RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 ALDH1L1O75891 902 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 CNNM3Q8NE01 707 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 IP6K1Q92551 441 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 ANO10Q9NW15 660 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 CEP170Q5SW79 1584 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 ZMYM4Q5VZL5 1548 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 H0YHG0 523 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 C6orf229H3BNL8 230 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 HMGB1P09429 215 aaKnown RBP11.18□□□□□ -0.62
CDH23-211ENST00000475158 IQCA1Q86XH1 822 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 CTCFLQ8NI51 663 aaPredicted RBP11.18□□□□□ -0.62
CDH23-211ENST00000475158 SMARCE1Q969G3 411 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 DBNDD2Q9BQY9 259 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 EIF2AK4Q9P2K8 1649 aaKnown RBP11.18□□□□□ -0.62
CDH23-211ENST00000475158 POLR3GO15318 223 aaPredicted RBP11.18□□□□□ -0.62
CDH23-211ENST00000475158 SYT1P21579 422 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 METAP2P50579 478 aaKnown RBP eCLIP11.18□□□□□ -0.62
CDH23-211ENST00000475158 CREB3L3Q68CJ9 461 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 MIGA1Q8NAN2 632 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 STX8Q9UNK0 236 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 ZNF652Q9Y2D9 606 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 NPC1L1Q9UHC9 1359 aa11.18□□□□□ -0.62
CDH23-211ENST00000475158 ATP7AQ04656 1500 aa11.17□□□□□ -0.62
CDH23-211ENST00000475158 LRSAM1Q6UWE0 723 aa11.17□□□□□ -0.62
CDH23-211ENST00000475158 LEKR1Q6ZMV7 388 aa11.17□□□□□ -0.62
CDH23-211ENST00000475158 DNA2P51530 1060 aa11.17□□□□□ -0.62
CDH23-211ENST00000475158 PTPN14Q15678 1187 aa11.17□□□□□ -0.62
CDH23-211ENST00000475158 MCMDC2Q4G0Z9 681 aa11.17□□□□□ -0.62
CDH23-211ENST00000475158 RUFY1Q96T51 708 aa11.17□□□□□ -0.62
CDH23-211ENST00000475158 DNAJC25Q9H1X3 360 aa11.17□□□□□ -0.62
CDH23-211ENST00000475158 NPHP3Q7Z494 1330 aa11.17□□□□□ -0.62
CDH23-211ENST00000475158 F13A1P00488 732 aa11.17□□□□□ -0.62
CDH23-211ENST00000475158 PKP1Q13835 747 aa11.17□□□□□ -0.62
CDH23-211ENST00000475158 ZNF790Q6PG37 636 aa11.17□□□□□ -0.62
CDH23-211ENST00000475158 IL17REQ8NFR9 667 aa11.17□□□□□ -0.62
CDH23-211ENST00000475158 GSPT1P15170 499 aaKnown RBP11.16□□□□□ -0.62
CDH23-211ENST00000475158 NCOA7Q8NI08 942 aa11.16□□□□□ -0.62
CDH23-211ENST00000475158 ZNF496Q96IT1 587 aaPredicted RBP11.16□□□□□ -0.62
CDH23-211ENST00000475158 TSPYL1Q9H0U9 437 aa11.16□□□□□ -0.62
CDH23-211ENST00000475158 DDX21Q9NR30 783 aaKnown RBP eCLIP11.16□□□□□ -0.62
CDH23-211ENST00000475158 PAG1Q9NWQ8 432 aa11.16□□□□□ -0.62
CDH23-211ENST00000475158 URI1O94763 535 aaPredicted RBP11.16□□□□□ -0.62
CDH23-211ENST00000475158 CALRP27797 417 aaKnown RBP11.16□□□□□ -0.62
CDH23-211ENST00000475158 EIF5P55010 431 aaKnown RBP11.16□□□□□ -0.62
CDH23-211ENST00000475158 ANO6Q4KMQ2 910 aa11.16□□□□□ -0.62
CDH23-211ENST00000475158 C19orf44Q9H6X5 657 aa11.16□□□□□ -0.62
CDH23-211ENST00000475158 TBX22Q9Y458 520 aa11.16□□□□□ -0.62
CDH23-211ENST00000475158 BLMP54132 1417 aaPredicted RBP11.16□□□□□ -0.62
CDH23-211ENST00000475158 YEATS2Q9ULM3 1422 aa11.16□□□□□ -0.62
CDH23-211ENST00000475158 GTF2A1P52655 376 aaPredicted RBP11.16□□□□□ -0.62
CDH23-211ENST00000475158 MFSD6Q6ZSS7 791 aa11.16□□□□□ -0.62
CDH23-211ENST00000475158 TMC6Q7Z403 805 aa11.16□□□□□ -0.62
CDH23-211ENST00000475158 CCDC24Q8N4L8 307 aa11.16□□□□□ -0.62
CDH23-211ENST00000475158 ZNHIT6Q9NWK9 470 aaKnown RBP11.16□□□□□ -0.62
CDH23-211ENST00000475158 TSPY2A6NKD2 308 aa11.16□□□□□ -0.62
CDH23-211ENST00000475158 MCM5P33992 734 aa11.16□□□□□ -0.62
CDH23-211ENST00000475158 NLRP5P59047 1200 aa11.16□□□□□ -0.62
CDH23-211ENST00000475158 SIRT1Q96EB6 747 aa11.16□□□□□ -0.62
CDH23-211ENST00000475158 ZSWIM4Q9H7M6 989 aa11.16□□□□□ -0.62
CDH23-211ENST00000475158 DDX19AQ9NUU7 478 aaKnown RBP11.16□□□□□ -0.62
CDH23-211ENST00000475158 MAST1Q9Y2H9 1570 aa11.15□□□□□ -0.62
CDH23-211ENST00000475158 PBRM1Q86U86 1689 aa11.15□□□□□ -0.62
CDH23-211ENST00000475158 IBSPP21815 317 aaPredicted RBP11.15□□□□□ -0.62
CDH23-211ENST00000475158 ATP6V1AP38606 617 aa11.15□□□□□ -0.62
CDH23-211ENST00000475158 SSRP1Q08945 709 aaKnown RBP11.15□□□□□ -0.62
CDH23-211ENST00000475158 STIM1Q13586 685 aa11.15□□□□□ -0.62
CDH23-211ENST00000475158 ARHGAP29Q52LW3 1261 aa11.15□□□□□ -0.62
CDH23-211ENST00000475158 CCDC186Q7Z3E2 898 aa11.15□□□□□ -0.62
CDH23-211ENST00000475158 ZKSCAN3Q9BRR0 538 aa11.15□□□□□ -0.62
CDH23-211ENST00000475158 NCOA5Q9HCD5 579 aaKnown RBP11.15□□□□□ -0.62
CDH23-211ENST00000475158 NIP7Q9Y221 180 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDH23-211ENST00000475158 ZKSCAN5Q9Y2L8 839 aa11.15□□□□□ -0.62
CDH23-211ENST00000475158 ANAPC15P60006 121 aa11.15□□□□□ -0.62
CDH23-211ENST00000475158 OTUD7BQ6GQQ9 843 aa11.15□□□□□ -0.62
CDH23-211ENST00000475158 WASF1Q92558 559 aa11.15□□□□□ -0.62
CDH23-211ENST00000475158 ZNF444Q8N0Y2 327 aaPredicted RBP11.15□□□□□ -0.63
CDH23-211ENST00000475158 SUCLG2Q96I99 432 aa11.15□□□□□ -0.63
CDH23-211ENST00000475158 USP44Q9H0E7 712 aa11.15□□□□□ -0.63
CDH23-211ENST00000475158 PRM3Q9NNZ6 103 aa11.15□□□□□ -0.63
CDH23-211ENST00000475158 CCDC196A0A1B0GTZ2 297 aa11.14□□□□□ -0.63
CDH23-211ENST00000475158 F8W031 263 aaPredicted RBP11.14□□□□□ -0.63
CDH23-211ENST00000475158 TOP1P11387 765 aaKnown RBP11.14□□□□□ -0.63
CDH23-211ENST00000475158 CYP7A1P22680 504 aa11.14□□□□□ -0.63
CDH23-211ENST00000475158 IL15P40933 162 aaPredicted RBP11.14□□□□□ -0.63
CDH23-211ENST00000475158 AXDND1Q5T1B0 1012 aaPredicted RBP11.14□□□□□ -0.63
CDH23-211ENST00000475158 ALG1Q9BT22 464 aa11.14□□□□□ -0.63
CDH23-211ENST00000475158 HMG20BQ9P0W2 317 aa11.14□□□□□ -0.63
CDH23-211ENST00000475158 DACH1Q9UI36 760 aa11.14□□□□□ -0.63
CDH23-211ENST00000475158 SMTNL1A8MU46 457 aa11.14□□□□□ -0.63
CDH23-211ENST00000475158 FAM193AP78312 1265 aa11.14□□□□□ -0.63
CDH23-211ENST00000475158 DHX37Q8IY37 1157 aaKnown RBP11.14□□□□□ -0.63
CDH23-211ENST00000475158 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
CDH23-211ENST00000475158 PALD1Q9ULE6 856 aa11.14□□□□□ -0.63
CDH23-211ENST00000475158 ZFYVE9O95405 1425 aa11.14□□□□□ -0.63
CDH23-211ENST00000475158 PRC1O43663 620 aa11.14□□□□□ -0.63
CDH23-211ENST00000475158 AFMP43652 599 aa11.14□□□□□ -0.63
CDH23-211ENST00000475158 UBXN4Q92575 508 aa11.14□□□□□ -0.63
CDH23-211ENST00000475158 CCDC171Q6TFL3 1326 aa11.14□□□□□ -0.63
CDH23-211ENST00000475158 EPB41L2O43491 1005 aaKnown RBP11.13□□□□□ -0.63
CDH23-211ENST00000475158 IDEP14735 1019 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms