RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 PAXIP1Q6ZW49 1069 aaPredicted RBP14.59□□□□□ -0.07
EXOSC1-208ENST00000476234 PPP1R42Q7Z4L9 355 aa14.59□□□□□ -0.07
EXOSC1-208ENST00000476234 ZC3H15Q8WU90 426 aaKnown RBP14.59□□□□□ -0.07
EXOSC1-208ENST00000476234 NLRP3Q96P20 1036 aa14.59□□□□□ -0.07
EXOSC1-208ENST00000476234 CCDC85CA6NKD9 419 aa14.58□□□□□ -0.08
EXOSC1-208ENST00000476234 MYL6BP14649 208 aa14.58□□□□□ -0.08
EXOSC1-208ENST00000476234 BRPF1P55201 1214 aaPredicted RBP14.58□□□□□ -0.08
EXOSC1-208ENST00000476234 PDIA6Q15084 440 aa14.58□□□□□ -0.08
EXOSC1-208ENST00000476234 CHRDL2Q6WN34 429 aa14.58□□□□□ -0.08
EXOSC1-208ENST00000476234 SUPT20HQ8NEM7 779 aa14.58□□□□□ -0.08
EXOSC1-208ENST00000476234 TCERG1O14776 1098 aaKnown RBP14.57□□□□□ -0.08
EXOSC1-208ENST00000476234 BBOX1O75936 387 aa14.57□□□□□ -0.08
EXOSC1-208ENST00000476234 CELF2O95319 508 aaKnown RBP14.57□□□□□ -0.08
EXOSC1-208ENST00000476234 GMPSP49915 693 aaPredicted RBP14.57□□□□□ -0.08
EXOSC1-208ENST00000476234 HIRAP54198 1017 aaPredicted RBP14.57□□□□□ -0.08
EXOSC1-208ENST00000476234 KIAA2012Q0VF49 1180 aa14.57□□□□□ -0.08
EXOSC1-208ENST00000476234 SP8Q8IXZ3 490 aa14.57□□□□□ -0.08
EXOSC1-208ENST00000476234 GLIS2Q9BZE0 524 aaPredicted RBP14.57□□□□□ -0.08
EXOSC1-208ENST00000476234 ABCC4O15439 1325 aa14.57□□□□□ -0.08
EXOSC1-208ENST00000476234 MYBBP1AQ9BQG0 1328 aaKnown RBP14.57□□□□□ -0.08
EXOSC1-208ENST00000476234 GRM1Q13255 1194 aa14.56□□□□□ -0.08
EXOSC1-208ENST00000476234 UTP14AQ9BVJ6 771 aaKnown RBP14.56□□□□□ -0.08
EXOSC1-208ENST00000476234 TMX4Q9H1E5 349 aaPredicted RBP14.56□□□□□ -0.08
EXOSC1-208ENST00000476234 TSKSQ9UJT2 592 aa14.56□□□□□ -0.08
EXOSC1-208ENST00000476234 ANKRD36CQ5JPF3 1778 aa14.55□□□□□ -0.08
EXOSC1-208ENST00000476234 CIAPIN1Q6FI81 312 aa14.55□□□□□ -0.08
EXOSC1-208ENST00000476234 CCDC146Q8IYE0 955 aa14.55□□□□□ -0.08
EXOSC1-208ENST00000476234 MCOLN1Q9GZU1 580 aa14.55□□□□□ -0.08
EXOSC1-208ENST00000476234 LAMB2P55268 1798 aa14.55□□□□□ -0.08
EXOSC1-208ENST00000476234 TMPOP42166 694 aaKnown RBP14.54□□□□□ -0.08
EXOSC1-208ENST00000476234 RIPK4P57078 832 aa14.54□□□□□ -0.08
EXOSC1-208ENST00000476234 TNIP1Q15025 636 aa14.54□□□□□ -0.08
EXOSC1-208ENST00000476234 DPP8Q6V1X1 898 aaPredicted RBP14.54□□□□□ -0.08
EXOSC1-208ENST00000476234 CDC37L1Q7L3B6 337 aa14.54□□□□□ -0.08
EXOSC1-208ENST00000476234 MPNDQ8N594 471 aa14.54□□□□□ -0.08
EXOSC1-208ENST00000476234 PRKRIP1Q9H875 184 aaPredicted RBP14.54□□□□□ -0.08
EXOSC1-208ENST00000476234 DUOX1Q9NRD9 1551 aa14.54□□□□□ -0.08
EXOSC1-208ENST00000476234 MAPK8IP3Q9UPT6 1336 aa14.53□□□□□ -0.08
EXOSC1-208ENST00000476234 NEFMP07197 916 aa14.53□□□□□ -0.08
EXOSC1-208ENST00000476234 DIEXFQ68CQ4 756 aaKnown RBP14.53□□□□□ -0.08
EXOSC1-208ENST00000476234 TRPM4Q8TD43 1214 aa14.53□□□□□ -0.08
EXOSC1-208ENST00000476234 ADAMTS8Q9UP79 889 aa14.53□□□□□ -0.08
EXOSC1-208ENST00000476234 LRRC37AA6NMS7 1700 aa14.52□□□□□ -0.08
EXOSC1-208ENST00000476234 YDJCA8MPS7 323 aa14.52□□□□□ -0.09
EXOSC1-208ENST00000476234 NOGQ13253 232 aa14.52□□□□□ -0.09
EXOSC1-208ENST00000476234 GRAPQ13588 217 aa14.52□□□□□ -0.09
EXOSC1-208ENST00000476234 PROSER3Q2NL68 480 aa14.52□□□□□ -0.09
EXOSC1-208ENST00000476234 TMC4Q7Z404 712 aa14.52□□□□□ -0.09
EXOSC1-208ENST00000476234 NLRP10Q86W26 655 aa14.52□□□□□ -0.09
EXOSC1-208ENST00000476234 GRAPLQ8TC17 118 aaPredicted RBP14.52□□□□□ -0.09
EXOSC1-208ENST00000476234 DPF2Q92785 391 aa14.52□□□□□ -0.09
EXOSC1-208ENST00000476234 BCL2L13Q9BXK5 485 aa14.52□□□□□ -0.09
EXOSC1-208ENST00000476234 BABAM1Q9NWV8 329 aa14.52□□□□□ -0.09
EXOSC1-208ENST00000476234 CNOT7Q9UIV1 285 aaKnown RBP14.52□□□□□ -0.09
EXOSC1-208ENST00000476234 RAD17O75943 681 aa14.51□□□□□ -0.09
EXOSC1-208ENST00000476234 HSP90AB3PQ58FF7 597 aa14.51□□□□□ -0.09
EXOSC1-208ENST00000476234 ZIC5Q96T25 663 aa14.51□□□□□ -0.09
EXOSC1-208ENST00000476234 TRIM35Q9UPQ4 493 aa14.51□□□□□ -0.09
EXOSC1-208ENST00000476234 CASP8AP2Q9UKL3 1982 aa14.51□□□□□ -0.09
EXOSC1-208ENST00000476234 SHTN1A0MZ66 631 aa14.5□□□□□ -0.09
EXOSC1-208ENST00000476234 FAM155AB1AL88 458 aaPredicted RBP14.5□□□□□ -0.09
EXOSC1-208ENST00000476234 HCLS1P14317 486 aaPredicted RBP14.5□□□□□ -0.09
EXOSC1-208ENST00000476234 NEUROD2Q15784 382 aa14.5□□□□□ -0.09
EXOSC1-208ENST00000476234 CCDC184Q52MB2 194 aa14.5□□□□□ -0.09
EXOSC1-208ENST00000476234 PNNQ9H307 717 aaKnown RBP14.5□□□□□ -0.09
EXOSC1-208ENST00000476234 PCDH10Q9P2E7 1040 aa14.5□□□□□ -0.09
EXOSC1-208ENST00000476234 SH3TC1Q8TE82 1336 aa14.49□□□□□ -0.09
EXOSC1-208ENST00000476234 H7C1D1 291 aa14.49□□□□□ -0.09
EXOSC1-208ENST00000476234 ANXA1P04083 346 aa14.49□□□□□ -0.09
EXOSC1-208ENST00000476234 TCIRG1Q13488 830 aa14.49□□□□□ -0.09
EXOSC1-208ENST00000476234 DGKZQ13574 1117 aa14.49□□□□□ -0.09
EXOSC1-208ENST00000476234 KRT24Q2M2I5 525 aa14.49□□□□□ -0.09
EXOSC1-208ENST00000476234 DDX46Q7L014 1031 aaKnown RBP14.49□□□□□ -0.09
EXOSC1-208ENST00000476234 USP48Q86UV5 1035 aa14.49□□□□□ -0.09
EXOSC1-208ENST00000476234 MICALL2Q8IY33 904 aa14.49□□□□□ -0.09
EXOSC1-208ENST00000476234 TSPYL4Q9UJ04 414 aa14.49□□□□□ -0.09
EXOSC1-208ENST00000476234 EIF2S2P20042 333 aaKnown RBP14.48□□□□□ -0.09
EXOSC1-208ENST00000476234 HUNKP57058 714 aa14.48□□□□□ -0.09
EXOSC1-208ENST00000476234 COPS6Q7L5N1 327 aa14.48□□□□□ -0.09
EXOSC1-208ENST00000476234 ZNF408Q9H9D4 720 aa14.48□□□□□ -0.09
EXOSC1-208ENST00000476234 SAGE1Q9NXZ1 904 aa14.48□□□□□ -0.09
EXOSC1-208ENST00000476234 TAF1P21675 1872 aa14.47□□□□□ -0.09
EXOSC1-208ENST00000476234 RGMBQ6NW40 437 aa14.47□□□□□ -0.09
EXOSC1-208ENST00000476234 DLK2Q6UY11 383 aa14.47□□□□□ -0.09
EXOSC1-208ENST00000476234 XAGE3Q8WTP9 111 aa14.47□□□□□ -0.09
EXOSC1-208ENST00000476234 RUNDC1Q96C34 613 aa14.47□□□□□ -0.09
EXOSC1-208ENST00000476234 TRMT112Q9UI30 125 aaKnown RBP14.47□□□□□ -0.09
EXOSC1-208ENST00000476234 ZBTB12Q9Y330 459 aaPredicted RBP14.47□□□□□ -0.09
EXOSC1-208ENST00000476234 PSMD14O00487 310 aa14.46□□□□□ -0.09
EXOSC1-208ENST00000476234 EGFRP00533 1210 aa14.46□□□□□ -0.09
EXOSC1-208ENST00000476234 RPS12P25398 132 aaKnown RBP14.46□□□□□ -0.09
EXOSC1-208ENST00000476234 SF3B3Q15393 1217 aaKnown RBP14.46□□□□□ -0.09
EXOSC1-208ENST00000476234 WASHC4Q2M389 1173 aa14.46□□□□□ -0.09
EXOSC1-208ENST00000476234 SAMD7Q7Z3H4 446 aa14.46□□□□□ -0.09
EXOSC1-208ENST00000476234 DDX60Q8IY21 1712 aaKnown RBP14.46□□□□□ -0.1
EXOSC1-208ENST00000476234 TNRC18O15417 2968 aaPredicted RBP14.46□□□□□ -0.1
EXOSC1-208ENST00000476234 CHL1O00533 1208 aa14.45□□□□□ -0.1
EXOSC1-208ENST00000476234 WDR43Q15061 677 aaKnown RBP eCLIP14.45□□□□□ -0.1
EXOSC1-208ENST00000476234 KRT26Q7Z3Y9 468 aa14.45□□□□□ -0.1
EXOSC1-208ENST00000476234 CCDC102AQ96A19 550 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms