RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 RFX7Q2KHR2 1363 aa25.15■■□□□ 1.62
LIMS2-214ENST00000476932 ATP5J2-PTCD1G3V325 749 aa25.15■■□□□ 1.62
LIMS2-214ENST00000476932 PTCD1O75127 700 aaKnown RBP25.15■■□□□ 1.62
LIMS2-214ENST00000476932 RPS6KB1P23443 525 aa25.15■■□□□ 1.62
LIMS2-214ENST00000476932 TSGA10IPQ3SY00 556 aa25.15■■□□□ 1.62
LIMS2-214ENST00000476932 ZNF500O60304 480 aaPredicted RBP25.14■■□□□ 1.62
LIMS2-214ENST00000476932 TOB2Q14106 344 aaPredicted RBP25.14■■□□□ 1.62
LIMS2-214ENST00000476932 RNF20Q5VTR2 975 aa25.14■■□□□ 1.62
LIMS2-214ENST00000476932 USPL1Q5W0Q7 1092 aa25.14■■□□□ 1.62
LIMS2-214ENST00000476932 TCEANC2Q96MN5 208 aa25.14■■□□□ 1.62
LIMS2-214ENST00000476932 ZKSCAN5Q9Y2L8 839 aa25.14■■□□□ 1.62
LIMS2-214ENST00000476932 PAPPAQ13219 1627 aa25.14■■□□□ 1.61
LIMS2-214ENST00000476932 ZNF609O15014 1411 aa25.14■■□□□ 1.61
LIMS2-214ENST00000476932 OFD1O75665 1012 aa25.14■■□□□ 1.61
LIMS2-214ENST00000476932 BLOC1S2Q6QNY1 142 aa25.14■■□□□ 1.61
LIMS2-214ENST00000476932 SPATA31A3Q5VYP0 1347 aa25.13■■□□□ 1.61
LIMS2-214ENST00000476932 LAMA4Q16363 1823 aa25.13■■□□□ 1.61
LIMS2-214ENST00000476932 A0A087WZG4 1122 aa25.12■■□□□ 1.61
LIMS2-214ENST00000476932 CABP4P57796 275 aa25.12■■□□□ 1.61
LIMS2-214ENST00000476932 PLBD2Q8NHP8 589 aa25.12■■□□□ 1.61
LIMS2-214ENST00000476932 HMG20BQ9P0W2 317 aa25.12■■□□□ 1.61
LIMS2-214ENST00000476932 NDUFB9Q9Y6M9 179 aa25.12■■□□□ 1.61
LIMS2-214ENST00000476932 VPS37CA5D8V6 355 aaPredicted RBP25.12■■□□□ 1.61
LIMS2-214ENST00000476932 XIRP1Q702N8 1843 aaKnown RBP25.12■■□□□ 1.61
LIMS2-214ENST00000476932 DBNDD2Q9BQY9 259 aa25.11■■□□□ 1.61
LIMS2-214ENST00000476932 CCDC39Q9UFE4 941 aa25.11■■□□□ 1.61
LIMS2-214ENST00000476932 NBPF26B4DH59 902 aa25.11■■□□□ 1.61
LIMS2-214ENST00000476932 CHGBP05060 677 aa25.11■■□□□ 1.61
LIMS2-214ENST00000476932 NBPF14Q5TI25 921 aa25.11■■□□□ 1.61
LIMS2-214ENST00000476932 NBPF10Q6P3W6 841 aaKnown RBP25.11■■□□□ 1.61
LIMS2-214ENST00000476932 NBPF15Q8N660 670 aa25.11■■□□□ 1.61
LIMS2-214ENST00000476932 FAM184AQ8NB25 1140 aa25.11■■□□□ 1.61
LIMS2-214ENST00000476932 SHANK3Q9BYB0 1731 aa25.1■■□□□ 1.61
LIMS2-214ENST00000476932 ANKRD1Q15327 319 aa25.1■■□□□ 1.61
LIMS2-214ENST00000476932 CDC37L1Q7L3B6 337 aa25.1■■□□□ 1.61
LIMS2-214ENST00000476932 FUCA2Q9BTY2 467 aa25.1■■□□□ 1.61
LIMS2-214ENST00000476932 KCPQ6ZWJ8 1503 aa25.1■■□□□ 1.61
LIMS2-214ENST00000476932 LETM1O95202 739 aaPredicted RBP25.09■■□□□ 1.61
LIMS2-214ENST00000476932 TPRNQ4KMQ1 711 aa25.09■■□□□ 1.61
LIMS2-214ENST00000476932 FOXO4P98177 505 aa25.09■■□□□ 1.61
LIMS2-214ENST00000476932 UVSSAQ2YD98 709 aa25.09■■□□□ 1.61
LIMS2-214ENST00000476932 HAUS7Q99871 368 aa25.09■■□□□ 1.61
LIMS2-214ENST00000476932 MCM5P33992 734 aa25.08■■□□□ 1.61
LIMS2-214ENST00000476932 CSPP1Q1MSJ5 1256 aa25.08■■□□□ 1.61
LIMS2-214ENST00000476932 LARP1BQ659C4 914 aaKnown RBP25.08■■□□□ 1.61
LIMS2-214ENST00000476932 LMBR1LQ6UX01 489 aa25.07■■□□□ 1.6
LIMS2-214ENST00000476932 H7C1W4 665 aa25.07■■□□□ 1.6
LIMS2-214ENST00000476932 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.07■■□□□ 1.6
LIMS2-214ENST00000476932 CCDC129Q6ZRS4 1044 aa25.07■■□□□ 1.6
LIMS2-214ENST00000476932 CADPS2Q86UW7 1296 aa25.07■■□□□ 1.6
LIMS2-214ENST00000476932 HCLS1P14317 486 aaPredicted RBP25.06■■□□□ 1.6
LIMS2-214ENST00000476932 SEC62Q99442 399 aaKnown RBP25.06■■□□□ 1.6
LIMS2-214ENST00000476932 DNAJC2Q99543 621 aaKnown RBP25.06■■□□□ 1.6
LIMS2-214ENST00000476932 ATG9AQ7Z3C6 839 aa25.05■■□□□ 1.6
LIMS2-214ENST00000476932 TTC6Q86TZ1 520 aa25.05■■□□□ 1.6
LIMS2-214ENST00000476932 PDIA4P13667 645 aaKnown RBP25.05■■□□□ 1.6
LIMS2-214ENST00000476932 TTLL7Q6ZT98 887 aa25.05■■□□□ 1.6
LIMS2-214ENST00000476932 FERMT3Q86UX7 667 aa25.04■■□□□ 1.6
LIMS2-214ENST00000476932 KLHL34Q8N239 644 aa25.04■■□□□ 1.6
LIMS2-214ENST00000476932 PDCP20941 246 aa25.03■■□□□ 1.6
LIMS2-214ENST00000476932 KRT32Q14532 448 aa25.03■■□□□ 1.6
LIMS2-214ENST00000476932 GIMAP6Q6P9H5 292 aa25.03■■□□□ 1.6
LIMS2-214ENST00000476932 DDX46Q7L014 1031 aaKnown RBP25.03■■□□□ 1.6
LIMS2-214ENST00000476932 USP25Q9UHP3 1055 aa25.03■■□□□ 1.6
LIMS2-214ENST00000476932 PALLDQ8WX93 1383 aa25.03■■□□□ 1.6
LIMS2-214ENST00000476932 FAM173BQ6P4H8 233 aa25.03■■□□□ 1.6
LIMS2-214ENST00000476932 TPM2P07951 284 aa25.02■■□□□ 1.6
LIMS2-214ENST00000476932 CYP21A2P08686 494 aa25.02■■□□□ 1.6
LIMS2-214ENST00000476932 KBTBD3Q8NAB2 608 aa25.02■■□□□ 1.6
LIMS2-214ENST00000476932 U3KPZ7 1027 aaPredicted RBP25.02■■□□□ 1.6
LIMS2-214ENST00000476932 ELP1O95163 1332 aa25.02■■□□□ 1.6
LIMS2-214ENST00000476932 SH3TC1Q8TE82 1336 aa25.02■■□□□ 1.6
LIMS2-214ENST00000476932 PCDH11XQ9BZA7 1347 aa25.02■■□□□ 1.6
LIMS2-214ENST00000476932 PCDH11YQ9BZA8 1340 aa25.02■■□□□ 1.6
LIMS2-214ENST00000476932 KRT85P78386 507 aa25.02■■□□□ 1.6
LIMS2-214ENST00000476932 STK3Q13188 491 aa25.02■■□□□ 1.6
LIMS2-214ENST00000476932 MCMDC2Q4G0Z9 681 aa25.02■■□□□ 1.6
LIMS2-214ENST00000476932 NEK1Q96PY6 1258 aa25.02■■□□□ 1.6
LIMS2-214ENST00000476932 GTF3C6Q969F1 213 aa25.01■■□□□ 1.59
LIMS2-214ENST00000476932 WDR17Q8IZU2 1322 aa25.01■■□□□ 1.59
LIMS2-214ENST00000476932 ABCA3Q99758 1704 aa25.01■■□□□ 1.59
LIMS2-214ENST00000476932 MYH15Q9Y2K3 1946 aa25.01■■□□□ 1.59
LIMS2-214ENST00000476932 CWC25Q9NXE8 425 aaPredicted RBP25.01■■□□□ 1.59
LIMS2-214ENST00000476932 COL5A2P05997 1499 aaPredicted RBP25■■□□□ 1.59
LIMS2-214ENST00000476932 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25■■□□□ 1.59
LIMS2-214ENST00000476932 SPEF2Q9C093 1822 aa25■■□□□ 1.59
LIMS2-214ENST00000476932 TOGARAM1Q9Y4F4 1720 aa25■■□□□ 1.59
LIMS2-214ENST00000476932 TNS2Q63HR2 1409 aa25■■□□□ 1.59
LIMS2-214ENST00000476932 STOX1Q6ZVD7 989 aa24.99■■□□□ 1.59
LIMS2-214ENST00000476932 CHMP3Q9Y3E7 222 aa24.99■■□□□ 1.59
LIMS2-214ENST00000476932 JAK2O60674 1132 aa24.98■■□□□ 1.59
LIMS2-214ENST00000476932 A1BGP04217 495 aa24.98■■□□□ 1.59
LIMS2-214ENST00000476932 ZCRB1Q8TBF4 217 aaKnown RBP24.98■■□□□ 1.59
LIMS2-214ENST00000476932 GPR108Q9NPR9 543 aa24.98■■□□□ 1.59
LIMS2-214ENST00000476932 Q6ZUG5 572 aa24.98■■□□□ 1.59
LIMS2-214ENST00000476932 ERVV-2B6SEH9 535 aa24.97■■□□□ 1.59
LIMS2-214ENST00000476932 ADCY5O95622 1261 aa24.97■■□□□ 1.59
LIMS2-214ENST00000476932 PTMAP06454 111 aaKnown RBP24.97■■□□□ 1.59
LIMS2-214ENST00000476932 TERF1P54274 439 aa24.97■■□□□ 1.59
LIMS2-214ENST00000476932 SLFNL1Q499Z3 407 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms