RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 SSH1Q8WYL5 1049 aa10.52□□□□□ -0.73
VPS45-208ENST00000478999 MASTLQ96GX5 879 aa10.52□□□□□ -0.73
VPS45-208ENST00000478999 PHACTR3Q96KR7 559 aa10.52□□□□□ -0.73
VPS45-208ENST00000478999 ZNF277Q9NRM2 450 aaPredicted RBP10.52□□□□□ -0.73
VPS45-208ENST00000478999 TBC1D2BQ9UPU7 963 aa10.52□□□□□ -0.73
VPS45-208ENST00000478999 COL4A5P29400 1685 aa10.52□□□□□ -0.73
VPS45-208ENST00000478999 ECE1P42892 770 aa10.51□□□□□ -0.73
VPS45-208ENST00000478999 FKBP4Q02790 459 aaKnown RBP eCLIP10.51□□□□□ -0.73
VPS45-208ENST00000478999 CCDC93Q567U6 631 aa10.51□□□□□ -0.73
VPS45-208ENST00000478999 OLFM4Q6UX06 510 aa10.51□□□□□ -0.73
VPS45-208ENST00000478999 DZIP3Q86Y13 1208 aaKnown RBP10.51□□□□□ -0.73
VPS45-208ENST00000478999 CNBD1Q8NA66 436 aa10.51□□□□□ -0.73
VPS45-208ENST00000478999 TSR2Q969E8 191 aaKnown RBP10.51□□□□□ -0.73
VPS45-208ENST00000478999 SETDB2Q96T68 719 aa10.51□□□□□ -0.73
VPS45-208ENST00000478999 DAXXQ9UER7 740 aaPredicted RBP10.51□□□□□ -0.73
VPS45-208ENST00000478999 ZNF652Q9Y2D9 606 aa10.51□□□□□ -0.73
VPS45-208ENST00000478999 CEMIPQ8WUJ3 1361 aa10.51□□□□□ -0.73
VPS45-208ENST00000478999 FZD9O00144 591 aa10.5□□□□□ -0.73
VPS45-208ENST00000478999 A1BGP04217 495 aa10.5□□□□□ -0.73
VPS45-208ENST00000478999 SNRPA1P09661 255 aaKnown RBP10.5□□□□□ -0.73
VPS45-208ENST00000478999 RGS3P49796 1198 aa10.5□□□□□ -0.73
VPS45-208ENST00000478999 RTL5Q5HYW3 569 aaPredicted RBP10.5□□□□□ -0.73
VPS45-208ENST00000478999 CST9Q5W186 159 aa10.5□□□□□ -0.73
VPS45-208ENST00000478999 PCDHB15Q9Y5E8 787 aa10.5□□□□□ -0.73
VPS45-208ENST00000478999 SNED1Q8TER0 1413 aa10.5□□□□□ -0.73
VPS45-208ENST00000478999 TRAF5O00463 557 aa10.49□□□□□ -0.73
VPS45-208ENST00000478999 HTATSF1O43719 755 aaKnown RBP10.49□□□□□ -0.73
VPS45-208ENST00000478999 EIF5BO60841 1220 aaKnown RBP10.49□□□□□ -0.73
VPS45-208ENST00000478999 PIP4K2AP48426 406 aaPredicted RBP10.49□□□□□ -0.73
VPS45-208ENST00000478999 DGKZQ13574 1117 aa10.49□□□□□ -0.73
VPS45-208ENST00000478999 DCTN1Q14203 1278 aa10.49□□□□□ -0.73
VPS45-208ENST00000478999 UPF2Q9HAU5 1272 aaKnown RBP10.49□□□□□ -0.73
VPS45-208ENST00000478999 TLL2Q9Y6L7 1015 aa10.49□□□□□ -0.73
VPS45-208ENST00000478999 AKAP11Q9UKA4 1901 aa10.48□□□□□ -0.73
VPS45-208ENST00000478999 KCNQ3O43525 872 aa10.48□□□□□ -0.73
VPS45-208ENST00000478999 CAMTA2O94983 1202 aa10.48□□□□□ -0.73
VPS45-208ENST00000478999 GTF2E1P29083 439 aaPredicted RBP10.48□□□□□ -0.73
VPS45-208ENST00000478999 MAP2K2P36507 400 aa10.48□□□□□ -0.73
VPS45-208ENST00000478999 IARSP41252 1262 aaKnown RBP10.48□□□□□ -0.73
VPS45-208ENST00000478999 TAF7Q15545 349 aaPredicted RBP10.48□□□□□ -0.73
VPS45-208ENST00000478999 SMC5Q8IY18 1101 aa10.48□□□□□ -0.73
VPS45-208ENST00000478999 GPC2Q8N158 579 aa10.48□□□□□ -0.73
VPS45-208ENST00000478999 BCL2L13Q9BXK5 485 aa10.48□□□□□ -0.73
VPS45-208ENST00000478999 API5Q9BZZ5 524 aaKnown RBP10.48□□□□□ -0.73
VPS45-208ENST00000478999 ZBTB40Q9NUA8 1239 aa10.48□□□□□ -0.73
VPS45-208ENST00000478999 NBPF5PQ86XG9 351 aaPredicted RBP10.47□□□□□ -0.73
VPS45-208ENST00000478999 ITPRIPQ8IWB1 547 aa10.47□□□□□ -0.73
VPS45-208ENST00000478999 NOB1Q9ULX3 412 aaKnown RBP10.47□□□□□ -0.73
VPS45-208ENST00000478999 USP16Q9Y5T5 823 aa10.47□□□□□ -0.73
VPS45-208ENST00000478999 ABCC4O15439 1325 aa10.47□□□□□ -0.73
VPS45-208ENST00000478999 LAMB2P55268 1798 aa10.47□□□□□ -0.73
VPS45-208ENST00000478999 POLR2AP24928 1970 aaKnown RBP10.46□□□□□ -0.73
VPS45-208ENST00000478999 FAM177BA6PVY3 158 aa10.46□□□□□ -0.73
VPS45-208ENST00000478999 CA12O43570 354 aa10.46□□□□□ -0.73
VPS45-208ENST00000478999 VAMP4O75379 141 aa10.46□□□□□ -0.73
VPS45-208ENST00000478999 NPR1P16066 1061 aa10.46□□□□□ -0.73
VPS45-208ENST00000478999 EPS15P42566 896 aa10.46□□□□□ -0.73
VPS45-208ENST00000478999 SCNN1DP51172 638 aa10.46□□□□□ -0.73
VPS45-208ENST00000478999 SOX10P56693 466 aa10.46□□□□□ -0.73
VPS45-208ENST00000478999 BECN1Q14457 450 aa10.46□□□□□ -0.73
VPS45-208ENST00000478999 SYNE4Q8N205 404 aa10.46□□□□□ -0.73
VPS45-208ENST00000478999 GJA3Q9Y6H8 435 aa10.46□□□□□ -0.73
VPS45-208ENST00000478999 PRAMEF22A3QJZ6 481 aa10.45□□□□□ -0.74
VPS45-208ENST00000478999 PRPF38BQ5VTL8 546 aaKnown RBP10.45□□□□□ -0.74
VPS45-208ENST00000478999 KIF6Q6ZMV9 814 aa10.45□□□□□ -0.74
VPS45-208ENST00000478999 SAPCD2Q86UD0 394 aa10.45□□□□□ -0.74
VPS45-208ENST00000478999 RTKN2Q8IZC4 609 aa10.45□□□□□ -0.74
VPS45-208ENST00000478999 TMEM57Q8N5G2 664 aa10.45□□□□□ -0.74
VPS45-208ENST00000478999 MRPL50Q8N5N7 158 aaKnown RBP10.45□□□□□ -0.74
VPS45-208ENST00000478999 GCC1Q96CN9 775 aa10.45□□□□□ -0.74
VPS45-208ENST00000478999 MBIPQ9NS73 344 aa10.45□□□□□ -0.74
VPS45-208ENST00000478999 MIS18AQ9NYP9 233 aa10.45□□□□□ -0.74
VPS45-208ENST00000478999 NIP7Q9Y221 180 aaKnown RBP eCLIP10.45□□□□□ -0.74
VPS45-208ENST00000478999 KLRG2A4D1S0 409 aaPredicted RBP10.44□□□□□ -0.74
VPS45-208ENST00000478999 LMOD1P29536 600 aaPredicted RBP10.44□□□□□ -0.74
VPS45-208ENST00000478999 C1QBPQ07021 282 aaKnown RBP10.44□□□□□ -0.74
VPS45-208ENST00000478999 TWISTNBQ3B726 338 aaPredicted RBP10.44□□□□□ -0.74
VPS45-208ENST00000478999 CIAPIN1Q6FI81 312 aa10.44□□□□□ -0.74
VPS45-208ENST00000478999 CLEC4GQ6UXB4 293 aa10.44□□□□□ -0.74
VPS45-208ENST00000478999 CACNA1FO60840 1977 aa10.44□□□□□ -0.74
VPS45-208ENST00000478999 PTPRCP08575 1304 aa10.43□□□□□ -0.74
VPS45-208ENST00000478999 MYL6BP14649 208 aa10.43□□□□□ -0.74
VPS45-208ENST00000478999 EIF6P56537 245 aaKnown RBP10.43□□□□□ -0.74
VPS45-208ENST00000478999 TPTE2Q6XPS3 522 aa10.43□□□□□ -0.74
VPS45-208ENST00000478999 USP50Q70EL3 339 aaPredicted RBP10.43□□□□□ -0.74
VPS45-208ENST00000478999 JDP2Q8WYK2 163 aa10.43□□□□□ -0.74
VPS45-208ENST00000478999 ZIC5Q96T25 663 aa10.43□□□□□ -0.74
VPS45-208ENST00000478999 BABAM1Q9NWV8 329 aa10.43□□□□□ -0.74
VPS45-208ENST00000478999 TNNQ9UQP3 1299 aa10.43□□□□□ -0.74
VPS45-208ENST00000478999 CHL1O00533 1208 aa10.42□□□□□ -0.74
VPS45-208ENST00000478999 CELF2O95319 508 aaKnown RBP10.42□□□□□ -0.74
VPS45-208ENST00000478999 NUCB1Q02818 461 aa10.42□□□□□ -0.74
VPS45-208ENST00000478999 SKAP1Q86WV1 359 aa10.42□□□□□ -0.74
VPS45-208ENST00000478999 HHIPL1Q96JK4 782 aa10.42□□□□□ -0.74
VPS45-208ENST00000478999 PSMD1Q99460 953 aa10.42□□□□□ -0.74
VPS45-208ENST00000478999 THUMPD2Q9BTF0 503 aaKnown RBP10.42□□□□□ -0.74
VPS45-208ENST00000478999 NYXQ9GZU5 481 aa10.42□□□□□ -0.74
VPS45-208ENST00000478999 TSPYL4Q9UJ04 414 aa10.42□□□□□ -0.74
VPS45-208ENST00000478999 TAF1P21675 1872 aa10.42□□□□□ -0.74
VPS45-208ENST00000478999 SLC51AQ86UW1 340 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms