RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 C3orf67Q6ZVT6 689 aa20.23■□□□□ 0.83
VHL-203ENST00000477538 CSF1RP07333 972 aa20.22■□□□□ 0.83
VHL-203ENST00000477538 ERICH6BQ5W0A0 696 aa20.22■□□□□ 0.83
VHL-203ENST00000477538 TTLL11Q8NHH1 800 aa20.22■□□□□ 0.83
VHL-203ENST00000477538 CHMP3Q9Y3E7 222 aa20.22■□□□□ 0.83
VHL-203ENST00000477538 PCDHB15Q9Y5E8 787 aa20.22■□□□□ 0.83
VHL-203ENST00000477538 A0A1B0GUL6 1792 aa20.21■□□□□ 0.83
VHL-203ENST00000477538 LRP5O75197 1615 aa20.21■□□□□ 0.83
VHL-203ENST00000477538 PDE6BP35913 854 aa20.21■□□□□ 0.83
VHL-203ENST00000477538 ATP8B2P98198 1209 aa20.21■□□□□ 0.83
VHL-203ENST00000477538 MTX1Q13505 466 aa20.21■□□□□ 0.83
VHL-203ENST00000477538 SF3B3Q15393 1217 aaKnown RBP20.21■□□□□ 0.83
VHL-203ENST00000477538 CCDC152Q4G0S7 254 aa20.21■□□□□ 0.83
VHL-203ENST00000477538 RPAP2Q8IXW5 612 aaPredicted RBP20.21■□□□□ 0.83
VHL-203ENST00000477538 CCDC85AQ96PX6 553 aaPredicted RBP20.21■□□□□ 0.83
VHL-203ENST00000477538 FAM161AQ3B820 660 aa20.2■□□□□ 0.82
VHL-203ENST00000477538 RTL9Q8NET4 1388 aa20.2■□□□□ 0.82
VHL-203ENST00000477538 COL4A1P02462 1669 aa20.19■□□□□ 0.82
VHL-203ENST00000477538 PNMA6EA0A0J9YXQ4 647 aa20.19■□□□□ 0.82
VHL-203ENST00000477538 KLRG2A4D1S0 409 aaPredicted RBP20.19■□□□□ 0.82
VHL-203ENST00000477538 SRGAP3O43295 1099 aa20.19■□□□□ 0.82
VHL-203ENST00000477538 CRY2Q49AN0 593 aa20.19■□□□□ 0.82
VHL-203ENST00000477538 GREM2Q9H772 168 aa20.19■□□□□ 0.82
VHL-203ENST00000477538 SIRT2Q8IXJ6 389 aa20.18■□□□□ 0.82
VHL-203ENST00000477538 RPGRQ92834 1020 aaKnown RBP20.18■□□□□ 0.82
VHL-203ENST00000477538 SLX4Q8IY92 1834 aa20.18■□□□□ 0.82
VHL-203ENST00000477538 ITGA6P23229 1130 aa20.17■□□□□ 0.82
VHL-203ENST00000477538 IFIT5Q13325 482 aaKnown RBP20.17■□□□□ 0.82
VHL-203ENST00000477538 CCDC57Q2TAC2 916 aa20.17■□□□□ 0.82
VHL-203ENST00000477538 SSH3Q8TE77 659 aa20.17■□□□□ 0.82
VHL-203ENST00000477538 PDZRN3Q9UPQ7 1066 aa20.17■□□□□ 0.82
VHL-203ENST00000477538 ANKRD18BA2A2Z9 1011 aa20.16■□□□□ 0.82
VHL-203ENST00000477538 HMMRO75330 724 aa20.16■□□□□ 0.82
VHL-203ENST00000477538 POLA2Q14181 598 aa20.16■□□□□ 0.82
VHL-203ENST00000477538 C2CD5Q86YS7 1000 aa20.16■□□□□ 0.82
VHL-203ENST00000477538 SRGNP10124 158 aa20.15■□□□□ 0.82
VHL-203ENST00000477538 NPR1P16066 1061 aa20.15■□□□□ 0.82
VHL-203ENST00000477538 DDX46Q7L014 1031 aaKnown RBP20.15■□□□□ 0.82
VHL-203ENST00000477538 KLHL34Q8N239 644 aa20.15■□□□□ 0.82
VHL-203ENST00000477538 RBM17Q96I25 401 aaKnown RBP20.15■□□□□ 0.82
VHL-203ENST00000477538 SEC31BQ9NQW1 1179 aa20.15■□□□□ 0.82
VHL-203ENST00000477538 PPP1R1BQ9UD71 204 aaPredicted RBP20.15■□□□□ 0.82
VHL-203ENST00000477538 LRRC37AA6NMS7 1700 aa20.15■□□□□ 0.82
VHL-203ENST00000477538 H0YIN7 160 aa20.14■□□□□ 0.81
VHL-203ENST00000477538 RFX5P48382 616 aaPredicted RBP20.14■□□□□ 0.81
VHL-203ENST00000477538 TAF7LQ5H9L4 462 aa20.14■□□□□ 0.81
VHL-203ENST00000477538 CDC5LQ99459 802 aaKnown RBP20.14■□□□□ 0.81
VHL-203ENST00000477538 CD2APQ9Y5K6 639 aa20.14■□□□□ 0.81
VHL-203ENST00000477538 ARFGEF1Q9Y6D6 1849 aa20.13■□□□□ 0.81
VHL-203ENST00000477538 CHRNA5P30532 468 aa20.13■□□□□ 0.81
VHL-203ENST00000477538 HOXA10P31260 410 aaPredicted RBP20.13■□□□□ 0.81
VHL-203ENST00000477538 HDAC1Q13547 482 aaPredicted RBP20.13■□□□□ 0.81
VHL-203ENST00000477538 MASTLQ96GX5 879 aa20.13■□□□□ 0.81
VHL-203ENST00000477538 TGFB2P61812 414 aa20.12■□□□□ 0.81
VHL-203ENST00000477538 PTPN12Q05209 780 aaKnown RBP20.12■□□□□ 0.81
VHL-203ENST00000477538 STYK1Q6J9G0 422 aa20.12■□□□□ 0.81
VHL-203ENST00000477538 KLHDC4Q8TBB5 520 aa20.12■□□□□ 0.81
VHL-203ENST00000477538 ZNF594Q96JF6 807 aaPredicted RBP20.12■□□□□ 0.81
VHL-203ENST00000477538 CRAMP1Q96RY5 1269 aa20.12■□□□□ 0.81
VHL-203ENST00000477538 RWDD1Q9H446 243 aaPredicted RBP20.12■□□□□ 0.81
VHL-203ENST00000477538 PPP4R2Q9NY27 417 aa20.12■□□□□ 0.81
VHL-203ENST00000477538 PA2G4Q9UQ80 394 aaKnown RBP20.12■□□□□ 0.81
VHL-203ENST00000477538 GRAPQ13588 217 aa20.11■□□□□ 0.81
VHL-203ENST00000477538 ANKRD18AQ8IVF6 992 aa20.11■□□□□ 0.81
VHL-203ENST00000477538 GRAPLQ8TC17 118 aaPredicted RBP20.11■□□□□ 0.81
VHL-203ENST00000477538 CELF1Q92879 486 aaKnown RBP20.11■□□□□ 0.81
VHL-203ENST00000477538 ZNF622Q969S3 477 aaKnown RBP eCLIP20.11■□□□□ 0.81
VHL-203ENST00000477538 COPRSQ9NQ92 184 aa20.11■□□□□ 0.81
VHL-203ENST00000477538 DPEP1P16444 411 aa20.1■□□□□ 0.81
VHL-203ENST00000477538 IGHMBP2P38935 993 aaKnown RBP20.1■□□□□ 0.81
VHL-203ENST00000477538 CCDC136Q96JN2 1154 aa20.1■□□□□ 0.81
VHL-203ENST00000477538 GTF3C3Q9Y5Q9 886 aa20.1■□□□□ 0.81
VHL-203ENST00000477538 A0A0G2JLW4 131 aa20.09■□□□□ 0.81
VHL-203ENST00000477538 SURF6O75683 361 aaKnown RBP20.09■□□□□ 0.81
VHL-203ENST00000477538 IGHDP01880 384 aa20.09■□□□□ 0.81
VHL-203ENST00000477538 ALDH1B1P30837 517 aa20.09■□□□□ 0.81
VHL-203ENST00000477538 RPS8P62241 208 aaKnown RBP20.09■□□□□ 0.81
VHL-203ENST00000477538 MPHOSPH8Q99549 860 aa20.09■□□□□ 0.81
VHL-203ENST00000477538 SIL1Q9H173 461 aa20.09■□□□□ 0.81
VHL-203ENST00000477538 CNKSR1Q969H4 720 aa20.08■□□□□ 0.81
VHL-203ENST00000477538 FHDC1Q9C0D6 1143 aaPredicted RBP20.08■□□□□ 0.81
VHL-203ENST00000477538 EXOC6BQ9Y2D4 811 aa20.08■□□□□ 0.81
VHL-203ENST00000477538 NOP58Q9Y2X3 529 aaKnown RBP20.08■□□□□ 0.81
VHL-203ENST00000477538 EYA2O00167 538 aa20.07■□□□□ 0.8
VHL-203ENST00000477538 KCNA3P22001 575 aa20.07■□□□□ 0.8
VHL-203ENST00000477538 LDHAL6AQ6ZMR3 332 aa20.07■□□□□ 0.8
VHL-203ENST00000477538 PUS3Q9BZE2 481 aaKnown RBP20.07■□□□□ 0.8
VHL-203ENST00000477538 DCTPP1Q9H773 170 aa20.07■□□□□ 0.8
VHL-203ENST00000477538 FBXO3Q9UK99 471 aa20.07■□□□□ 0.8
VHL-203ENST00000477538 LTBP1Q14766 1721 aa20.07■□□□□ 0.8
VHL-203ENST00000477538 BBOX1O75936 387 aa20.06■□□□□ 0.8
VHL-203ENST00000477538 CIAO1O76071 339 aa20.06■□□□□ 0.8
VHL-203ENST00000477538 G3BP1Q13283 466 aaKnown RBP eCLIP20.06■□□□□ 0.8
VHL-203ENST00000477538 OS9Q13438 667 aaPredicted RBP20.06■□□□□ 0.8
VHL-203ENST00000477538 LRRC24Q50LG9 513 aa20.06■□□□□ 0.8
VHL-203ENST00000477538 HSP90AB4PQ58FF6 505 aa20.06■□□□□ 0.8
VHL-203ENST00000477538 B4GALNT3Q6L9W6 998 aa20.06■□□□□ 0.8
VHL-203ENST00000477538 NLGN2Q8NFZ4 835 aa20.06■□□□□ 0.8
VHL-203ENST00000477538 ARAP2Q8WZ64 1704 aa20.06■□□□□ 0.8
VHL-203ENST00000477538 CNNM1Q9NRU3 951 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms