RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 INTS3Q68E01 1043 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-212ENST00000475684 POLR3GLQ9BT43 218 aa13.58□□□□□ -0.24
CCHCR1-212ENST00000475684 RBM26Q5T8P6 1007 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-212ENST00000475684 IL17REQ8NFR9 667 aa13.57□□□□□ -0.24
CCHCR1-212ENST00000475684 ZBTB12Q9Y330 459 aaPredicted RBP13.57□□□□□ -0.24
CCHCR1-212ENST00000475684 ATP6V0A2Q9Y487 856 aa13.57□□□□□ -0.24
CCHCR1-212ENST00000475684 PRAMEF22A3QJZ6 481 aa13.56□□□□□ -0.24
CCHCR1-212ENST00000475684 KCNQ3O43525 872 aa13.56□□□□□ -0.24
CCHCR1-212ENST00000475684 FKTNO75072 461 aa13.56□□□□□ -0.24
CCHCR1-212ENST00000475684 NOM1Q5C9Z4 860 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-212ENST00000475684 DPP8Q6V1X1 898 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-212ENST00000475684 RTFDC1Q9BY42 306 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-212ENST00000475684 BTBD11A6QL63 1104 aa13.55□□□□□ -0.24
CCHCR1-212ENST00000475684 EGFRP00533 1210 aa13.55□□□□□ -0.24
CCHCR1-212ENST00000475684 KIAA2012Q0VF49 1180 aa13.55□□□□□ -0.24
CCHCR1-212ENST00000475684 SULF1Q8IWU6 871 aa13.55□□□□□ -0.24
CCHCR1-212ENST00000475684 DPF2Q92785 391 aa13.55□□□□□ -0.24
CCHCR1-212ENST00000475684 RIC1Q4ADV7 1423 aa13.55□□□□□ -0.24
CCHCR1-212ENST00000475684 GNAT3A8MTJ3 354 aa13.54□□□□□ -0.24
CCHCR1-212ENST00000475684 NBPF26B4DH59 902 aa13.54□□□□□ -0.24
CCHCR1-212ENST00000475684 EN2P19622 333 aaPredicted RBP13.54□□□□□ -0.24
CCHCR1-212ENST00000475684 NBPF10Q6P3W6 841 aaKnown RBP13.54□□□□□ -0.24
CCHCR1-212ENST00000475684 CDCA5Q96FF9 252 aa13.54□□□□□ -0.24
CCHCR1-212ENST00000475684 YDJCA8MPS7 323 aa13.53□□□□□ -0.24
CCHCR1-212ENST00000475684 MPNDQ8N594 471 aa13.53□□□□□ -0.24
CCHCR1-212ENST00000475684 A0A0C4DFX4 3053 aa13.53□□□□□ -0.24
CCHCR1-212ENST00000475684 SNRPA1P09661 255 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-212ENST00000475684 TM4SF4P48230 202 aa13.52□□□□□ -0.25
CCHCR1-212ENST00000475684 SIPA1L3O60292 1781 aaPredicted RBP13.51□□□□□ -0.25
CCHCR1-212ENST00000475684 PAPPA2Q9BXP8 1791 aa13.51□□□□□ -0.25
CCHCR1-212ENST00000475684 H0YGN5 161 aa13.51□□□□□ -0.25
CCHCR1-212ENST00000475684 PSMD14O00487 310 aa13.51□□□□□ -0.25
CCHCR1-212ENST00000475684 FKBP1BP68106 108 aa13.51□□□□□ -0.25
CCHCR1-212ENST00000475684 C3orf67Q6ZVT6 689 aa13.51□□□□□ -0.25
CCHCR1-212ENST00000475684 OTUD5Q96G74 571 aa13.51□□□□□ -0.25
CCHCR1-212ENST00000475684 PANK3Q9H999 370 aa13.51□□□□□ -0.25
CCHCR1-212ENST00000475684 GGA3Q9NZ52 723 aa13.51□□□□□ -0.25
CCHCR1-212ENST00000475684 TRIM17Q9Y577 477 aa13.51□□□□□ -0.25
CCHCR1-212ENST00000475684 HTTP42858 3142 aa13.5□□□□□ -0.25
CCHCR1-212ENST00000475684 GPTP24298 496 aa13.5□□□□□ -0.25
CCHCR1-212ENST00000475684 SUSD4Q5VX71 490 aa13.5□□□□□ -0.25
CCHCR1-212ENST00000475684 SP8Q8IXZ3 490 aa13.5□□□□□ -0.25
CCHCR1-212ENST00000475684 NGEFQ8N5V2 710 aa13.5□□□□□ -0.25
CCHCR1-212ENST00000475684 NLRP3Q96P20 1036 aa13.5□□□□□ -0.25
CCHCR1-212ENST00000475684 R3HDMLQ9H3Y0 253 aa13.5□□□□□ -0.25
CCHCR1-212ENST00000475684 CENPFP49454 3210 aa13.49□□□□□ -0.25
CCHCR1-212ENST00000475684 ABCC4O15439 1325 aa13.49□□□□□ -0.25
CCHCR1-212ENST00000475684 BBOX1O75936 387 aa13.49□□□□□ -0.25
CCHCR1-212ENST00000475684 RPS12P25398 132 aaKnown RBP13.49□□□□□ -0.25
CCHCR1-212ENST00000475684 MKRN3Q13064 507 aaKnown RBP13.49□□□□□ -0.25
CCHCR1-212ENST00000475684 KIF4BQ2VIQ3 1234 aa13.49□□□□□ -0.25
CCHCR1-212ENST00000475684 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
CCHCR1-212ENST00000475684 MOB2Q70IA6 237 aa13.49□□□□□ -0.25
CCHCR1-212ENST00000475684 GAS2L2Q8NHY3 880 aa13.49□□□□□ -0.25
CCHCR1-212ENST00000475684 ASTN2O75129 1339 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-212ENST00000475684 ERVV-1B6SEH8 477 aa13.48□□□□□ -0.25
CCHCR1-212ENST00000475684 UBE2Q2LH0YL09 131 aa13.48□□□□□ -0.25
CCHCR1-212ENST00000475684 MNX1P50219 401 aaPredicted RBP13.48□□□□□ -0.25
CCHCR1-212ENST00000475684 SREBF2Q12772 1141 aa13.48□□□□□ -0.25
CCHCR1-212ENST00000475684 OTOP1Q7RTM1 612 aa13.48□□□□□ -0.25
CCHCR1-212ENST00000475684 CFHR5Q9BXR6 569 aa13.48□□□□□ -0.25
CCHCR1-212ENST00000475684 COL6A3P12111 3177 aa13.48□□□□□ -0.25
CCHCR1-212ENST00000475684 POLR2AP24928 1970 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-212ENST00000475684 UBN2Q6ZU65 1347 aa13.47□□□□□ -0.25
CCHCR1-212ENST00000475684 ANGEL2Q5VTE6 544 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-212ENST00000475684 TMEM106CQ9BVX2 250 aa13.47□□□□□ -0.25
CCHCR1-212ENST00000475684 RBBP6Q7Z6E9 1792 aaKnown RBP13.47□□□□□ -0.25
CCHCR1-212ENST00000475684 BRCA2P51587 3418 aa13.46□□□□□ -0.25
CCHCR1-212ENST00000475684 IBTKQ9P2D0 1353 aaPredicted RBP13.46□□□□□ -0.25
CCHCR1-212ENST00000475684 DIAPH1O60610 1272 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-212ENST00000475684 NTSR2O95665 410 aa13.46□□□□□ -0.25
CCHCR1-212ENST00000475684 ATXN8OSP0DMR3 200 aa13.46□□□□□ -0.25
CCHCR1-212ENST00000475684 KIF6Q6ZMV9 814 aa13.46□□□□□ -0.25
CCHCR1-212ENST00000475684 DBNDD1Q9H9R9 158 aa13.46□□□□□ -0.25
CCHCR1-212ENST00000475684 RBM27Q9P2N5 1060 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-212ENST00000475684 PTPN22Q9Y2R2 807 aa13.46□□□□□ -0.25
CCHCR1-212ENST00000475684 CEMIPQ8WUJ3 1361 aa13.45□□□□□ -0.26
CCHCR1-212ENST00000475684 MAP3K15Q6ZN16 1313 aa13.45□□□□□ -0.26
CCHCR1-212ENST00000475684 TTLL12Q14166 644 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-212ENST00000475684 WASHC4Q2M389 1173 aa13.45□□□□□ -0.26
CCHCR1-212ENST00000475684 PPP1R42Q7Z4L9 355 aa13.45□□□□□ -0.26
CCHCR1-212ENST00000475684 ARMC5Q96C12 935 aa13.45□□□□□ -0.26
CCHCR1-212ENST00000475684 KCNQ5Q9NR82 932 aa13.45□□□□□ -0.26
CCHCR1-212ENST00000475684 RIMBP2O15034 1052 aa13.44□□□□□ -0.26
CCHCR1-212ENST00000475684 ALDH1A1P00352 501 aa13.44□□□□□ -0.26
CCHCR1-212ENST00000475684 SCARF1Q14162 830 aa13.44□□□□□ -0.26
CCHCR1-212ENST00000475684 ZNF34Q8IZ26 560 aa13.44□□□□□ -0.26
CCHCR1-212ENST00000475684 ZBTB3Q9H5J0 574 aa13.44□□□□□ -0.26
CCHCR1-212ENST00000475684 SLC10A5Q5PT55 438 aa13.43□□□□□ -0.26
CCHCR1-212ENST00000475684 TTLL7Q6ZT98 887 aa13.43□□□□□ -0.26
CCHCR1-212ENST00000475684 NUP98P52948 1817 aa13.42□□□□□ -0.26
CCHCR1-212ENST00000475684 ECE2O60344 883 aa13.42□□□□□ -0.26
CCHCR1-212ENST00000475684 DSG3P32926 999 aa13.42□□□□□ -0.26
CCHCR1-212ENST00000475684 DOK7Q18PE1 504 aa13.42□□□□□ -0.26
CCHCR1-212ENST00000475684 DDX46Q7L014 1031 aaKnown RBP13.42□□□□□ -0.26
CCHCR1-212ENST00000475684 ERO1AQ96HE7 468 aa13.42□□□□□ -0.26
CCHCR1-212ENST00000475684 SCAF8Q9UPN6 1271 aaKnown RBP13.42□□□□□ -0.26
CCHCR1-212ENST00000475684 C6orf229H3BNL8 230 aa13.41□□□□□ -0.26
CCHCR1-212ENST00000475684 U2SURPO15042 1029 aaKnown RBP13.41□□□□□ -0.26
CCHCR1-212ENST00000475684 TCIRG1Q13488 830 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms