RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 ALDH1L2Q3SY69 923 aa12.45□□□□□ -0.42
NIFK-205ENST00000477693 DNAAF4Q8WXU2 420 aa12.45□□□□□ -0.42
NIFK-205ENST00000477693 CRAMP1Q96RY5 1269 aa12.45□□□□□ -0.42
NIFK-205ENST00000477693 GPBP1L1Q9HC44 474 aaPredicted RBP12.45□□□□□ -0.42
NIFK-205ENST00000477693 LAMB2P55268 1798 aa12.45□□□□□ -0.42
NIFK-205ENST00000477693 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
NIFK-205ENST00000477693 LTBP3Q9NS15 1303 aa12.44□□□□□ -0.42
NIFK-205ENST00000477693 NEURL1BA8MQ27 555 aa12.44□□□□□ -0.42
NIFK-205ENST00000477693 HSP90B1P14625 803 aaKnown RBP12.44□□□□□ -0.42
NIFK-205ENST00000477693 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
NIFK-205ENST00000477693 MRPL50Q8N5N7 158 aaKnown RBP12.44□□□□□ -0.42
NIFK-205ENST00000477693 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.44□□□□□ -0.42
NIFK-205ENST00000477693 SSH1Q8WYL5 1049 aa12.44□□□□□ -0.42
NIFK-205ENST00000477693 RBM17Q96I25 401 aaKnown RBP12.44□□□□□ -0.42
NIFK-205ENST00000477693 CDHR2Q9BYE9 1310 aa12.43□□□□□ -0.42
NIFK-205ENST00000477693 NFKBIEO00221 500 aa12.43□□□□□ -0.42
NIFK-205ENST00000477693 IRS4O14654 1257 aaPredicted RBP12.43□□□□□ -0.42
NIFK-205ENST00000477693 RASSF7Q02833 373 aa12.43□□□□□ -0.42
NIFK-205ENST00000477693 SF3B3Q15393 1217 aaKnown RBP12.43□□□□□ -0.42
NIFK-205ENST00000477693 CWF19L2Q2TBE0 894 aaKnown RBP12.43□□□□□ -0.42
NIFK-205ENST00000477693 RTL5Q5HYW3 569 aaPredicted RBP12.43□□□□□ -0.42
NIFK-205ENST00000477693 LINS1Q8NG48 757 aa12.43□□□□□ -0.42
NIFK-205ENST00000477693 SNED1Q8TER0 1413 aa12.43□□□□□ -0.42
NIFK-205ENST00000477693 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
NIFK-205ENST00000477693 FER1L6Q2WGJ9 1857 aa12.42□□□□□ -0.42
NIFK-205ENST00000477693 ABCC4O15439 1325 aa12.42□□□□□ -0.42
NIFK-205ENST00000477693 PTPRCP08575 1304 aa12.42□□□□□ -0.42
NIFK-205ENST00000477693 F6X3S4 739 aa12.42□□□□□ -0.42
NIFK-205ENST00000477693 GCKRQ14397 625 aa12.42□□□□□ -0.42
NIFK-205ENST00000477693 CCDC93Q567U6 631 aa12.42□□□□□ -0.42
NIFK-205ENST00000477693 BEND3Q5T5X7 828 aa12.42□□□□□ -0.42
NIFK-205ENST00000477693 C9orf131Q5VYM1 1079 aa12.42□□□□□ -0.42
NIFK-205ENST00000477693 ERICH6BQ5W0A0 696 aa12.42□□□□□ -0.42
NIFK-205ENST00000477693 H7C1W4 665 aa12.41□□□□□ -0.42
NIFK-205ENST00000477693 PPEF1O14829 653 aaPredicted RBP12.41□□□□□ -0.42
NIFK-205ENST00000477693 PDE8AO60658 829 aa12.41□□□□□ -0.42
NIFK-205ENST00000477693 NEFLP07196 543 aa12.41□□□□□ -0.42
NIFK-205ENST00000477693 LMNB1P20700 586 aa12.41□□□□□ -0.42
NIFK-205ENST00000477693 BRPF1P55201 1214 aaPredicted RBP12.41□□□□□ -0.42
NIFK-205ENST00000477693 GRAPQ13588 217 aa12.41□□□□□ -0.42
NIFK-205ENST00000477693 CC2D2BQ6DHV5 1058 aa12.41□□□□□ -0.42
NIFK-205ENST00000477693 DDX46Q7L014 1031 aaKnown RBP12.41□□□□□ -0.42
NIFK-205ENST00000477693 GRAPLQ8TC17 118 aaPredicted RBP12.41□□□□□ -0.42
NIFK-205ENST00000477693 TAOK3Q9H2K8 898 aa12.41□□□□□ -0.42
NIFK-205ENST00000477693 ZC3H4Q9UPT8 1303 aaKnown RBP12.4□□□□□ -0.42
NIFK-205ENST00000477693 BBOX1O75936 387 aa12.4□□□□□ -0.42
NIFK-205ENST00000477693 MS4A1P11836 297 aa12.4□□□□□ -0.42
NIFK-205ENST00000477693 PRELPP51888 382 aa12.4□□□□□ -0.42
NIFK-205ENST00000477693 CASP7P55210 303 aa12.4□□□□□ -0.42
NIFK-205ENST00000477693 GRIPAP1Q4V328 841 aa12.4□□□□□ -0.42
NIFK-205ENST00000477693 OLFM4Q6UX06 510 aa12.4□□□□□ -0.42
NIFK-205ENST00000477693 RTKN2Q8IZC4 609 aa12.4□□□□□ -0.42
NIFK-205ENST00000477693 BCL2L13Q9BXK5 485 aa12.4□□□□□ -0.42
NIFK-205ENST00000477693 SMC4Q9NTJ3 1288 aa12.4□□□□□ -0.42
NIFK-205ENST00000477693 RNF181Q9P0P0 153 aa12.4□□□□□ -0.42
NIFK-205ENST00000477693 SBF1O95248 1867 aa12.4□□□□□ -0.42
NIFK-205ENST00000477693 ALDH1L1O75891 902 aa12.39□□□□□ -0.43
NIFK-205ENST00000477693 RARSP54136 660 aaKnown RBP12.39□□□□□ -0.43
NIFK-205ENST00000477693 FKBP4Q02790 459 aaKnown RBP eCLIP12.39□□□□□ -0.43
NIFK-205ENST00000477693 UBE3BQ7Z3V4 1068 aa12.39□□□□□ -0.43
NIFK-205ENST00000477693 TMC4Q7Z404 712 aa12.39□□□□□ -0.43
NIFK-205ENST00000477693 PLA2G12BQ9BX93 195 aa12.39□□□□□ -0.43
NIFK-205ENST00000477693 CREBZFQ9NS37 354 aa12.39□□□□□ -0.43
NIFK-205ENST00000477693 ATP6V0A2Q9Y487 856 aa12.39□□□□□ -0.43
NIFK-205ENST00000477693 IPO8O15397 1037 aaKnown RBP12.38□□□□□ -0.43
NIFK-205ENST00000477693 CCDC152Q4G0S7 254 aa12.38□□□□□ -0.43
NIFK-205ENST00000477693 JARID2Q92833 1246 aaPredicted RBP12.38□□□□□ -0.43
NIFK-205ENST00000477693 PSMD1Q99460 953 aa12.38□□□□□ -0.43
NIFK-205ENST00000477693 SRCIN1Q9C0H9 1055 aa12.38□□□□□ -0.43
NIFK-205ENST00000477693 SUPT16HQ9Y5B9 1047 aaKnown RBP12.38□□□□□ -0.43
NIFK-205ENST00000477693 CTSWP56202 376 aa12.37□□□□□ -0.43
NIFK-205ENST00000477693 SLC4A10Q6U841 1118 aa12.37□□□□□ -0.43
NIFK-205ENST00000477693 SP8Q8IXZ3 490 aa12.37□□□□□ -0.43
NIFK-205ENST00000477693 TTLL11Q8NHH1 800 aa12.37□□□□□ -0.43
NIFK-205ENST00000477693 ZNF526Q8TF50 670 aaPredicted RBP12.37□□□□□ -0.43
NIFK-205ENST00000477693 CELF1Q92879 486 aaKnown RBP12.37□□□□□ -0.43
NIFK-205ENST00000477693 RTL9Q8NET4 1388 aa12.37□□□□□ -0.43
NIFK-205ENST00000477693 LRRC37AA6NMS7 1700 aa12.37□□□□□ -0.43
NIFK-205ENST00000477693 KIF16BQ96L93 1317 aa12.37□□□□□ -0.43
NIFK-205ENST00000477693 COL4A1P02462 1669 aa12.36□□□□□ -0.43
NIFK-205ENST00000477693 GRM8O00222 908 aa12.36□□□□□ -0.43
NIFK-205ENST00000477693 EVX2Q03828 476 aa12.36□□□□□ -0.43
NIFK-205ENST00000477693 SLC51AQ86UW1 340 aa12.36□□□□□ -0.43
NIFK-205ENST00000477693 ARHGAP45Q92619 1136 aa12.36□□□□□ -0.43
NIFK-205ENST00000477693 TMX4Q9H1E5 349 aaPredicted RBP12.36□□□□□ -0.43
NIFK-205ENST00000477693 TIAM2Q8IVF5 1701 aa12.36□□□□□ -0.43
NIFK-205ENST00000477693 UTYO14607 1347 aa12.36□□□□□ -0.43
NIFK-205ENST00000477693 CSF1RP07333 972 aa12.35□□□□□ -0.43
NIFK-205ENST00000477693 RPS8P62241 208 aaKnown RBP12.35□□□□□ -0.43
NIFK-205ENST00000477693 PDE3AQ14432 1141 aa12.35□□□□□ -0.43
NIFK-205ENST00000477693 RTFDC1Q9BY42 306 aaPredicted RBP12.35□□□□□ -0.43
NIFK-205ENST00000477693 SEC31BQ9NQW1 1179 aa12.35□□□□□ -0.43
NIFK-205ENST00000477693 ZNF277Q9NRM2 450 aaPredicted RBP12.35□□□□□ -0.43
NIFK-205ENST00000477693 NOB1Q9ULX3 412 aaKnown RBP12.35□□□□□ -0.43
NIFK-205ENST00000477693 MYH3P11055 1940 aa12.35□□□□□ -0.43
NIFK-205ENST00000477693 DICER1Q9UPY3 1922 aaKnown RBP12.35□□□□□ -0.43
NIFK-205ENST00000477693 IARSP41252 1262 aaKnown RBP12.34□□□□□ -0.43
NIFK-205ENST00000477693 APLP1P51693 650 aa12.34□□□□□ -0.43
NIFK-205ENST00000477693 RRP1P56182 461 aaKnown RBP12.34□□□□□ -0.43
NIFK-205ENST00000477693 AAMPQ13685 434 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms