RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 MTFR1LQ9H019 292 aa12.57□□□□□ -0.4
COL8A1-206ENST00000474648 HCLS1P14317 486 aaPredicted RBP12.56□□□□□ -0.4
COL8A1-206ENST00000474648 ERICH6BQ5W0A0 696 aa12.56□□□□□ -0.4
COL8A1-206ENST00000474648 C3orf67Q6ZVT6 689 aa12.56□□□□□ -0.4
COL8A1-206ENST00000474648 SIRT2Q8IXJ6 389 aa12.56□□□□□ -0.4
COL8A1-206ENST00000474648 SGIP1Q9BQI5 828 aa12.56□□□□□ -0.4
COL8A1-206ENST00000474648 PARP3Q9Y6F1 533 aa12.56□□□□□ -0.4
COL8A1-206ENST00000474648 CSF1RP07333 972 aa12.55□□□□□ -0.4
COL8A1-206ENST00000474648 ATP8B2P98198 1209 aa12.55□□□□□ -0.4
COL8A1-206ENST00000474648 RABL6Q3YEC7 729 aaPredicted RBP12.55□□□□□ -0.4
COL8A1-206ENST00000474648 CNBD1Q8NA66 436 aa12.55□□□□□ -0.4
COL8A1-206ENST00000474648 BICC1Q9H694 974 aaKnown RBP12.55□□□□□ -0.4
COL8A1-206ENST00000474648 HDAC5Q9UQL6 1122 aa12.55□□□□□ -0.4
COL8A1-206ENST00000474648 ABCC12Q96J65 1359 aa12.55□□□□□ -0.4
COL8A1-206ENST00000474648 PDE8AO60658 829 aa12.54□□□□□ -0.4
COL8A1-206ENST00000474648 GTF2E1P29083 439 aaPredicted RBP12.54□□□□□ -0.4
COL8A1-206ENST00000474648 PTGER2P43116 358 aa12.54□□□□□ -0.4
COL8A1-206ENST00000474648 MTX1Q13505 466 aa12.54□□□□□ -0.4
COL8A1-206ENST00000474648 CEP85Q6P2H3 762 aa12.54□□□□□ -0.4
COL8A1-206ENST00000474648 TTLL11Q8NHH1 800 aa12.54□□□□□ -0.4
COL8A1-206ENST00000474648 CASZ1Q86V15 1759 aa12.53□□□□□ -0.4
COL8A1-206ENST00000474648 KLRG2A4D1S0 409 aaPredicted RBP12.53□□□□□ -0.4
COL8A1-206ENST00000474648 SF3B3Q15393 1217 aaKnown RBP12.53□□□□□ -0.4
COL8A1-206ENST00000474648 LMBR1LQ6UX01 489 aa12.53□□□□□ -0.4
COL8A1-206ENST00000474648 RPAP2Q8IXW5 612 aaPredicted RBP12.53□□□□□ -0.4
COL8A1-206ENST00000474648 CREBZFQ9NS37 354 aa12.53□□□□□ -0.4
COL8A1-206ENST00000474648 ANKRD36CQ5JPF3 1778 aa12.53□□□□□ -0.4
COL8A1-206ENST00000474648 N4BP2Q86UW6 1770 aaPredicted RBP12.53□□□□□ -0.4
COL8A1-206ENST00000474648 PNMA6EA0A0J9YXQ4 647 aa12.52□□□□□ -0.41
COL8A1-206ENST00000474648 HSP90B1P14625 803 aaKnown RBP12.52□□□□□ -0.41
COL8A1-206ENST00000474648 CTSWP56202 376 aa12.52□□□□□ -0.41
COL8A1-206ENST00000474648 ST5P78524 1137 aa12.52□□□□□ -0.41
COL8A1-206ENST00000474648 BRIP1Q9BX63 1249 aa12.52□□□□□ -0.41
COL8A1-206ENST00000474648 COL24A1Q17RW2 1714 aa12.51□□□□□ -0.41
COL8A1-206ENST00000474648 IGHDP01880 384 aa12.51□□□□□ -0.41
COL8A1-206ENST00000474648 RFX5P48382 616 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-206ENST00000474648 SSH3Q8TE77 659 aa12.51□□□□□ -0.41
COL8A1-206ENST00000474648 NLRP3Q96P20 1036 aa12.51□□□□□ -0.41
COL8A1-206ENST00000474648 CCDC85AQ96PX6 553 aaPredicted RBP12.51□□□□□ -0.41
COL8A1-206ENST00000474648 GTF3C3Q9Y5Q9 886 aa12.51□□□□□ -0.41
COL8A1-206ENST00000474648 NPHP1O15259 732 aa12.5□□□□□ -0.41
COL8A1-206ENST00000474648 POLD1P28340 1107 aa12.5□□□□□ -0.41
COL8A1-206ENST00000474648 HDAC1Q13547 482 aaPredicted RBP12.5□□□□□ -0.41
COL8A1-206ENST00000474648 CRY2Q49AN0 593 aa12.5□□□□□ -0.41
COL8A1-206ENST00000474648 GREM2Q9H772 168 aa12.5□□□□□ -0.41
COL8A1-206ENST00000474648 RIC1Q4ADV7 1423 aa12.5□□□□□ -0.41
COL8A1-206ENST00000474648 AFDNP55196 1824 aaKnown RBP12.49□□□□□ -0.41
COL8A1-206ENST00000474648 SRGAP3O43295 1099 aa12.49□□□□□ -0.41
COL8A1-206ENST00000474648 FAM161AQ3B820 660 aa12.49□□□□□ -0.41
COL8A1-206ENST00000474648 CCDC152Q4G0S7 254 aa12.49□□□□□ -0.41
COL8A1-206ENST00000474648 SPON1Q9HCB6 807 aa12.49□□□□□ -0.41
COL8A1-206ENST00000474648 SEC31BQ9NQW1 1179 aa12.49□□□□□ -0.41
COL8A1-206ENST00000474648 PPP4R2Q9NY27 417 aa12.49□□□□□ -0.41
COL8A1-206ENST00000474648 RTL9Q8NET4 1388 aa12.48□□□□□ -0.41
COL8A1-206ENST00000474648 ITGA6P23229 1130 aa12.48□□□□□ -0.41
COL8A1-206ENST00000474648 HOXA10P31260 410 aaPredicted RBP12.48□□□□□ -0.41
COL8A1-206ENST00000474648 PDE6BP35913 854 aa12.48□□□□□ -0.41
COL8A1-206ENST00000474648 PTPN12Q05209 780 aaKnown RBP12.48□□□□□ -0.41
COL8A1-206ENST00000474648 KLHDC4Q8TBB5 520 aa12.48□□□□□ -0.41
COL8A1-206ENST00000474648 CHMP3Q9Y3E7 222 aa12.48□□□□□ -0.41
COL8A1-206ENST00000474648 NRXN2Q9P2S2 1712 aa12.48□□□□□ -0.41
COL8A1-206ENST00000474648 SRGNP10124 158 aa12.47□□□□□ -0.41
COL8A1-206ENST00000474648 IFIT5Q13325 482 aaKnown RBP12.47□□□□□ -0.41
COL8A1-206ENST00000474648 ZNF594Q96JF6 807 aaPredicted RBP12.47□□□□□ -0.41
COL8A1-206ENST00000474648 RWDD1Q9H446 243 aaPredicted RBP12.47□□□□□ -0.41
COL8A1-206ENST00000474648 DCTPP1Q9H773 170 aa12.47□□□□□ -0.41
COL8A1-206ENST00000474648 COPRSQ9NQ92 184 aa12.47□□□□□ -0.41
COL8A1-206ENST00000474648 PA2G4Q9UQ80 394 aaKnown RBP12.47□□□□□ -0.41
COL8A1-206ENST00000474648 NOP58Q9Y2X3 529 aaKnown RBP12.47□□□□□ -0.41
COL8A1-206ENST00000474648 C10orf71Q711Q0 1435 aa12.46□□□□□ -0.41
COL8A1-206ENST00000474648 ANKRD18BA2A2Z9 1011 aa12.46□□□□□ -0.41
COL8A1-206ENST00000474648 HMMRO75330 724 aa12.46□□□□□ -0.41
COL8A1-206ENST00000474648 CCDC57Q2TAC2 916 aa12.46□□□□□ -0.41
COL8A1-206ENST00000474648 B4GALNT3Q6L9W6 998 aa12.46□□□□□ -0.41
COL8A1-206ENST00000474648 C2CD5Q86YS7 1000 aa12.46□□□□□ -0.41
COL8A1-206ENST00000474648 CELF1Q92879 486 aaKnown RBP12.46□□□□□ -0.41
COL8A1-206ENST00000474648 NPR1P16066 1061 aa12.45□□□□□ -0.42
COL8A1-206ENST00000474648 KCNA3P22001 575 aa12.45□□□□□ -0.42
COL8A1-206ENST00000474648 CHRNA5P30532 468 aa12.45□□□□□ -0.42
COL8A1-206ENST00000474648 DDX46Q7L014 1031 aaKnown RBP12.45□□□□□ -0.42
COL8A1-206ENST00000474648 MASTLQ96GX5 879 aa12.45□□□□□ -0.42
COL8A1-206ENST00000474648 RBM17Q96I25 401 aaKnown RBP12.45□□□□□ -0.42
COL8A1-206ENST00000474648 CRAMP1Q96RY5 1269 aa12.45□□□□□ -0.42
COL8A1-206ENST00000474648 PUS3Q9BZE2 481 aaKnown RBP12.45□□□□□ -0.42
COL8A1-206ENST00000474648 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
COL8A1-206ENST00000474648 CD2APQ9Y5K6 639 aa12.45□□□□□ -0.42
COL8A1-206ENST00000474648 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
COL8A1-206ENST00000474648 KDM2BQ8NHM5 1336 aa12.44□□□□□ -0.42
COL8A1-206ENST00000474648 A0A0G2JLW4 131 aa12.44□□□□□ -0.42
COL8A1-206ENST00000474648 H0YIN7 160 aa12.44□□□□□ -0.42
COL8A1-206ENST00000474648 SURF6O75683 361 aaKnown RBP12.44□□□□□ -0.42
COL8A1-206ENST00000474648 DPEP1P16444 411 aa12.44□□□□□ -0.42
COL8A1-206ENST00000474648 TGFB2P61812 414 aa12.44□□□□□ -0.42
COL8A1-206ENST00000474648 RPS8P62241 208 aaKnown RBP12.44□□□□□ -0.42
COL8A1-206ENST00000474648 GRAPQ13588 217 aa12.44□□□□□ -0.42
COL8A1-206ENST00000474648 STYK1Q6J9G0 422 aa12.44□□□□□ -0.42
COL8A1-206ENST00000474648 ATG9AQ7Z3C6 839 aa12.44□□□□□ -0.42
COL8A1-206ENST00000474648 SMC5Q8IY18 1101 aa12.44□□□□□ -0.42
COL8A1-206ENST00000474648 GRAPLQ8TC17 118 aaPredicted RBP12.44□□□□□ -0.42
COL8A1-206ENST00000474648 CCDC136Q96JN2 1154 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms