RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 ABCC4O15439 1325 aa20.49■□□□□ 0.87
GARNL3-215ENST00000478702 ANXA1P04083 346 aa20.48■□□□□ 0.87
GARNL3-215ENST00000478702 MAP2K1Q02750 393 aaPredicted RBP20.48■□□□□ 0.87
GARNL3-215ENST00000478702 CAPNS2Q96L46 248 aa20.48■□□□□ 0.87
GARNL3-215ENST00000478702 NLRP3Q96P20 1036 aa20.48■□□□□ 0.87
GARNL3-215ENST00000478702 DUOX1Q9NRD9 1551 aa20.47■□□□□ 0.87
GARNL3-215ENST00000478702 CASP8AP2Q9UKL3 1982 aa20.47■□□□□ 0.87
GARNL3-215ENST00000478702 NCBP3Q53F19 620 aaKnown RBP20.47■□□□□ 0.87
GARNL3-215ENST00000478702 CYP4F22Q6NT55 531 aa20.47■□□□□ 0.87
GARNL3-215ENST00000478702 GPRC5DQ9NZD1 345 aa20.47■□□□□ 0.87
GARNL3-215ENST00000478702 CXCL9Q07325 125 aa20.46■□□□□ 0.87
GARNL3-215ENST00000478702 UTP14AQ9BVJ6 771 aaKnown RBP20.46■□□□□ 0.87
GARNL3-215ENST00000478702 RTFDC1Q9BY42 306 aaPredicted RBP20.46■□□□□ 0.87
GARNL3-215ENST00000478702 VPS33BQ9H267 617 aa20.46■□□□□ 0.87
GARNL3-215ENST00000478702 WWC1Q8IX03 1113 aa20.45■□□□□ 0.86
GARNL3-215ENST00000478702 ABHD8Q96I13 439 aa20.45■□□□□ 0.86
GARNL3-215ENST00000478702 ADARB2Q9NS39 739 aaKnown RBP20.45■□□□□ 0.86
GARNL3-215ENST00000478702 TLL2Q9Y6L7 1015 aa20.45■□□□□ 0.86
GARNL3-215ENST00000478702 HDGFL1Q5TGJ6 251 aa20.44■□□□□ 0.86
GARNL3-215ENST00000478702 DUSP27Q5VZP5 1158 aa20.44■□□□□ 0.86
GARNL3-215ENST00000478702 NECTIN2Q92692 538 aa20.44■□□□□ 0.86
GARNL3-215ENST00000478702 ZNRF3Q9ULT6 936 aa20.44■□□□□ 0.86
GARNL3-215ENST00000478702 COL4A1P02462 1669 aa20.43■□□□□ 0.86
GARNL3-215ENST00000478702 ECE1P42892 770 aa20.43■□□□□ 0.86
GARNL3-215ENST00000478702 PAXIP1Q6ZW49 1069 aaPredicted RBP20.43■□□□□ 0.86
GARNL3-215ENST00000478702 GPR101Q96P66 508 aaPredicted RBP20.43■□□□□ 0.86
GARNL3-215ENST00000478702 CHPF2Q9P2E5 772 aa20.43■□□□□ 0.86
GARNL3-215ENST00000478702 IL16Q14005 1332 aa20.43■□□□□ 0.86
GARNL3-215ENST00000478702 HCLS1P14317 486 aaPredicted RBP20.42■□□□□ 0.86
GARNL3-215ENST00000478702 GMPSP49915 693 aaPredicted RBP20.42■□□□□ 0.86
GARNL3-215ENST00000478702 GRM1Q13255 1194 aa20.42■□□□□ 0.86
GARNL3-215ENST00000478702 NLRP10Q86W26 655 aa20.42■□□□□ 0.86
GARNL3-215ENST00000478702 SP8Q8IXZ3 490 aa20.42■□□□□ 0.86
GARNL3-215ENST00000478702 SUPT20HQ8NEM7 779 aa20.42■□□□□ 0.86
GARNL3-215ENST00000478702 CACNA1FO60840 1977 aa20.42■□□□□ 0.86
GARNL3-215ENST00000478702 KIAA2012Q0VF49 1180 aa20.41■□□□□ 0.86
GARNL3-215ENST00000478702 COPS6Q7L5N1 327 aa20.41■□□□□ 0.86
GARNL3-215ENST00000478702 FAM9BQ8IZU0 186 aa20.41■□□□□ 0.86
GARNL3-215ENST00000478702 PGAP2Q9UHJ9 254 aa20.41■□□□□ 0.86
GARNL3-215ENST00000478702 AOC2O75106 756 aa20.4■□□□□ 0.86
GARNL3-215ENST00000478702 BBOX1O75936 387 aa20.4■□□□□ 0.86
GARNL3-215ENST00000478702 HIRAP54198 1017 aaPredicted RBP20.4■□□□□ 0.86
GARNL3-215ENST00000478702 DPP8Q6V1X1 898 aaPredicted RBP20.4■□□□□ 0.86
GARNL3-215ENST00000478702 SAPCD2Q86UD0 394 aa20.4■□□□□ 0.86
GARNL3-215ENST00000478702 MPNDQ8N594 471 aa20.4■□□□□ 0.86
GARNL3-215ENST00000478702 XAGE3Q8WTP9 111 aa20.4■□□□□ 0.86
GARNL3-215ENST00000478702 GLIS2Q9BZE0 524 aaPredicted RBP20.4■□□□□ 0.86
GARNL3-215ENST00000478702 TMX4Q9H1E5 349 aaPredicted RBP20.4■□□□□ 0.86
GARNL3-215ENST00000478702 YDJCA8MPS7 323 aa20.39■□□□□ 0.85
GARNL3-215ENST00000478702 AIMP1Q12904 312 aaKnown RBP20.39■□□□□ 0.85
GARNL3-215ENST00000478702 CIAPIN1Q6FI81 312 aa20.39■□□□□ 0.85
GARNL3-215ENST00000478702 DBF4Q9UBU7 674 aaPredicted RBP20.39■□□□□ 0.85
GARNL3-215ENST00000478702 TSKSQ9UJT2 592 aa20.39■□□□□ 0.85
GARNL3-215ENST00000478702 SCN9AQ15858 1988 aa20.39■□□□□ 0.85
GARNL3-215ENST00000478702 CDHR2Q9BYE9 1310 aa20.38■□□□□ 0.85
GARNL3-215ENST00000478702 SHTN1A0MZ66 631 aa20.38■□□□□ 0.85
GARNL3-215ENST00000478702 RAD17O75943 681 aa20.38■□□□□ 0.85
GARNL3-215ENST00000478702 CELF2O95319 508 aaKnown RBP20.38■□□□□ 0.85
GARNL3-215ENST00000478702 TCIRG1Q13488 830 aa20.38■□□□□ 0.85
GARNL3-215ENST00000478702 GRAPQ13588 217 aa20.38■□□□□ 0.85
GARNL3-215ENST00000478702 HSP90AB3PQ58FF7 597 aa20.38■□□□□ 0.85
GARNL3-215ENST00000478702 GRAPLQ8TC17 118 aaPredicted RBP20.38■□□□□ 0.85
GARNL3-215ENST00000478702 TRPM4Q8TD43 1214 aa20.38■□□□□ 0.85
GARNL3-215ENST00000478702 TSR2Q969E8 191 aaKnown RBP20.38■□□□□ 0.85
GARNL3-215ENST00000478702 MAP2K2P36507 400 aa20.37■□□□□ 0.85
GARNL3-215ENST00000478702 C8orf58Q8NAV2 365 aa20.37■□□□□ 0.85
GARNL3-215ENST00000478702 TRMT112Q9UI30 125 aaKnown RBP20.37■□□□□ 0.85
GARNL3-215ENST00000478702 SH3TC1Q8TE82 1336 aa20.36■□□□□ 0.85
GARNL3-215ENST00000478702 DDX46Q7L014 1031 aaKnown RBP20.36■□□□□ 0.85
GARNL3-215ENST00000478702 ZNF428Q96B54 188 aa20.36■□□□□ 0.85
GARNL3-215ENST00000478702 BEGAINQ9BUH8 593 aa20.36■□□□□ 0.85
GARNL3-215ENST00000478702 HYPKQ9NX55 129 aa20.36■□□□□ 0.85
GARNL3-215ENST00000478702 FANCIQ9NVI1 1328 aa20.35■□□□□ 0.85
GARNL3-215ENST00000478702 PSME4Q14997 1843 aa20.35■□□□□ 0.85
GARNL3-215ENST00000478702 ELL2O00472 640 aaPredicted RBP20.35■□□□□ 0.85
GARNL3-215ENST00000478702 HHIPL1Q96JK4 782 aa20.35■□□□□ 0.85
GARNL3-215ENST00000478702 BCL2L13Q9BXK5 485 aa20.35■□□□□ 0.85
GARNL3-215ENST00000478702 TNIP1Q15025 636 aa20.34■□□□□ 0.85
GARNL3-215ENST00000478702 FAM161AQ3B820 660 aa20.34■□□□□ 0.85
GARNL3-215ENST00000478702 WDR63Q8IWG1 891 aa20.34■□□□□ 0.85
GARNL3-215ENST00000478702 TSPYL6Q8N831 410 aa20.34■□□□□ 0.85
GARNL3-215ENST00000478702 ZC3H15Q8WU90 426 aaKnown RBP20.34■□□□□ 0.85
GARNL3-215ENST00000478702 CNOT7Q9UIV1 285 aaKnown RBP20.34■□□□□ 0.85
GARNL3-215ENST00000478702 AKAP11Q9UKA4 1901 aa20.33■□□□□ 0.85
GARNL3-215ENST00000478702 PLBD2Q8NHP8 589 aa20.33■□□□□ 0.85
GARNL3-215ENST00000478702 ZNF408Q9H9D4 720 aa20.33■□□□□ 0.85
GARNL3-215ENST00000478702 SALL2Q9Y467 1007 aaPredicted RBP20.33■□□□□ 0.85
GARNL3-215ENST00000478702 DLK2Q6UY11 383 aa20.32■□□□□ 0.84
GARNL3-215ENST00000478702 CDC37L1Q7L3B6 337 aa20.32■□□□□ 0.84
GARNL3-215ENST00000478702 CELF1Q92879 486 aaKnown RBP20.32■□□□□ 0.84
GARNL3-215ENST00000478702 ZBTB12Q9Y330 459 aaPredicted RBP20.32■□□□□ 0.84
GARNL3-215ENST00000478702 CCER2I3L3R5 266 aa20.31■□□□□ 0.84
GARNL3-215ENST00000478702 CCDC30Q5VVM6 783 aa20.31■□□□□ 0.84
GARNL3-215ENST00000478702 TMC4Q7Z404 712 aa20.31■□□□□ 0.84
GARNL3-215ENST00000478702 MICALL2Q8IY33 904 aa20.31■□□□□ 0.84
GARNL3-215ENST00000478702 ZIC5Q96T25 663 aa20.31■□□□□ 0.84
GARNL3-215ENST00000478702 ISCA1Q9BUE6 129 aa20.31■□□□□ 0.84
GARNL3-215ENST00000478702 CHMP4AQ9BY43 222 aa20.31■□□□□ 0.84
GARNL3-215ENST00000478702 CCDC85CA6NKD9 419 aa20.3■□□□□ 0.84
GARNL3-215ENST00000478702 BRPF1P55201 1214 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms