RNA–Protein interactions for RNA: ENST00000475553.1

USP37-208, Transcript of ubiquitin specific peptidase 37, human

TSL 4

Gene USP37, Length 613 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP37-208	ENST00000475553	NFKB1	P19838	968 aa		9.42	□□□□□ -0.9
USP37-208	ENST00000475553	CTBS	Q01459	385 aa		9.42	□□□□□ -0.9
USP37-208	ENST00000475553	COL19A1	Q14993	1142 aa		9.42	□□□□□ -0.9
USP37-208	ENST00000475553	ZNF326	Q5BKZ1	582 aa	Known RBP	9.42	□□□□□ -0.9
USP37-208	ENST00000475553	SNX29	Q8TEQ0	813 aa		9.42	□□□□□ -0.9
USP37-208	ENST00000475553	ALKBH8	Q96BT7	664 aa	Known RBP	9.42	□□□□□ -0.9
USP37-208	ENST00000475553	ABI2	Q9NYB9	513 aa	Predicted RBP	9.42	□□□□□ -0.9
USP37-208	ENST00000475553	TNFRSF21	O75509	655 aa		9.41	□□□□□ -0.9
USP37-208	ENST00000475553	TARS	P26639	723 aa	Known RBP	9.41	□□□□□ -0.9
USP37-208	ENST00000475553	GRN	P28799	593 aa	Known RBP	9.41	□□□□□ -0.9
USP37-208	ENST00000475553	NPAS4	Q8IUM7	802 aa		9.41	□□□□□ -0.9
USP37-208	ENST00000475553	IRF7	Q92985	503 aa		9.41	□□□□□ -0.9
USP37-208	ENST00000475553	PMEPA1	Q969W9	287 aa		9.41	□□□□□ -0.9
USP37-208	ENST00000475553	AMOTL2	Q9Y2J4	779 aa		9.41	□□□□□ -0.9
USP37-208	ENST00000475553	PHF20L1	A8MW92	1017 aa		9.4	□□□□□ -0.9
USP37-208	ENST00000475553	PSAP	P07602	524 aa		9.4	□□□□□ -0.9
USP37-208	ENST00000475553	RAB44	Q7Z6P3	723 aa	Predicted RBP	9.4	□□□□□ -0.9
USP37-208	ENST00000475553	SLC30A3	Q99726	388 aa		9.4	□□□□□ -0.9
USP37-208	ENST00000475553	IGFLR1	Q9H665	355 aa		9.4	□□□□□ -0.9
USP37-208	ENST00000475553	TMEM63C	Q9P1W3	806 aa		9.4	□□□□□ -0.9
USP37-208	ENST00000475553	CPNE3	O75131	537 aa	Known RBP	9.39	□□□□□ -0.91
USP37-208	ENST00000475553	CES1	P23141	567 aa		9.39	□□□□□ -0.91
USP37-208	ENST00000475553	TBC1D8B	Q0IIM8	1120 aa		9.39	□□□□□ -0.91
USP37-208	ENST00000475553	DSC3	Q14574	896 aa		9.39	□□□□□ -0.91
USP37-208	ENST00000475553	GRIN2C	Q14957	1233 aa		9.39	□□□□□ -0.91
USP37-208	ENST00000475553	GIPC2	Q8TF65	315 aa		9.39	□□□□□ -0.91
USP37-208	ENST00000475553	MBIP	Q9NS73	344 aa		9.39	□□□□□ -0.91
USP37-208	ENST00000475553	PNMA6F	A0A0J9YX94	578 aa		9.38	□□□□□ -0.91
USP37-208	ENST00000475553	P4HB	P07237	508 aa	Known RBP	9.38	□□□□□ -0.91
USP37-208	ENST00000475553	MAP2K3	P46734	347 aa		9.38	□□□□□ -0.91
USP37-208	ENST00000475553	FMR1	Q06787	632 aa	Known RBP eCLIP	9.38	□□□□□ -0.91
USP37-208	ENST00000475553	ORC1	Q13415	861 aa		9.38	□□□□□ -0.91
USP37-208	ENST00000475553	CSRNP1	Q96S65	589 aa		9.38	□□□□□ -0.91
USP37-208	ENST00000475553	COL25A1	Q9BXS0	654 aa	Predicted RBP	9.38	□□□□□ -0.91
USP37-208	ENST00000475553	DNAJC25	Q9H1X3	360 aa		9.38	□□□□□ -0.91
USP37-208	ENST00000475553	FOXD3	Q9UJU5	478 aa	Predicted RBP	9.38	□□□□□ -0.91
USP37-208	ENST00000475553	EIF1AY	O14602	144 aa	Known RBP	9.37	□□□□□ -0.91
USP37-208	ENST00000475553	MAP3K6	O95382	1288 aa		9.37	□□□□□ -0.91
USP37-208	ENST00000475553	LDHB	P07195	334 aa	Known RBP	9.37	□□□□□ -0.91
USP37-208	ENST00000475553	SYT9	Q86SS6	491 aa		9.37	□□□□□ -0.91
USP37-208	ENST00000475553	GPR161	Q8N6U8	529 aa	Known RBP	9.37	□□□□□ -0.91
USP37-208	ENST00000475553	MMP20	O60882	483 aa		9.36	□□□□□ -0.91
USP37-208	ENST00000475553	IGHA2	P01877	340 aa		9.36	□□□□□ -0.91
USP37-208	ENST00000475553	VSIG8	P0DPA2	414 aa		9.36	□□□□□ -0.91
USP37-208	ENST00000475553	PLAUR	Q03405	335 aa		9.36	□□□□□ -0.91
USP37-208	ENST00000475553	PCSK7	Q16549	785 aa		9.36	□□□□□ -0.91
USP37-208	ENST00000475553	ZNF468	Q5VIY5	522 aa	Predicted RBP	9.36	□□□□□ -0.91
USP37-208	ENST00000475553	ALG1L	Q6GMV1	187 aa		9.36	□□□□□ -0.91
USP37-208	ENST00000475553	DHX32	Q7L7V1	743 aa	Known RBP	9.36	□□□□□ -0.91
USP37-208	ENST00000475553	C1orf127	Q8N9H9	656 aa		9.36	□□□□□ -0.91
USP37-208	ENST00000475553	UBE2O	Q9C0C9	1292 aa	Known RBP	9.36	□□□□□ -0.91
USP37-208	ENST00000475553	ZFYVE28	Q9HCC9	887 aa		9.36	□□□□□ -0.91
USP37-208	ENST00000475553	TLR7	Q9NYK1	1049 aa	Known RBP	9.36	□□□□□ -0.91
USP37-208	ENST00000475553	ADH6	P28332	368 aa		9.35	□□□□□ -0.91
USP37-208	ENST00000475553	ITGAE	P38570	1179 aa		9.35	□□□□□ -0.91
USP37-208	ENST00000475553	PCBP4	P57723	403 aa	Known RBP	9.35	□□□□□ -0.91
USP37-208	ENST00000475553	XPC	Q01831	940 aa	Predicted RBP	9.35	□□□□□ -0.91
USP37-208	ENST00000475553	ENOX2	Q16206	610 aa	Known RBP	9.35	□□□□□ -0.91
USP37-208	ENST00000475553	SPACA7	Q96KW9	195 aa		9.35	□□□□□ -0.91
USP37-208	ENST00000475553	AVEN	Q9NQS1	362 aa	Predicted RBP	9.35	□□□□□ -0.91
USP37-208	ENST00000475553	ZFAT	Q9P243	1243 aa		9.35	□□□□□ -0.91
USP37-208	ENST00000475553	HCN2	Q9UL51	889 aa		9.35	□□□□□ -0.91
USP37-208	ENST00000475553	C2CD2L	O14523	706 aa		9.34	□□□□□ -0.91
USP37-208	ENST00000475553	RBM25	P49756	843 aa	Known RBP	9.34	□□□□□ -0.91
USP37-208	ENST00000475553	HYAL2	Q12891	473 aa		9.34	□□□□□ -0.91
USP37-208	ENST00000475553	NFX1	Q12986	1120 aa	Known RBP	9.34	□□□□□ -0.91
USP37-208	ENST00000475553	GAS6	Q14393	721 aa		9.34	□□□□□ -0.91
USP37-208	ENST00000475553	TREML4	Q6UXN2	200 aa		9.34	□□□□□ -0.91
USP37-208	ENST00000475553	NCAPG2	Q86XI2	1143 aa		9.34	□□□□□ -0.91
USP37-208	ENST00000475553	OR13H1	Q8NG92	308 aa		9.34	□□□□□ -0.91
USP37-208	ENST00000475553	RBSN	Q9H1K0	784 aa		9.34	□□□□□ -0.91
USP37-208	ENST00000475553	NLRP2	Q9NX02	1062 aa		9.34	□□□□□ -0.91
USP37-208	ENST00000475553	CNTN3	Q9P232	1028 aa		9.34	□□□□□ -0.91
USP37-208	ENST00000475553	RBM47	A0AV96	593 aa	Known RBP	9.33	□□□□□ -0.92
USP37-208	ENST00000475553	SIN3B	O75182	1162 aa		9.33	□□□□□ -0.92
USP37-208	ENST00000475553	PRPF40A	O75400	957 aa	Known RBP	9.33	□□□□□ -0.92
USP37-208	ENST00000475553	ARAF	P10398	606 aa		9.33	□□□□□ -0.92
USP37-208	ENST00000475553	IGF1R	P08069	1367 aa		9.33	□□□□□ -0.92
USP37-208	ENST00000475553	ERBB4	Q15303	1308 aa		9.32	□□□□□ -0.92
USP37-208	ENST00000475553	EREG	O14944	169 aa		9.32	□□□□□ -0.92
USP37-208	ENST00000475553	EDN3	P14138	238 aa		9.32	□□□□□ -0.92
USP37-208	ENST00000475553	SOX18	P35713	384 aa		9.32	□□□□□ -0.92
USP37-208	ENST00000475553	LCE2A	Q5TA79	106 aa	Predicted RBP	9.32	□□□□□ -0.92
USP37-208	ENST00000475553	FBF1	Q8TES7	1133 aa		9.32	□□□□□ -0.92
USP37-208	ENST00000475553	CCDC74A	Q96AQ1	378 aa		9.32	□□□□□ -0.92
USP37-208	ENST00000475553	CNTNAP3B	Q96NU0	1288 aa		9.32	□□□□□ -0.92
USP37-208	ENST00000475553	CNTNAP3	Q9BZ76	1288 aa		9.32	□□□□□ -0.92
USP37-208	ENST00000475553	KANSL3	Q9P2N6	904 aa		9.32	□□□□□ -0.92
USP37-208	ENST00000475553	NEURL1B	A8MQ27	555 aa		9.31	□□□□□ -0.92
USP37-208	ENST00000475553	CYP2E1	P05181	493 aa	Predicted RBP	9.31	□□□□□ -0.92
USP37-208	ENST00000475553	POLR3D	P05423	398 aa	Predicted RBP	9.31	□□□□□ -0.92
USP37-208	ENST00000475553	ZNF16	P17020	682 aa	Predicted RBP	9.31	□□□□□ -0.92
USP37-208	ENST00000475553	ALAS2	P22557	587 aa		9.31	□□□□□ -0.92
USP37-208	ENST00000475553	NRL	P54845	237 aa		9.31	□□□□□ -0.92
USP37-208	ENST00000475553	FBXO33	Q7Z6M2	555 aa		9.31	□□□□□ -0.92
USP37-208	ENST00000475553	NSUN5	Q96P11	429 aa	Known RBP	9.31	□□□□□ -0.92
USP37-208	ENST00000475553	MRS2	Q9HD23	443 aa		9.31	□□□□□ -0.92
USP37-208	ENST00000475553	STK17A	Q9UEE5	414 aa		9.31	□□□□□ -0.92
USP37-208	ENST00000475553	GDF2	Q9UK05	429 aa	Predicted RBP	9.31	□□□□□ -0.92
USP37-208	ENST00000475553	WWC3	Q9ULE0	1092 aa		9.31	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms