABCA2-217ENST00000479446 LRRC2Q9BYS8 371 aa22.51■■□□□ 1.19
ABCA2-217ENST00000479446 TMTC2Q8N394 836 aa22.51■■□□□ 1.19
ABCA2-217ENST00000479446 GOPCQ9HD26 462 aa22.51■■□□□ 1.19
ABCA2-217ENST00000479446 LRRC27Q9C0I9 530 aa22.5■■□□□ 1.19
ABCA2-217ENST00000479446 KSR2Q6VAB6 950 aa22.5■■□□□ 1.19
ABCA2-217ENST00000479446 RLBP1P12271 317 aa22.5■■□□□ 1.19
ABCA2-217ENST00000479446 DNM1Q05193 864 aaKnown RBP22.5■■□□□ 1.19
ABCA2-217ENST00000479446 CTR9Q6PD62 1173 aa22.5■■□□□ 1.19
ABCA2-217ENST00000479446 TCERG1LQ5VWI1 586 aa22.49■■□□□ 1.19
ABCA2-217ENST00000479446 PPP4R3AQ6IN85 833 aa22.49■■□□□ 1.19
ABCA2-217ENST00000479446 EHMT1Q9H9B1 1298 aa22.49■■□□□ 1.19
ABCA2-217ENST00000479446 TMCO5BA8MYB1 307 aa22.49■■□□□ 1.19
ABCA2-217ENST00000479446 TRIM21P19474 475 aaKnown RBP22.49■■□□□ 1.19
ABCA2-217ENST00000479446 XAGE3Q8WTP9 111 aa22.49■■□□□ 1.19
ABCA2-217ENST00000479446 RPGRQ92834 1020 aaKnown RBP22.49■■□□□ 1.19
ABCA2-217ENST00000479446 TAOK3Q9H2K8 898 aa22.49■■□□□ 1.19
ABCA2-217ENST00000479446 SMC1AQ14683 1233 aaKnown RBP22.49■■□□□ 1.19
ABCA2-217ENST00000479446 TRIM47Q96LD4 638 aa22.49■■□□□ 1.19
ABCA2-217ENST00000479446 CTAGE1Q96RT6 745 aa22.49■■□□□ 1.19
ABCA2-217ENST00000479446 NEBLO76041 1014 aa22.49■■□□□ 1.19
ABCA2-217ENST00000479446 Q6ZUG5 572 aa22.49■■□□□ 1.19
ABCA2-217ENST00000479446 TTC41PQ6P2S7 1318 aa22.49■■□□□ 1.19
ABCA2-217ENST00000479446 SPTY2D1Q68D10 685 aaPredicted RBP22.49■■□□□ 1.19
ABCA2-217ENST00000479446 ZBTB40Q9NUA8 1239 aa22.49■■□□□ 1.19
ABCA2-217ENST00000479446 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.48■■□□□ 1.192e-7■■■□□ 16.3
ABCA2-217ENST00000479446 VAMP4O75379 141 aa22.48■■□□□ 1.19
ABCA2-217ENST00000479446 SPAG1Q07617 926 aa22.48■■□□□ 1.19
ABCA2-217ENST00000479446 JADE2Q9NQC1 790 aa22.48■■□□□ 1.19
ABCA2-217ENST00000479446 TNNQ9UQP3 1299 aa22.48■■□□□ 1.19
ABCA2-217ENST00000479446 CNNM2Q9H8M5 875 aa22.48■■□□□ 1.19
ABCA2-217ENST00000479446 BCCIPQ9P287 314 aaKnown RBP eCLIP22.48■■□□□ 1.19
ABCA2-217ENST00000479446 PRIM1P49642 420 aaKnown RBP22.48■■□□□ 1.19
ABCA2-217ENST00000479446 PUS7Q96PZ0 661 aaKnown RBP22.48■■□□□ 1.19
ABCA2-217ENST00000479446 SPDYE4A6NLX3 237 aa22.48■■□□□ 1.19
ABCA2-217ENST00000479446 CEP85Q6P2H3 762 aa22.48■■□□□ 1.19
ABCA2-217ENST00000479446 ZSWIM4Q9H7M6 989 aa22.48■■□□□ 1.19
ABCA2-217ENST00000479446 COPS6Q7L5N1 327 aa22.47■■□□□ 1.19
ABCA2-217ENST00000479446 AKR1B10O60218 316 aa22.47■■□□□ 1.19
ABCA2-217ENST00000479446 DNAJC25Q9H1X3 360 aa22.47■■□□□ 1.19
ABCA2-217ENST00000479446 IL15P40933 162 aaPredicted RBP22.47■■□□□ 1.19
ABCA2-217ENST00000479446 POLKQ9UBT6 870 aa22.47■■□□□ 1.19
ABCA2-217ENST00000479446 UGGT2Q9NYU1 1516 aa22.47■■□□□ 1.19
ABCA2-217ENST00000479446 PIK3C2GO75747 1445 aa22.47■■□□□ 1.19
ABCA2-217ENST00000479446 CTNNBL1Q8WYA6 563 aaPredicted RBP22.47■■□□□ 1.19
ABCA2-217ENST00000479446 CEBPAP49715 358 aaPredicted RBP22.46■■□□□ 1.19
ABCA2-217ENST00000479446 ATP2B3Q16720 1220 aa22.46■■□□□ 1.19
ABCA2-217ENST00000479446 HS1BP3Q53T59 392 aa22.46■■□□□ 1.19
ABCA2-217ENST00000479446 CRNKL1Q9BZJ0 848 aaKnown RBP22.46■■□□□ 1.19
ABCA2-217ENST00000479446 VAT1LQ9HCJ6 419 aa22.46■■□□□ 1.19
ABCA2-217ENST00000479446 STXBP4Q6ZWJ1 553 aa22.46■■□□□ 1.19
ABCA2-217ENST00000479446 INTS4Q96HW7 963 aaKnown RBP22.46■■□□□ 1.19
ABCA2-217ENST00000479446 EIF4A2Q14240 407 aaKnown RBP22.46■■□□□ 1.19
ABCA2-217ENST00000479446 TUBB4AP04350 444 aa22.46■■□□□ 1.19
ABCA2-217ENST00000479446 NOP2P46087 812 aaKnown RBP22.46■■□□□ 1.19
ABCA2-217ENST00000479446 RRAGBQ5VZM2 374 aa22.46■■□□□ 1.19
ABCA2-217ENST00000479446 KRT222Q8N1A0 295 aa22.46■■□□□ 1.19
ABCA2-217ENST00000479446 PIP4K2BP78356 416 aa22.46■■□□□ 1.19
ABCA2-217ENST00000479446 RNF187Q5TA31 235 aaPredicted RBP22.46■■□□□ 1.19
ABCA2-217ENST00000479446 ESR2Q92731 530 aa22.46■■□□□ 1.19
ABCA2-217ENST00000479446 DNAI2Q9GZS0 605 aa22.46■■□□□ 1.19
ABCA2-217ENST00000479446 EXOC1Q9NV70 894 aa22.46■■□□□ 1.19
ABCA2-217ENST00000479446 NMIQ13287 307 aaPredicted RBP22.45■■□□□ 1.19
ABCA2-217ENST00000479446 LMBR1LQ6UX01 489 aa22.45■■□□□ 1.19
ABCA2-217ENST00000479446 AOPEPQ8N6M6 819 aa22.45■■□□□ 1.19
ABCA2-217ENST00000479446 GIMAP7Q8NHV1 300 aa22.45■■□□□ 1.19
ABCA2-217ENST00000479446 RTN1Q16799 776 aa22.45■■□□□ 1.18
ABCA2-217ENST00000479446 TESK2Q96S53 571 aa22.45■■□□□ 1.18
ABCA2-217ENST00000479446 DNAI1Q9UI46 699 aa22.45■■□□□ 1.18
ABCA2-217ENST00000479446 MACROD2A1Z1Q3 448 aa22.45■■□□□ 1.18
ABCA2-217ENST00000479446 LMAN1P49257 510 aa22.45■■□□□ 1.18
ABCA2-217ENST00000479446 NPHP3Q7Z494 1330 aa22.45■■□□□ 1.18
ABCA2-217ENST00000479446 CCDC175P0C221 793 aa22.44■■□□□ 1.18
ABCA2-217ENST00000479446 CKAP4Q07065 602 aaKnown RBP22.44■■□□□ 1.18
ABCA2-217ENST00000479446 HOOK3Q86VS8 718 aa22.44■■□□□ 1.18
ABCA2-217ENST00000479446 LINS1Q8NG48 757 aa22.44■■□□□ 1.18
ABCA2-217ENST00000479446 TYRO3Q06418 890 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms