RNA–Protein interactions for RNA: ENST00000476881.2

LRCH4-204, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 1,675 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-204ENST00000476881 PIM2Q9P1W9 311 aa25.4■■□□□ 1.66
LRCH4-204ENST00000476881 HSP90B1P14625 803 aaKnown RBP25.39■■□□□ 1.66
LRCH4-204ENST00000476881 KAZALD1Q96I82 304 aa25.39■■□□□ 1.66
LRCH4-204ENST00000476881 PLA2G12BQ9BX93 195 aa25.39■■□□□ 1.66
LRCH4-204ENST00000476881 ZBTB40Q9NUA8 1239 aa25.39■■□□□ 1.66
LRCH4-204ENST00000476881 PDE8AO60658 829 aa25.39■■□□□ 1.65
LRCH4-204ENST00000476881 HDAC5Q9UQL6 1122 aa25.39■■□□□ 1.65
LRCH4-204ENST00000476881 LRRFIP2Q9Y608 721 aaKnown RBP25.39■■□□□ 1.65
LRCH4-204ENST00000476881 COL11A2P13942 1736 aaPredicted RBP25.39■■□□□ 1.65
LRCH4-204ENST00000476881 MYH3P11055 1940 aa25.38■■□□□ 1.65
LRCH4-204ENST00000476881 RIC1Q4ADV7 1423 aa25.38■■□□□ 1.65
LRCH4-204ENST00000476881 TNRC6CQ9HCJ0 1690 aaKnown RBP25.38■■□□□ 1.65
LRCH4-204ENST00000476881 EPHA10Q5JZY3 1008 aa25.38■■□□□ 1.65
LRCH4-204ENST00000476881 KLRG2A4D1S0 409 aaPredicted RBP25.37■■□□□ 1.65
LRCH4-204ENST00000476881 GNAI2P04899 355 aa25.37■■□□□ 1.65
LRCH4-204ENST00000476881 YBX3P16989 372 aaKnown RBP eCLIP25.37■■□□□ 1.65
LRCH4-204ENST00000476881 B4GALNT3Q6L9W6 998 aa25.37■■□□□ 1.65
LRCH4-204ENST00000476881 C3orf67Q6ZVT6 689 aa25.37■■□□□ 1.65
LRCH4-204ENST00000476881 NLRP3Q96P20 1036 aa25.37■■□□□ 1.65
LRCH4-204ENST00000476881 SRGNP10124 158 aa25.36■■□□□ 1.65
LRCH4-204ENST00000476881 FOXO4P98177 505 aa25.36■■□□□ 1.65
LRCH4-204ENST00000476881 ZNF622Q969S3 477 aaKnown RBP eCLIP25.36■■□□□ 1.652e-6■□□□□ 8.2
LRCH4-204ENST00000476881 C1orf115Q9H7X2 142 aa25.36■■□□□ 1.65
LRCH4-204ENST00000476881 CCDC136Q96JN2 1154 aa25.36■■□□□ 1.65
LRCH4-204ENST00000476881 BICC1Q9H694 974 aaKnown RBP25.36■■□□□ 1.65
LRCH4-204ENST00000476881 BCS1LQ9Y276 419 aa25.36■■□□□ 1.65
LRCH4-204ENST00000476881 CTSWP56202 376 aa25.35■■□□□ 1.65
LRCH4-204ENST00000476881 DALRD3Q5D0E6 543 aaKnown RBP25.34■■□□□ 1.65
LRCH4-204ENST00000476881 MASTLQ96GX5 879 aa25.34■■□□□ 1.65
LRCH4-204ENST00000476881 CACNA1SQ13698 1873 aa25.34■■□□□ 1.65
LRCH4-204ENST00000476881 ANKRD44Q8N8A2 993 aa25.33■■□□□ 1.65
LRCH4-204ENST00000476881 TTLL11Q8NHH1 800 aa25.33■■□□□ 1.65
LRCH4-204ENST00000476881 CSF1RP07333 972 aa25.32■■□□□ 1.64
LRCH4-204ENST00000476881 SF3B3Q15393 1217 aaKnown RBP25.32■■□□□ 1.64
LRCH4-204ENST00000476881 RABL6Q3YEC7 729 aaPredicted RBP25.32■■□□□ 1.64
LRCH4-204ENST00000476881 STYK1Q6J9G0 422 aa25.32■■□□□ 1.64
LRCH4-204ENST00000476881 LMBR1LQ6UX01 489 aa25.32■■□□□ 1.64
LRCH4-204ENST00000476881 TTLL6Q8N841 843 aa25.32■■□□□ 1.64
LRCH4-204ENST00000476881 ARFGEF1Q9Y6D6 1849 aa25.32■■□□□ 1.64
LRCH4-204ENST00000476881 NPR1P16066 1061 aa25.32■■□□□ 1.64
LRCH4-204ENST00000476881 CRY2Q49AN0 593 aa25.32■■□□□ 1.64
LRCH4-204ENST00000476881 CCDC85AQ96PX6 553 aaPredicted RBP25.32■■□□□ 1.64
LRCH4-204ENST00000476881 GRIN3BO60391 1043 aa25.3■■□□□ 1.64
LRCH4-204ENST00000476881 AAMPQ13685 434 aa25.3■■□□□ 1.64
LRCH4-204ENST00000476881 CCDC152Q4G0S7 254 aa25.3■■□□□ 1.64
LRCH4-204ENST00000476881 CNKSR1Q969H4 720 aa25.3■■□□□ 1.64
LRCH4-204ENST00000476881 CHMP3Q9Y3E7 222 aa25.29■■□□□ 1.64
LRCH4-204ENST00000476881 RPGRQ92834 1020 aaKnown RBP25.29■■□□□ 1.64
LRCH4-204ENST00000476881 GREM2Q9H772 168 aa25.29■■□□□ 1.64
LRCH4-204ENST00000476881 SLX4Q8IY92 1834 aa25.29■■□□□ 1.64
LRCH4-204ENST00000476881 FAM161AQ3B820 660 aa25.28■■□□□ 1.64
LRCH4-204ENST00000476881 MTX1Q13505 466 aa25.27■■□□□ 1.64
LRCH4-204ENST00000476881 CEP85Q6P2H3 762 aa25.27■■□□□ 1.64
LRCH4-204ENST00000476881 ALDH1B1P30837 517 aa25.26■■□□□ 1.63
LRCH4-204ENST00000476881 HOXA10P31260 410 aaPredicted RBP25.26■■□□□ 1.63
LRCH4-204ENST00000476881 ATP8B2P98198 1209 aa25.26■■□□□ 1.63
LRCH4-204ENST00000476881 RBM17Q96I25 401 aaKnown RBP25.26■■□□□ 1.63
LRCH4-204ENST00000476881 RTL9Q8NET4 1388 aa25.25■■□□□ 1.63
LRCH4-204ENST00000476881 TAF1P21675 1872 aa25.25■■□□□ 1.63
LRCH4-204ENST00000476881 ITGA6P23229 1130 aa25.25■■□□□ 1.63
LRCH4-204ENST00000476881 PRPF40BQ6NWY9 871 aaKnown RBP25.25■■□□□ 1.63
LRCH4-204ENST00000476881 DDX46Q7L014 1031 aaKnown RBP25.25■■□□□ 1.63
LRCH4-204ENST00000476881 RPAP2Q8IXW5 612 aaPredicted RBP25.25■■□□□ 1.63
LRCH4-204ENST00000476881 SEC31BQ9NQW1 1179 aa25.25■■□□□ 1.63
LRCH4-204ENST00000476881 PCDHB15Q9Y5E8 787 aa25.25■■□□□ 1.63
LRCH4-204ENST00000476881 CHD4Q14839 1912 aa25.24■■□□□ 1.63
LRCH4-204ENST00000476881 PNMA6EA0A0J9YXQ4 647 aa25.24■■□□□ 1.63
LRCH4-204ENST00000476881 SRGAP3O43295 1099 aa25.24■■□□□ 1.63
LRCH4-204ENST00000476881 IFIT5Q13325 482 aaKnown RBP25.24■■□□□ 1.63
LRCH4-204ENST00000476881 CCDC57Q2TAC2 916 aa25.23■■□□□ 1.63
LRCH4-204ENST00000476881 ZNF219Q9P2Y4 722 aaPredicted RBP25.23■■□□□ 1.63
LRCH4-204ENST00000476881 ANKRD18BA2A2Z9 1011 aa25.23■■□□□ 1.63
LRCH4-204ENST00000476881 SIRT2Q8IXJ6 389 aa25.23■■□□□ 1.63
LRCH4-204ENST00000476881 CRAMP1Q96RY5 1269 aa25.23■■□□□ 1.63
LRCH4-204ENST00000476881 C21orf2O43822 256 aa25.22■■□□□ 1.63
LRCH4-204ENST00000476881 ARHGAP27Q6ZUM4 889 aa25.22■■□□□ 1.63
LRCH4-204ENST00000476881 RFX5P48382 616 aaPredicted RBP25.21■■□□□ 1.63
LRCH4-204ENST00000476881 COL4A1P02462 1669 aa25.2■■□□□ 1.63
LRCH4-204ENST00000476881 POLA2Q14181 598 aa25.2■■□□□ 1.63
LRCH4-204ENST00000476881 SSH3Q8TE77 659 aa25.2■■□□□ 1.63
LRCH4-204ENST00000476881 CELF1Q92879 486 aaKnown RBP25.2■■□□□ 1.63
LRCH4-204ENST00000476881 GRAPQ13588 217 aa25.2■■□□□ 1.62
LRCH4-204ENST00000476881 GRAPLQ8TC17 118 aaPredicted RBP25.2■■□□□ 1.62
LRCH4-204ENST00000476881 CDC5LQ99459 802 aaKnown RBP25.2■■□□□ 1.62
LRCH4-204ENST00000476881 KLHDC4Q8TBB5 520 aa25.19■■□□□ 1.62
LRCH4-204ENST00000476881 ZNF594Q96JF6 807 aaPredicted RBP25.19■■□□□ 1.62
LRCH4-204ENST00000476881 RPS8P62241 208 aaKnown RBP25.18■■□□□ 1.62
LRCH4-204ENST00000476881 TAF7LQ5H9L4 462 aa25.18■■□□□ 1.62
LRCH4-204ENST00000476881 C7orf43Q8WVR3 580 aa25.18■■□□□ 1.62
LRCH4-204ENST00000476881 PTPN12Q05209 780 aaKnown RBP25.17■■□□□ 1.62
LRCH4-204ENST00000476881 ANKRD18AQ8IVF6 992 aa25.17■■□□□ 1.62
LRCH4-204ENST00000476881 SPEF2Q9C093 1822 aa25.17■■□□□ 1.62
LRCH4-204ENST00000476881 HMMRO75330 724 aa25.17■■□□□ 1.62
LRCH4-204ENST00000476881 PA2G4Q9UQ80 394 aaKnown RBP25.17■■□□□ 1.62
LRCH4-204ENST00000476881 FER1L6Q2WGJ9 1857 aa25.16■■□□□ 1.62
LRCH4-204ENST00000476881 IGHMBP2P38935 993 aaKnown RBP25.16■■□□□ 1.62
LRCH4-204ENST00000476881 SOGA3Q5TF21 947 aa25.16■■□□□ 1.62
LRCH4-204ENST00000476881 COPRSQ9NQ92 184 aa25.16■■□□□ 1.62
LRCH4-204ENST00000476881 KDM2BQ8NHM5 1336 aa25.15■■□□□ 1.62
LRCH4-204ENST00000476881 PPEF1O14829 653 aaPredicted RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms