RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 MTX1Q13505 466 aa25.44■■□□□ 1.66
SH3D21-202ENST00000474766 RILPL2Q969X0 211 aa25.44■■□□□ 1.66
SH3D21-202ENST00000474766 KIF1BPQ96EK5 621 aa25.44■■□□□ 1.66
SH3D21-202ENST00000474766 C4BP0C0L5 1744 aa25.44■■□□□ 1.66
SH3D21-202ENST00000474766 COL5A3P25940 1745 aaPredicted RBP25.44■■□□□ 1.66
SH3D21-202ENST00000474766 MYRIPQ8NFW9 859 aa25.44■■□□□ 1.66
SH3D21-202ENST00000474766 PRIMPOLQ96LW4 560 aa25.44■■□□□ 1.66
SH3D21-202ENST00000474766 CCDC94Q9BW85 323 aaPredicted RBP25.44■■□□□ 1.66
SH3D21-202ENST00000474766 CICQ96RK0 1608 aaPredicted RBP25.44■■□□□ 1.66
SH3D21-202ENST00000474766 ALDH1L1O75891 902 aa25.43■■□□□ 1.66
SH3D21-202ENST00000474766 ATP6V1AP38606 617 aa25.43■■□□□ 1.66
SH3D21-202ENST00000474766 TSPY26PQ9H489 355 aa25.43■■□□□ 1.66
SH3D21-202ENST00000474766 UTP14CQ5TAP6 766 aaKnown RBP25.42■■□□□ 1.66
SH3D21-202ENST00000474766 AKT1S1Q96B36 256 aa25.42■■□□□ 1.66
SH3D21-202ENST00000474766 PHF14O94880 888 aa25.42■■□□□ 1.66
SH3D21-202ENST00000474766 UVSSAQ2YD98 709 aa25.42■■□□□ 1.66
SH3D21-202ENST00000474766 HSP90AB4PQ58FF6 505 aa25.42■■□□□ 1.66
SH3D21-202ENST00000474766 NUTM1Q86Y26 1132 aa25.42■■□□□ 1.66
SH3D21-202ENST00000474766 PI4K2BQ8TCG2 481 aa25.42■■□□□ 1.66
SH3D21-202ENST00000474766 BRD1O95696 1058 aa25.41■■□□□ 1.66
SH3D21-202ENST00000474766 MCCP23508 829 aa25.41■■□□□ 1.66
SH3D21-202ENST00000474766 SLC15A2Q16348 729 aa25.41■■□□□ 1.66
SH3D21-202ENST00000474766 KSR2Q6VAB6 950 aa25.41■■□□□ 1.66
SH3D21-202ENST00000474766 LINC00116Q8NCU8 138 aa25.41■■□□□ 1.66
SH3D21-202ENST00000474766 ZNF496Q96IT1 587 aaPredicted RBP25.41■■□□□ 1.66
SH3D21-202ENST00000474766 HMGN5P82970 282 aaKnown RBP25.41■■□□□ 1.66
SH3D21-202ENST00000474766 FAM184AQ8NB25 1140 aa25.41■■□□□ 1.66
SH3D21-202ENST00000474766 STK32BQ9NY57 414 aa25.41■■□□□ 1.66
SH3D21-202ENST00000474766 PROSER3Q2NL68 480 aa25.4■■□□□ 1.66
SH3D21-202ENST00000474766 TTC5Q8N0Z6 440 aa25.4■■□□□ 1.66
SH3D21-202ENST00000474766 MAP3K2Q9Y2U5 619 aa25.4■■□□□ 1.66
SH3D21-202ENST00000474766 NEK4P51957 841 aa25.39■■□□□ 1.66
SH3D21-202ENST00000474766 USP42Q9H9J4 1324 aaKnown RBP25.39■■□□□ 1.66
SH3D21-202ENST00000474766 QSER1Q2KHR3 1735 aa25.39■■□□□ 1.66
SH3D21-202ENST00000474766 GTF2F1P35269 517 aaKnown RBP eCLIP25.39■■□□□ 1.652e-7■■■■□ 24.9
SH3D21-202ENST00000474766 CUL4AQ13619 759 aa25.39■■□□□ 1.65
SH3D21-202ENST00000474766 KLHL34Q8N239 644 aa25.39■■□□□ 1.65
SH3D21-202ENST00000474766 ANO2Q9NQ90 1003 aa25.39■■□□□ 1.65
SH3D21-202ENST00000474766 HYPKQ9NX55 129 aa25.39■■□□□ 1.65
SH3D21-202ENST00000474766 PALD1Q9ULE6 856 aa25.39■■□□□ 1.65
SH3D21-202ENST00000474766 CASZ1Q86V15 1759 aa25.38■■□□□ 1.65
SH3D21-202ENST00000474766 INTS4Q96HW7 963 aaKnown RBP25.38■■□□□ 1.65
SH3D21-202ENST00000474766 MYH14Q7Z406 1995 aaKnown RBP25.38■■□□□ 1.65
SH3D21-202ENST00000474766 UBR3Q6ZT12 1888 aa25.38■■□□□ 1.65
SH3D21-202ENST00000474766 PTMAP06454 111 aaKnown RBP25.37■■□□□ 1.65
SH3D21-202ENST00000474766 NSFL1CQ9UNZ2 370 aaKnown RBP25.37■■□□□ 1.65
SH3D21-202ENST00000474766 PDE4CQ08493 712 aa25.37■■□□□ 1.65
SH3D21-202ENST00000474766 PDGFDQ9GZP0 370 aaPredicted RBP25.37■■□□□ 1.65
SH3D21-202ENST00000474766 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.37■■□□□ 1.65
SH3D21-202ENST00000474766 PRAMEF22A3QJZ6 481 aa25.36■■□□□ 1.65
SH3D21-202ENST00000474766 HDAC5Q9UQL6 1122 aa25.36■■□□□ 1.65
SH3D21-202ENST00000474766 TMX3Q96JJ7 454 aa25.36■■□□□ 1.65
SH3D21-202ENST00000474766 FMNL2Q96PY5 1086 aa25.36■■□□□ 1.65
SH3D21-202ENST00000474766 PIBF1Q8WXW3 757 aa25.35■■□□□ 1.65
SH3D21-202ENST00000474766 IL25Q9H293 177 aa25.35■■□□□ 1.65
SH3D21-202ENST00000474766 DDX21Q9NR30 783 aaKnown RBP eCLIP25.35■■□□□ 1.65
SH3D21-202ENST00000474766 FGD1P98174 961 aa25.34■■□□□ 1.65
SH3D21-202ENST00000474766 AMIGO3Q86WK7 504 aa25.34■■□□□ 1.65
SH3D21-202ENST00000474766 DNAJC10Q8IXB1 793 aa25.34■■□□□ 1.65
SH3D21-202ENST00000474766 C9orf78Q9NZ63 289 aaPredicted RBP25.34■■□□□ 1.65
SH3D21-202ENST00000474766 UTYO14607 1347 aa25.34■■□□□ 1.65
SH3D21-202ENST00000474766 TTC41PQ6P2S7 1318 aa25.34■■□□□ 1.65
SH3D21-202ENST00000474766 PDIA6Q15084 440 aa25.34■■□□□ 1.65
SH3D21-202ENST00000474766 LINS1Q8NG48 757 aa25.34■■□□□ 1.65
SH3D21-202ENST00000474766 SRCAPQ6ZRS2 3230 aa25.33■■□□□ 1.65
SH3D21-202ENST00000474766 TFCP2L1Q9NZI6 479 aa25.33■■□□□ 1.65
SH3D21-202ENST00000474766 HSPA4P34932 840 aa25.32■■□□□ 1.64
SH3D21-202ENST00000474766 DMTNQ08495 405 aa25.32■■□□□ 1.64
SH3D21-202ENST00000474766 PNPLA7Q6ZV29 1317 aa25.32■■□□□ 1.64
SH3D21-202ENST00000474766 SGSM2O43147 1006 aa25.32■■□□□ 1.64
SH3D21-202ENST00000474766 SMIM5Q71RC9 77 aa25.32■■□□□ 1.64
SH3D21-202ENST00000474766 RNF214Q8ND24 703 aa25.32■■□□□ 1.64
SH3D21-202ENST00000474766 CWF19L2Q2TBE0 894 aaKnown RBP25.31■■□□□ 1.64
SH3D21-202ENST00000474766 CNTROBQ8N137 903 aa25.31■■□□□ 1.64
SH3D21-202ENST00000474766 AK7Q96M32 723 aa25.31■■□□□ 1.64
SH3D21-202ENST00000474766 DDX58O95786 925 aaKnown RBP25.3■■□□□ 1.64
SH3D21-202ENST00000474766 CNTNAP4Q9C0A0 1308 aa25.3■■□□□ 1.64
SH3D21-202ENST00000474766 GLRX3O76003 335 aaKnown RBP25.29■■□□□ 1.64
SH3D21-202ENST00000474766 ERC1Q8IUD2 1116 aa25.29■■□□□ 1.64
SH3D21-202ENST00000474766 USP16Q9Y5T5 823 aa25.29■■□□□ 1.64
SH3D21-202ENST00000474766 RAD50Q92878 1312 aa25.29■■□□□ 1.64
SH3D21-202ENST00000474766 GRM8O00222 908 aa25.29■■□□□ 1.64
SH3D21-202ENST00000474766 MAP4K4O95819 1239 aaPredicted RBP25.29■■□□□ 1.64
SH3D21-202ENST00000474766 SNRPA1P09661 255 aaKnown RBP25.29■■□□□ 1.64
SH3D21-202ENST00000474766 CYP19A1P11511 503 aaPredicted RBP25.29■■□□□ 1.64
SH3D21-202ENST00000474766 CRKLP46109 303 aaKnown RBP25.29■■□□□ 1.64
SH3D21-202ENST00000474766 CLASRPQ8N2M8 674 aaKnown RBP25.29■■□□□ 1.64
SH3D21-202ENST00000474766 SPTLC3Q9NUV7 552 aa25.29■■□□□ 1.64
SH3D21-202ENST00000474766 GNPATO15228 680 aa25.28■■□□□ 1.64
SH3D21-202ENST00000474766 LETM1O95202 739 aaPredicted RBP25.28■■□□□ 1.64
SH3D21-202ENST00000474766 HMGB2P26583 209 aaKnown RBP25.28■■□□□ 1.64
SH3D21-202ENST00000474766 OS9Q13438 667 aaPredicted RBP25.28■■□□□ 1.64
SH3D21-202ENST00000474766 KAZALD1Q96I82 304 aa25.28■■□□□ 1.64
SH3D21-202ENST00000474766 NOLC1Q14978 699 aaKnown RBP eCLIP25.27■■□□□ 1.64
SH3D21-202ENST00000474766 TMEM87AQ8NBN3 555 aa25.27■■□□□ 1.64
SH3D21-202ENST00000474766 PDIA4P13667 645 aaKnown RBP25.27■■□□□ 1.64
SH3D21-202ENST00000474766 DNTTIP2Q5QJE6 756 aaKnown RBP25.27■■□□□ 1.64
SH3D21-202ENST00000474766 RC3H1Q5TC82 1133 aaKnown RBP25.27■■□□□ 1.64
SH3D21-202ENST00000474766 INTS5Q6P9B9 1019 aaKnown RBP25.26■■□□□ 1.63
SH3D21-202ENST00000474766 LSG1Q9H089 658 aaKnown RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms