RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, humanhuman

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-223ENST00000475732 C9orf78Q9NZ63 289 aaPredicted RBP12.66□□□□□ -0.38
DMD-223ENST00000475732 TNRC6CQ9HCJ0 1690 aaKnown RBP12.66□□□□□ -0.38
DMD-223ENST00000475732 BRCA1P38398 1863 aaKnown RBP12.65□□□□□ -0.38
DMD-223ENST00000475732 COL11A2P13942 1736 aaPredicted RBP12.65□□□□□ -0.38
DMD-223ENST00000475732 CDHR2Q9BYE9 1310 aa12.65□□□□□ -0.38
DMD-223ENST00000475732 KLRG2A4D1S0 409 aaPredicted RBP12.65□□□□□ -0.38
DMD-223ENST00000475732 H7C1W4 665 aa12.65□□□□□ -0.38
DMD-223ENST00000475732 IRS4O14654 1257 aaPredicted RBP12.65□□□□□ -0.38
DMD-223ENST00000475732 HCLS1P14317 486 aaPredicted RBP12.65□□□□□ -0.38
DMD-223ENST00000475732 DPEP1P16444 411 aa12.65□□□□□ -0.38
DMD-223ENST00000475732 UBE3BQ7Z3V4 1068 aa12.65□□□□□ -0.38
DMD-223ENST00000475732 FTSJ3Q8IY81 847 aaKnown RBP12.65□□□□□ -0.38
DMD-223ENST00000475732 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.65□□□□□ -0.38
DMD-223ENST00000475732 CLUAP1Q96AJ1 413 aa12.65□□□□□ -0.38
DMD-223ENST00000475732 CACNA1SQ13698 1873 aa12.64□□□□□ -0.39
DMD-223ENST00000475732 GRM8O00222 908 aa12.64□□□□□ -0.39
DMD-223ENST00000475732 MS4A1P11836 297 aa12.64□□□□□ -0.39
DMD-223ENST00000475732 CHRNA5P30532 468 aa12.64□□□□□ -0.39
DMD-223ENST00000475732 CRY2Q49AN0 593 aa12.64□□□□□ -0.39
DMD-223ENST00000475732 INTS3Q68E01 1043 aaKnown RBP12.64□□□□□ -0.39
DMD-223ENST00000475732 DZIP1LQ8IYY4 767 aaKnown RBP12.64□□□□□ -0.39
DMD-223ENST00000475732 JARID2Q92833 1246 aaPredicted RBP12.64□□□□□ -0.39
DMD-223ENST00000475732 TNNQ9UQP3 1299 aa12.64□□□□□ -0.39
DMD-223ENST00000475732 PDE8AO60658 829 aa12.63□□□□□ -0.39
DMD-223ENST00000475732 SRGNP10124 158 aa12.63□□□□□ -0.39
DMD-223ENST00000475732 NPR1P16066 1061 aa12.63□□□□□ -0.39
DMD-223ENST00000475732 KCNA3P22001 575 aa12.63□□□□□ -0.39
DMD-223ENST00000475732 RPGRQ92834 1020 aaKnown RBP12.63□□□□□ -0.39
DMD-223ENST00000475732 ZNF622Q969S3 477 aaKnown RBP eCLIP12.63□□□□□ -0.39
DMD-223ENST00000475732 MASTLQ96GX5 879 aa12.63□□□□□ -0.39
DMD-223ENST00000475732 PIM2Q9P1W9 311 aa12.63□□□□□ -0.39
DMD-223ENST00000475732 PLIN1O60240 522 aa12.62□□□□□ -0.39
DMD-223ENST00000475732 CASP7P55210 303 aa12.62□□□□□ -0.39
DMD-223ENST00000475732 SF3B3Q15393 1217 aaKnown RBP12.62□□□□□ -0.39
DMD-223ENST00000475732 STYK1Q6J9G0 422 aa12.62□□□□□ -0.39
DMD-223ENST00000475732 C3orf67Q6ZVT6 689 aa12.62□□□□□ -0.39
DMD-223ENST00000475732 PLA2G12BQ9BX93 195 aa12.62□□□□□ -0.39
DMD-223ENST00000475732 USP44Q9H0E7 712 aa12.62□□□□□ -0.39
DMD-223ENST00000475732 UTYO14607 1347 aa12.62□□□□□ -0.39
DMD-223ENST00000475732 ARFGEF1Q9Y6D6 1849 aa12.61□□□□□ -0.39
DMD-223ENST00000475732 NBPF7P0C2Y1 421 aaPredicted RBP12.61□□□□□ -0.39
DMD-223ENST00000475732 ALDH1B1P30837 517 aa12.61□□□□□ -0.39
DMD-223ENST00000475732 TMEM57Q8N5G2 664 aa12.61□□□□□ -0.39
DMD-223ENST00000475732 TTLL6Q8N841 843 aa12.61□□□□□ -0.39
DMD-223ENST00000475732 CNKSR1Q969H4 720 aa12.61□□□□□ -0.39
DMD-223ENST00000475732 RBM17Q96I25 401 aaKnown RBP12.61□□□□□ -0.39
DMD-223ENST00000475732 TAF1P21675 1872 aa12.6□□□□□ -0.39
DMD-223ENST00000475732 RLBP1P12271 317 aa12.6□□□□□ -0.39
DMD-223ENST00000475732 HOXA10P31260 410 aaPredicted RBP12.6□□□□□ -0.39
DMD-223ENST00000475732 CTSWP56202 376 aa12.6□□□□□ -0.39
DMD-223ENST00000475732 CCDC152Q4G0S7 254 aa12.6□□□□□ -0.39
DMD-223ENST00000475732 DALRD3Q5D0E6 543 aaKnown RBP12.6□□□□□ -0.39
DMD-223ENST00000475732 DDX46Q7L014 1031 aaKnown RBP12.6□□□□□ -0.39
DMD-223ENST00000475732 ZNF579Q8NAF0 562 aaKnown RBP12.6□□□□□ -0.39
DMD-223ENST00000475732 WWC3Q9ULE0 1092 aa12.6□□□□□ -0.39
DMD-223ENST00000475732 HDAC5Q9UQL6 1122 aa12.6□□□□□ -0.39
DMD-223ENST00000475732 SLX4Q8IY92 1834 aa12.6□□□□□ -0.39
DMD-223ENST00000475732 GNAI3P08754 354 aa12.59□□□□□ -0.39
DMD-223ENST00000475732 UBTFL1P0CB47 393 aaPredicted RBP12.59□□□□□ -0.39
DMD-223ENST00000475732 RRP1P56182 461 aaKnown RBP12.59□□□□□ -0.39
DMD-223ENST00000475732 PDE3AQ14432 1141 aa12.59□□□□□ -0.39
DMD-223ENST00000475732 GPR162Q16538 588 aa12.59□□□□□ -0.39
DMD-223ENST00000475732 ITPRIPQ8IWB1 547 aa12.59□□□□□ -0.39
DMD-223ENST00000475732 PELP1Q8IZL8 1130 aaKnown RBP12.59□□□□□ -0.39
DMD-223ENST00000475732 TTLL11Q8NHH1 800 aa12.59□□□□□ -0.39
DMD-223ENST00000475732 PANK1Q8TE04 598 aa12.59□□□□□ -0.39
DMD-223ENST00000475732 CRAMP1Q96RY5 1269 aa12.59□□□□□ -0.39
DMD-223ENST00000475732 BCS1LQ9Y276 419 aa12.59□□□□□ -0.39
DMD-223ENST00000475732 CSF1RP07333 972 aa12.58□□□□□ -0.4
DMD-223ENST00000475732 FOXO4P98177 505 aa12.58□□□□□ -0.4
DMD-223ENST00000475732 PRPF40BQ6NWY9 871 aaKnown RBP12.58□□□□□ -0.4
DMD-223ENST00000475732 SUCLG2Q96I99 432 aa12.58□□□□□ -0.4
DMD-223ENST00000475732 MEIS3Q99687 375 aa12.58□□□□□ -0.4
DMD-223ENST00000475732 GRAPQ13588 217 aa12.57□□□□□ -0.4
DMD-223ENST00000475732 MVPQ14764 893 aaKnown RBP12.57□□□□□ -0.4
DMD-223ENST00000475732 LMBR1LQ6UX01 489 aa12.57□□□□□ -0.4
DMD-223ENST00000475732 GRAPLQ8TC17 118 aaPredicted RBP12.57□□□□□ -0.4
DMD-223ENST00000475732 KAZALD1Q96I82 304 aa12.57□□□□□ -0.4
DMD-223ENST00000475732 CCDC85AQ96PX6 553 aaPredicted RBP12.57□□□□□ -0.4
DMD-223ENST00000475732 RTL9Q8NET4 1388 aa12.56□□□□□ -0.4
DMD-223ENST00000475732 BBOX1O75936 387 aa12.56□□□□□ -0.4
DMD-223ENST00000475732 YBX3P16989 372 aaKnown RBP eCLIP12.56□□□□□ -0.4
DMD-223ENST00000475732 EPHA10Q5JZY3 1008 aa12.56□□□□□ -0.4
DMD-223ENST00000475732 C20orf194Q5TEA3 1177 aa12.56□□□□□ -0.4
DMD-223ENST00000475732 LHX8Q68G74 356 aa12.56□□□□□ -0.4
DMD-223ENST00000475732 BICC1Q9H694 974 aaKnown RBP12.56□□□□□ -0.4
DMD-223ENST00000475732 GREM2Q9H772 168 aa12.56□□□□□ -0.4
DMD-223ENST00000475732 SEC31BQ9NQW1 1179 aa12.56□□□□□ -0.4
DMD-223ENST00000475732 DDX19BQ9UMR2 479 aa12.56□□□□□ -0.4
DMD-223ENST00000475732 COG6Q9Y2V7 657 aa12.56□□□□□ -0.4
DMD-223ENST00000475732 CHMP3Q9Y3E7 222 aa12.56□□□□□ -0.4
DMD-223ENST00000475732 SPEF2Q9C093 1822 aa12.55□□□□□ -0.4
DMD-223ENST00000475732 PPEF1O14829 653 aaPredicted RBP12.55□□□□□ -0.4
DMD-223ENST00000475732 ZBTB7BO15156 539 aaPredicted RBP12.55□□□□□ -0.4
DMD-223ENST00000475732 C21orf2O43822 256 aa12.55□□□□□ -0.4
DMD-223ENST00000475732 GRIN3BO60391 1043 aa12.55□□□□□ -0.4
DMD-223ENST00000475732 ITGA6P23229 1130 aa12.55□□□□□ -0.4
DMD-223ENST00000475732 RPS8P62241 208 aaKnown RBP12.55□□□□□ -0.4
DMD-223ENST00000475732 IFIT5Q13325 482 aaKnown RBP12.55□□□□□ -0.4
DMD-223ENST00000475732 FAM161AQ3B820 660 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms