RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 UPP2O95045 317 aa8.46□□□□□ -1.06
SDHB-205ENST00000475506 TAF1CQ15572 869 aaPredicted RBP8.46□□□□□ -1.06
SDHB-205ENST00000475506 MRPL14Q6P1L8 145 aaKnown RBP8.46□□□□□ -1.06
SDHB-205ENST00000475506 GALNT12Q8IXK2 581 aa8.46□□□□□ -1.06
SDHB-205ENST00000475506 CEP63Q96MT8 703 aa8.46□□□□□ -1.06
SDHB-205ENST00000475506 DNAJC2Q99543 621 aaKnown RBP8.46□□□□□ -1.06
SDHB-205ENST00000475506 ZCCHC2Q9C0B9 1178 aaKnown RBP8.46□□□□□ -1.06
SDHB-205ENST00000475506 NEUROD4Q9HD90 331 aa8.46□□□□□ -1.06
SDHB-205ENST00000475506 FAM8A1Q9UBU6 413 aa8.46□□□□□ -1.06
SDHB-205ENST00000475506 GGT7Q9UJ14 662 aa8.46□□□□□ -1.06
SDHB-205ENST00000475506 FIGNL2A6NMB9 653 aa8.45□□□□□ -1.06
SDHB-205ENST00000475506 DPH6Q7L8W6 267 aa8.45□□□□□ -1.06
SDHB-205ENST00000475506 HS2ST1Q7LGA3 356 aa8.45□□□□□ -1.06
SDHB-205ENST00000475506 ZNF654Q8IZM8 581 aa8.45□□□□□ -1.06
SDHB-205ENST00000475506 RUBCNLQ9H714 662 aa8.45□□□□□ -1.06
SDHB-205ENST00000475506 GPAMQ9HCL2 828 aa8.45□□□□□ -1.06
SDHB-205ENST00000475506 COPRSQ9NQ92 184 aa8.45□□□□□ -1.06
SDHB-205ENST00000475506 TTLL8A6PVC2 850 aa8.44□□□□□ -1.06
SDHB-205ENST00000475506 SMARCA5O60264 1052 aaPredicted RBP8.44□□□□□ -1.06
SDHB-205ENST00000475506 EGFRP00533 1210 aa8.44□□□□□ -1.06
SDHB-205ENST00000475506 CYP2E1P05181 493 aaPredicted RBP8.44□□□□□ -1.06
SDHB-205ENST00000475506 DNAJA1P31689 397 aaKnown RBP8.44□□□□□ -1.06
SDHB-205ENST00000475506 GRM2Q14416 872 aa8.44□□□□□ -1.06
SDHB-205ENST00000475506 ERMP1Q7Z2K6 904 aa8.44□□□□□ -1.06
SDHB-205ENST00000475506 CRISPLD1Q9H336 500 aa8.44□□□□□ -1.06
SDHB-205ENST00000475506 ABI2Q9NYB9 513 aaPredicted RBP8.44□□□□□ -1.06
SDHB-205ENST00000475506 INPP5FQ9Y2H2 1132 aa8.44□□□□□ -1.06
SDHB-205ENST00000475506 BMP1P13497 986 aa8.43□□□□□ -1.06
SDHB-205ENST00000475506 VEGFBP49765 207 aa8.43□□□□□ -1.06
SDHB-205ENST00000475506 ST13P50502 369 aaKnown RBP8.43□□□□□ -1.06
SDHB-205ENST00000475506 NLRP13Q86W25 1043 aa8.43□□□□□ -1.06
SDHB-205ENST00000475506 GLIS3Q8NEA6 775 aa8.43□□□□□ -1.06
SDHB-205ENST00000475506 SUV39H2Q9H5I1 410 aa8.43□□□□□ -1.06
SDHB-205ENST00000475506 LATS2Q9NRM7 1088 aa8.43□□□□□ -1.06
SDHB-205ENST00000475506 SOS2Q07890 1332 aaPredicted RBP8.43□□□□□ -1.06
SDHB-205ENST00000475506 POTECB2RU33 542 aa8.42□□□□□ -1.06
SDHB-205ENST00000475506 GADD45BO75293 160 aaPredicted RBP8.42□□□□□ -1.06
SDHB-205ENST00000475506 EPB42P16452 691 aa8.42□□□□□ -1.06
SDHB-205ENST00000475506 ATP2B1P20020 1258 aa8.42□□□□□ -1.06
SDHB-205ENST00000475506 GIMAP6Q6P9H5 292 aa8.42□□□□□ -1.06
SDHB-205ENST00000475506 TRIM46Q7Z4K8 759 aa8.42□□□□□ -1.06
SDHB-205ENST00000475506 C3orf58Q8NDZ4 430 aa8.42□□□□□ -1.06
SDHB-205ENST00000475506 PUS7Q96PZ0 661 aaKnown RBP8.42□□□□□ -1.06
SDHB-205ENST00000475506 LNPKQ9C0E8 428 aa8.42□□□□□ -1.06
SDHB-205ENST00000475506 BRD7Q9NPI1 651 aa8.42□□□□□ -1.06
SDHB-205ENST00000475506 THBS1P07996 1170 aa8.41□□□□□ -1.06
SDHB-205ENST00000475506 GTF2F1P35269 517 aaKnown RBP eCLIP8.41□□□□□ -1.06
SDHB-205ENST00000475506 GNL2Q13823 731 aaKnown RBP8.41□□□□□ -1.06
SDHB-205ENST00000475506 PEAR1Q5VY43 1037 aaPredicted RBP8.41□□□□□ -1.06
SDHB-205ENST00000475506 SPATA32Q96LK8 384 aa8.41□□□□□ -1.06
SDHB-205ENST00000475506 SRCIN1Q9C0H9 1055 aa8.41□□□□□ -1.06
SDHB-205ENST00000475506 A0A1W2PP55 124 aa8.4□□□□□ -1.06
SDHB-205ENST00000475506 SASH3O75995 380 aa8.4□□□□□ -1.06
SDHB-205ENST00000475506 CES1P23141 567 aa8.4□□□□□ -1.06
SDHB-205ENST00000475506 GJA8P48165 433 aa8.4□□□□□ -1.06
SDHB-205ENST00000475506 MAP3K10Q02779 954 aa8.4□□□□□ -1.06
SDHB-205ENST00000475506 ARID5AQ03989 594 aa8.4□□□□□ -1.06
SDHB-205ENST00000475506 SAMD5Q5TGI4 173 aa8.4□□□□□ -1.06
SDHB-205ENST00000475506 KIAA0319Q5VV43 1072 aa8.4□□□□□ -1.06
SDHB-205ENST00000475506 MCF2L2Q86YR7 1114 aa8.4□□□□□ -1.06
SDHB-205ENST00000475506 KANSL3Q9P2N6 904 aa8.4□□□□□ -1.06
SDHB-205ENST00000475506 HCN2Q9UL51 889 aa8.4□□□□□ -1.06
SDHB-205ENST00000475506 DYRK1BQ9Y463 629 aa8.4□□□□□ -1.06
SDHB-205ENST00000475506 GJA3Q9Y6H8 435 aa8.4□□□□□ -1.06
SDHB-205ENST00000475506 CADPSQ9ULU8 1353 aa8.39□□□□□ -1.07
SDHB-205ENST00000475506 F11P03951 625 aa8.39□□□□□ -1.07
SDHB-205ENST00000475506 TARSP26639 723 aaKnown RBP8.39□□□□□ -1.07
SDHB-205ENST00000475506 KCNQ4P56696 695 aa8.39□□□□□ -1.07
SDHB-205ENST00000475506 SFSWAPQ12872 951 aaKnown RBP8.39□□□□□ -1.07
SDHB-205ENST00000475506 PAK2Q13177 524 aa8.39□□□□□ -1.07
SDHB-205ENST00000475506 GRIN2CQ14957 1233 aa8.39□□□□□ -1.07
SDHB-205ENST00000475506 C11orf16Q9NQ32 467 aa8.39□□□□□ -1.07
SDHB-205ENST00000475506 KBTBD4Q9NVX7 518 aa8.39□□□□□ -1.07
SDHB-205ENST00000475506 DNMT3LQ9UJW3 386 aa8.39□□□□□ -1.07
SDHB-205ENST00000475506 SENP3-EIF4A1A0A087X0R7 540 aa8.38□□□□□ -1.07
SDHB-205ENST00000475506 MMP20O60882 483 aa8.38□□□□□ -1.07
SDHB-205ENST00000475506 FGRP09769 529 aa8.38□□□□□ -1.07
SDHB-205ENST00000475506 TTC39BQ5VTQ0 682 aaPredicted RBP8.38□□□□□ -1.07
SDHB-205ENST00000475506 NLRP8Q86W28 1048 aa8.38□□□□□ -1.07
SDHB-205ENST00000475506 ARMC5Q96C12 935 aa8.38□□□□□ -1.07
SDHB-205ENST00000475506 GAS2L1Q99501 681 aaPredicted RBP8.38□□□□□ -1.07
SDHB-205ENST00000475506 TRIM56Q9BRZ2 755 aaKnown RBP8.38□□□□□ -1.07
SDHB-205ENST00000475506 GSX2Q9BZM3 304 aa8.38□□□□□ -1.07
SDHB-205ENST00000475506 ZFATQ9P243 1243 aa8.38□□□□□ -1.07
SDHB-205ENST00000475506 SALL4Q9UJQ4 1053 aa8.38□□□□□ -1.07
SDHB-205ENST00000475506 EFSO43281 561 aa8.37□□□□□ -1.07
SDHB-205ENST00000475506 RBL2Q08999 1139 aa8.37□□□□□ -1.07
SDHB-205ENST00000475506 CTC1Q2NKJ3 1217 aa8.37□□□□□ -1.07
SDHB-205ENST00000475506 KRT25Q7Z3Z0 450 aa8.37□□□□□ -1.07
SDHB-205ENST00000475506 PMEPA1Q969W9 287 aa8.37□□□□□ -1.07
SDHB-205ENST00000475506 CUEDC1Q9NWM3 386 aaPredicted RBP8.37□□□□□ -1.07
SDHB-205ENST00000475506 KCNH4Q9UQ05 1017 aa8.37□□□□□ -1.07
SDHB-205ENST00000475506 F6X3S4 739 aa8.36□□□□□ -1.07
SDHB-205ENST00000475506 AVPP01185 164 aa8.36□□□□□ -1.07
SDHB-205ENST00000475506 ATF4P18848 351 aaPredicted RBP8.36□□□□□ -1.07
SDHB-205ENST00000475506 GSTT1P30711 240 aa8.36□□□□□ -1.07
SDHB-205ENST00000475506 UBAP2LQ14157 1087 aaKnown RBP8.36□□□□□ -1.07
SDHB-205ENST00000475506 SCARF1Q14162 830 aa8.36□□□□□ -1.07
SDHB-205ENST00000475506 OR13H1Q8NG92 308 aa8.36□□□□□ -1.07
SDHB-205ENST00000475506 ZFP42Q96MM3 310 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms