RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 SIPA1L3O60292 1781 aaPredicted RBP15.98■□□□□ 0.15
HLA-DMA-208ENST00000477541 CPA1P15085 419 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 LIG1P18858 919 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 PTGS1P23219 599 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 ANO6Q4KMQ2 910 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 AMOTQ4VCS5 1084 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 USPL1Q5W0Q7 1092 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 AACSQ86V21 672 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 SPC24Q8NBT2 197 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 IP6K1Q92551 441 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 MRFAP1L1Q96HT8 127 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 LLPHQ9BRT6 129 aaKnown RBP15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 DACT1Q9NYF0 836 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 ADAMTS7Q9UKP4 1686 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 KIF2AO00139 706 aaPredicted RBP15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 DDX58O95786 925 aaKnown RBP15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 G3BP1Q13283 466 aaKnown RBP eCLIP15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 NMIQ13287 307 aaPredicted RBP15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 TAF3Q5VWG9 929 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 ZSCAN25Q6NSZ9 544 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 CCDC186Q7Z3E2 898 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 LINS1Q8NG48 757 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 RBM33Q96EV2 1170 aaKnown RBP15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 TRIM5Q9C035 493 aa15.97■□□□□ 0.15
HLA-DMA-208ENST00000477541 AHDC1Q5TGY3 1603 aaPredicted RBP15.96■□□□□ 0.15
HLA-DMA-208ENST00000477541 EIF2S2P20042 333 aaKnown RBP15.96■□□□□ 0.15
HLA-DMA-208ENST00000477541 FAM193AP78312 1265 aa15.96■□□□□ 0.15
HLA-DMA-208ENST00000477541 GABPB1Q06547 395 aaPredicted RBP15.96■□□□□ 0.15
HLA-DMA-208ENST00000477541 TEFQ10587 303 aa15.96■□□□□ 0.15
HLA-DMA-208ENST00000477541 CAMTA1Q9Y6Y1 1673 aa15.96■□□□□ 0.14
HLA-DMA-208ENST00000477541 NUTM2FA1L443 756 aa15.95■□□□□ 0.14
HLA-DMA-208ENST00000477541 ZNF165P49910 485 aa15.95■□□□□ 0.14
HLA-DMA-208ENST00000477541 LUZP1Q86V48 1076 aa15.95■□□□□ 0.14
HLA-DMA-208ENST00000477541 DRC7Q8IY82 874 aa15.95■□□□□ 0.14
HLA-DMA-208ENST00000477541 MPNDQ8N594 471 aa15.95■□□□□ 0.14
HLA-DMA-208ENST00000477541 RBM6P78332 1123 aaKnown RBP15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 TOB2Q14106 344 aaPredicted RBP15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 ATP2B3Q16720 1220 aa15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 PLEKHO1Q53GL0 409 aaPredicted RBP15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 NECAB1Q8N987 351 aa15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 CCDC112Q8NEF3 446 aa15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 GTF3C6Q969F1 213 aa15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 LARP6Q9BRS8 491 aaKnown RBP15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 BTBD11A6QL63 1104 aa15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 GOLGA6L19H0YKK7 550 aa15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 GRM8O00222 908 aa15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 TNNT1P13805 278 aa15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 NCBP1Q09161 790 aaKnown RBP15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 RESTQ13127 1097 aa15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 STX1AQ16623 288 aa15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 NAA16Q6N069 864 aaPredicted RBP15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 SLC26A8Q96RN1 970 aa15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 CLIP2Q9UDT6 1046 aa15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 U3KPZ7 1027 aaPredicted RBP15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 COL15A1P39059 1388 aa15.94■□□□□ 0.14
HLA-DMA-208ENST00000477541 TUBB4AP04350 444 aa15.93■□□□□ 0.14
HLA-DMA-208ENST00000477541 HMGB1P09429 215 aaKnown RBP15.93■□□□□ 0.14
HLA-DMA-208ENST00000477541 CBX1P83916 185 aa15.93■□□□□ 0.14
HLA-DMA-208ENST00000477541 BICD2Q8TD16 824 aa15.93■□□□□ 0.14
HLA-DMA-208ENST00000477541 TSC1Q92574 1164 aa15.93■□□□□ 0.14
HLA-DMA-208ENST00000477541 FSD1Q9BTV5 496 aa15.93■□□□□ 0.14
HLA-DMA-208ENST00000477541 MAP3K2Q9Y2U5 619 aa15.93■□□□□ 0.14
HLA-DMA-208ENST00000477541 LARP1Q6PKG0 1096 aaKnown RBP15.92■□□□□ 0.14
HLA-DMA-208ENST00000477541 CREBRFQ8IUR6 639 aa15.92■□□□□ 0.14
HLA-DMA-208ENST00000477541 ABTB2Q8N961 1025 aa15.92■□□□□ 0.14
HLA-DMA-208ENST00000477541 KCNH5Q8NCM2 988 aa15.92■□□□□ 0.14
HLA-DMA-208ENST00000477541 SLFNL1Q499Z3 407 aa15.91■□□□□ 0.14
HLA-DMA-208ENST00000477541 FAM227BQ96M60 508 aa15.91■□□□□ 0.14
HLA-DMA-208ENST00000477541 SASH1O94885 1247 aa15.91■□□□□ 0.14
HLA-DMA-208ENST00000477541 GSDMDP57764 484 aa15.91■□□□□ 0.14
HLA-DMA-208ENST00000477541 IQCB1Q15051 598 aa15.91■□□□□ 0.14
HLA-DMA-208ENST00000477541 CAMK4Q16566 473 aa15.91■□□□□ 0.14
HLA-DMA-208ENST00000477541 FERMT3Q86UX7 667 aa15.91■□□□□ 0.14
HLA-DMA-208ENST00000477541 CKAP2LQ8IYA6 745 aa15.91■□□□□ 0.14
HLA-DMA-208ENST00000477541 SMARCC2Q8TAQ2 1214 aa15.91■□□□□ 0.14
HLA-DMA-208ENST00000477541 EAF2Q96CJ1 260 aaPredicted RBP15.91■□□□□ 0.14
HLA-DMA-208ENST00000477541 CTNNA3Q9UI47 895 aa15.91■□□□□ 0.14
HLA-DMA-208ENST00000477541 A0A0D9SFI3 127 aa15.9■□□□□ 0.14
HLA-DMA-208ENST00000477541 TAF5LO75529 589 aa15.9■□□□□ 0.14
HLA-DMA-208ENST00000477541 ATP5JP18859 108 aa15.9■□□□□ 0.14
HLA-DMA-208ENST00000477541 TPD52L1Q16890 204 aaPredicted RBP15.9■□□□□ 0.14
HLA-DMA-208ENST00000477541 PGBD1Q96JS3 809 aa15.9■□□□□ 0.14
HLA-DMA-208ENST00000477541 NEK1Q96PY6 1258 aa15.9■□□□□ 0.14
HLA-DMA-208ENST00000477541 PRDM10Q9NQV6 1147 aa15.9■□□□□ 0.14
HLA-DMA-208ENST00000477541 RCOR1Q9UKL0 485 aa15.9■□□□□ 0.14
HLA-DMA-208ENST00000477541 H3BQV1 296 aa15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 RNMTO43148 476 aaKnown RBP15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 NR1I2O75469 434 aa15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 KCNJ6P48051 423 aa15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 IFFO2Q5TF58 517 aa15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 NUTM2GQ5VZR2 741 aa15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 CEP135Q66GS9 1140 aa15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 LRRC8AQ8IWT6 810 aa15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 JARID2Q92833 1246 aaPredicted RBP15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 ZNF396Q96N95 335 aaPredicted RBP15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 ARID3AQ99856 593 aa15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 NAT10Q9H0A0 1025 aaKnown RBP15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 DDX21Q9NR30 783 aaKnown RBP eCLIP15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 ANO10Q9NW15 660 aa15.89■□□□□ 0.13
HLA-DMA-208ENST00000477541 IMPACTQ9P2X3 320 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms