RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 NOGQ13253 232 aa26.85■■□□□ 1.89
PDLIM1-202ENST00000477757 TRPM4Q8TD43 1214 aa26.85■■□□□ 1.89
PDLIM1-202ENST00000477757 SLC10A5Q5PT55 438 aa26.84■■□□□ 1.89
PDLIM1-202ENST00000477757 DPP8Q6V1X1 898 aaPredicted RBP26.84■■□□□ 1.89
PDLIM1-202ENST00000477757 CDC37L1Q7L3B6 337 aa26.84■■□□□ 1.89
PDLIM1-202ENST00000477757 TNIP1Q15025 636 aa26.83■■□□□ 1.89
PDLIM1-202ENST00000477757 BCL2L13Q9BXK5 485 aa26.83■■□□□ 1.89
PDLIM1-202ENST00000477757 ANKRD36CQ5JPF3 1778 aa26.83■■□□□ 1.89
PDLIM1-202ENST00000477757 DUOX1Q9NRD9 1551 aa26.83■■□□□ 1.89
PDLIM1-202ENST00000477757 PDE4DIPQ5VU43 2346 aa26.83■■□□□ 1.89
PDLIM1-202ENST00000477757 RAD17O75943 681 aa26.82■■□□□ 1.88
PDLIM1-202ENST00000477757 UTP14AQ9BVJ6 771 aaKnown RBP26.82■■□□□ 1.88
PDLIM1-202ENST00000477757 BBOX1O75936 387 aa26.81■■□□□ 1.88
PDLIM1-202ENST00000477757 SP8Q8IXZ3 490 aa26.81■■□□□ 1.88
PDLIM1-202ENST00000477757 MPNDQ8N594 471 aa26.81■■□□□ 1.88
PDLIM1-202ENST00000477757 ZIC5Q96T25 663 aa26.81■■□□□ 1.88
PDLIM1-202ENST00000477757 LRRC37AA6NMS7 1700 aa26.81■■□□□ 1.88
PDLIM1-202ENST00000477757 HUNKP57058 714 aa26.8■■□□□ 1.88
PDLIM1-202ENST00000477757 LRP10Q7Z4F1 713 aa26.8■■□□□ 1.88
PDLIM1-202ENST00000477757 CNOT7Q9UIV1 285 aaKnown RBP26.79■■□□□ 1.88
PDLIM1-202ENST00000477757 SHTN1A0MZ66 631 aa26.78■■□□□ 1.88
PDLIM1-202ENST00000477757 YDJCA8MPS7 323 aa26.77■■□□□ 1.88
PDLIM1-202ENST00000477757 NEFMP07197 916 aa26.77■■□□□ 1.88
PDLIM1-202ENST00000477757 MICALL2Q8IY33 904 aa26.77■■□□□ 1.88
PDLIM1-202ENST00000477757 THUMPD2Q9BTF0 503 aaKnown RBP26.77■■□□□ 1.88
PDLIM1-202ENST00000477757 SAGE1Q9NXZ1 904 aa26.77■■□□□ 1.88
PDLIM1-202ENST00000477757 USP48Q86UV5 1035 aa26.76■■□□□ 1.87
PDLIM1-202ENST00000477757 FAM155AB1AL88 458 aaPredicted RBP26.75■■□□□ 1.87
PDLIM1-202ENST00000477757 H7C1D1 291 aa26.75■■□□□ 1.87
PDLIM1-202ENST00000477757 GRAPQ13588 217 aa26.75■■□□□ 1.87
PDLIM1-202ENST00000477757 PDIA6Q15084 440 aa26.75■■□□□ 1.87
PDLIM1-202ENST00000477757 GRAPLQ8TC17 118 aaPredicted RBP26.75■■□□□ 1.87
PDLIM1-202ENST00000477757 NFE2L2Q16236 605 aa26.74■■□□□ 1.87
PDLIM1-202ENST00000477757 HCLS1P14317 486 aaPredicted RBP26.73■■□□□ 1.87
PDLIM1-202ENST00000477757 RGMBQ6NW40 437 aa26.73■■□□□ 1.87
PDLIM1-202ENST00000477757 DDX46Q7L014 1031 aaKnown RBP26.73■■□□□ 1.87
PDLIM1-202ENST00000477757 DPF2Q92785 391 aa26.73■■□□□ 1.87
PDLIM1-202ENST00000477757 PLEKHF1Q96S99 279 aa26.73■■□□□ 1.87
PDLIM1-202ENST00000477757 DLK2Q6UY11 383 aa26.72■■□□□ 1.87
PDLIM1-202ENST00000477757 TMC4Q7Z404 712 aa26.72■■□□□ 1.87
PDLIM1-202ENST00000477757 NLRP10Q86W26 655 aa26.72■■□□□ 1.87
PDLIM1-202ENST00000477757 PROSER3Q2NL68 480 aa26.71■■□□□ 1.87
PDLIM1-202ENST00000477757 HSP90AB3PQ58FF7 597 aa26.71■■□□□ 1.87
PDLIM1-202ENST00000477757 KRT26Q7Z3Y9 468 aa26.71■■□□□ 1.87
PDLIM1-202ENST00000477757 GBA2Q9HCG7 927 aaPredicted RBP26.71■■□□□ 1.87
PDLIM1-202ENST00000477757 ZBTB12Q9Y330 459 aaPredicted RBP26.71■■□□□ 1.87
PDLIM1-202ENST00000477757 SAMD7Q7Z3H4 446 aa26.7■■□□□ 1.86
PDLIM1-202ENST00000477757 CCDC102AQ96A19 550 aa26.7■■□□□ 1.86
PDLIM1-202ENST00000477757 DDX60Q8IY21 1712 aaKnown RBP26.7■■□□□ 1.86
PDLIM1-202ENST00000477757 TAF1P21675 1872 aa26.7■■□□□ 1.86
PDLIM1-202ENST00000477757 SH3TC1Q8TE82 1336 aa26.69■■□□□ 1.86
PDLIM1-202ENST00000477757 PSMD14O00487 310 aa26.69■■□□□ 1.86
PDLIM1-202ENST00000477757 TSPYL4Q9UJ04 414 aa26.69■■□□□ 1.86
PDLIM1-202ENST00000477757 EGFRP00533 1210 aa26.68■■□□□ 1.86
PDLIM1-202ENST00000477757 ANXA1P04083 346 aa26.68■■□□□ 1.86
PDLIM1-202ENST00000477757 SOX10P56693 466 aa26.68■■□□□ 1.86
PDLIM1-202ENST00000477757 KIF23Q02241 960 aaPredicted RBP26.68■■□□□ 1.86
PDLIM1-202ENST00000477757 TBC1D10BQ4KMP7 808 aaPredicted RBP26.68■■□□□ 1.86
PDLIM1-202ENST00000477757 C2orf69Q8N8R5 385 aa26.68■■□□□ 1.86
PDLIM1-202ENST00000477757 EIF2S2P20042 333 aaKnown RBP26.67■■□□□ 1.86
PDLIM1-202ENST00000477757 RPS12P25398 132 aaKnown RBP26.67■■□□□ 1.86
PDLIM1-202ENST00000477757 TRMT112Q9UI30 125 aaKnown RBP26.67■■□□□ 1.86
PDLIM1-202ENST00000477757 ADM5C9JUS6 153 aa26.66■■□□□ 1.86
PDLIM1-202ENST00000477757 WASHC4Q2M389 1173 aa26.66■■□□□ 1.86
PDLIM1-202ENST00000477757 ZNF157P51786 506 aaPredicted RBP26.65■■□□□ 1.86
PDLIM1-202ENST00000477757 DBNDD1Q9H9R9 158 aa26.65■■□□□ 1.86
PDLIM1-202ENST00000477757 RNF186Q9NXI6 227 aa26.65■■□□□ 1.86
PDLIM1-202ENST00000477757 MAPK8IP3Q9UPT6 1336 aa26.65■■□□□ 1.86
PDLIM1-202ENST00000477757 TRPA1O75762 1119 aa26.64■■□□□ 1.86
PDLIM1-202ENST00000477757 SLC10A3P09131 477 aa26.64■■□□□ 1.86
PDLIM1-202ENST00000477757 TCIRG1Q13488 830 aa26.64■■□□□ 1.86
PDLIM1-202ENST00000477757 COPS6Q7L5N1 327 aa26.64■■□□□ 1.86
PDLIM1-202ENST00000477757 DCPSQ96C86 337 aaKnown RBP26.64■■□□□ 1.86
PDLIM1-202ENST00000477757 AKAP11Q9UKA4 1901 aa26.63■■□□□ 1.85
PDLIM1-202ENST00000477757 RTL9Q8NET4 1388 aa26.63■■□□□ 1.85
PDLIM1-202ENST00000477757 XAGE3Q8WTP9 111 aa26.63■■□□□ 1.85
PDLIM1-202ENST00000477757 COL4A1P02462 1669 aa26.61■■□□□ 1.85
PDLIM1-202ENST00000477757 POLR2AP24928 1970 aaKnown RBP26.61■■□□□ 1.85
PDLIM1-202ENST00000477757 ECE2O60344 883 aa26.61■■□□□ 1.85
PDLIM1-202ENST00000477757 AIMP1Q12904 312 aaKnown RBP26.61■■□□□ 1.85
PDLIM1-202ENST00000477757 PRPF38BQ5VTL8 546 aaKnown RBP26.61■■□□□ 1.85
PDLIM1-202ENST00000477757 BABAM1Q9NWV8 329 aa26.61■■□□□ 1.85
PDLIM1-202ENST00000477757 NSFL1CQ9UNZ2 370 aaKnown RBP26.61■■□□□ 1.85
PDLIM1-202ENST00000477757 KIF4BQ2VIQ3 1234 aa26.6■■□□□ 1.85
PDLIM1-202ENST00000477757 CTU1Q7Z7A3 348 aaKnown RBP26.6■■□□□ 1.85
PDLIM1-202ENST00000477757 GGA3Q9NZ52 723 aa26.6■■□□□ 1.85
PDLIM1-202ENST00000477757 POLLQ9UGP5 575 aa26.6■■□□□ 1.85
PDLIM1-202ENST00000477757 CELF1Q92879 486 aaKnown RBP26.59■■□□□ 1.85
PDLIM1-202ENST00000477757 CSRNP1Q96S65 589 aa26.59■■□□□ 1.85
PDLIM1-202ENST00000477757 PNNQ9H307 717 aaKnown RBP26.59■■□□□ 1.85
PDLIM1-202ENST00000477757 C6orf229H3BNL8 230 aa26.58■■□□□ 1.85
PDLIM1-202ENST00000477757 RIMBP2O15034 1052 aa26.58■■□□□ 1.85
PDLIM1-202ENST00000477757 RBM26Q5T8P6 1007 aaKnown RBP26.58■■□□□ 1.85
PDLIM1-202ENST00000477757 SULF1Q8IWU6 871 aa26.58■■□□□ 1.85
PDLIM1-202ENST00000477757 KCNQ5Q9NR82 932 aa26.58■■□□□ 1.85
PDLIM1-202ENST00000477757 ZNF609O15014 1411 aa26.57■■□□□ 1.84
PDLIM1-202ENST00000477757 GPSM2P81274 684 aa26.57■■□□□ 1.84
PDLIM1-202ENST00000477757 SF3B3Q15393 1217 aaKnown RBP26.57■■□□□ 1.84
PDLIM1-202ENST00000477757 REM2Q8IYK8 340 aaPredicted RBP26.57■■□□□ 1.84
PDLIM1-202ENST00000477757 EYA3Q99504 573 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms