RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 POTEJP0CG39 1038 aa11.46□□□□□ -0.57
TNFRSF9-202ENST00000474475 IARSP41252 1262 aaKnown RBP11.46□□□□□ -0.57
TNFRSF9-202ENST00000474475 PSEN1P49768 467 aa11.46□□□□□ -0.57
TNFRSF9-202ENST00000474475 AIMP1Q12904 312 aaKnown RBP11.46□□□□□ -0.57
TNFRSF9-202ENST00000474475 SLC10A5Q5PT55 438 aa11.46□□□□□ -0.57
TNFRSF9-202ENST00000474475 L3MBTL3Q96JM7 780 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF9-202ENST00000474475 CRAMP1Q96RY5 1269 aa11.46□□□□□ -0.57
TNFRSF9-202ENST00000474475 UTP14AQ9BVJ6 771 aaKnown RBP11.46□□□□□ -0.57
TNFRSF9-202ENST00000474475 DDX21Q9NR30 783 aaKnown RBP eCLIP11.46□□□□□ -0.57
TNFRSF9-202ENST00000474475 LAMB2P55268 1798 aa11.46□□□□□ -0.58
TNFRSF9-202ENST00000474475 SCN4AP35499 1836 aa11.45□□□□□ -0.58
TNFRSF9-202ENST00000474475 CC2D2BQ6DHV5 1058 aa11.45□□□□□ -0.58
TNFRSF9-202ENST00000474475 NLRP10Q86W26 655 aa11.45□□□□□ -0.58
TNFRSF9-202ENST00000474475 RBM17Q96I25 401 aaKnown RBP11.45□□□□□ -0.58
TNFRSF9-202ENST00000474475 PSMD1Q99460 953 aa11.45□□□□□ -0.58
TNFRSF9-202ENST00000474475 CHPF2Q9P2E5 772 aa11.45□□□□□ -0.58
TNFRSF9-202ENST00000474475 STK24Q9Y6E0 443 aa11.45□□□□□ -0.58
TNFRSF9-202ENST00000474475 FZD9O00144 591 aa11.44□□□□□ -0.58
TNFRSF9-202ENST00000474475 TCERG1O14776 1098 aaKnown RBP11.44□□□□□ -0.58
TNFRSF9-202ENST00000474475 PPEF1O14829 653 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF9-202ENST00000474475 TCIRG1Q13488 830 aa11.44□□□□□ -0.58
TNFRSF9-202ENST00000474475 HSP90AB3PQ58FF7 597 aa11.44□□□□□ -0.58
TNFRSF9-202ENST00000474475 HDGFL1Q5TGJ6 251 aa11.44□□□□□ -0.58
TNFRSF9-202ENST00000474475 JMYQ8N9B5 988 aa11.44□□□□□ -0.58
TNFRSF9-202ENST00000474475 SP7Q8TDD2 431 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF9-202ENST00000474475 CFAP44Q96MT7 982 aa11.44□□□□□ -0.58
TNFRSF9-202ENST00000474475 NLRP3Q96P20 1036 aa11.44□□□□□ -0.58
TNFRSF9-202ENST00000474475 RNF123Q5XPI4 1314 aa11.43□□□□□ -0.58
TNFRSF9-202ENST00000474475 IQCA1LA6NCM1 817 aa11.43□□□□□ -0.58
TNFRSF9-202ENST00000474475 APAF1O14727 1248 aa11.43□□□□□ -0.58
TNFRSF9-202ENST00000474475 HOXB7P09629 217 aa11.43□□□□□ -0.58
TNFRSF9-202ENST00000474475 ZNF853P0CG23 659 aa11.43□□□□□ -0.58
TNFRSF9-202ENST00000474475 COL13A1Q5TAT6 717 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF9-202ENST00000474475 TAF1DQ9H5J8 278 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF9-202ENST00000474475 MBIPQ9NS73 344 aa11.43□□□□□ -0.58
TNFRSF9-202ENST00000474475 ADAMTSL1Q8N6G6 1762 aa11.43□□□□□ -0.58
TNFRSF9-202ENST00000474475 ABCC4O15439 1325 aa11.42□□□□□ -0.58
TNFRSF9-202ENST00000474475 HCLS1P14317 486 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF9-202ENST00000474475 DUSP27Q5VZP5 1158 aa11.42□□□□□ -0.58
TNFRSF9-202ENST00000474475 ZNF428Q96B54 188 aa11.42□□□□□ -0.58
TNFRSF9-202ENST00000474475 MS4A3Q96HJ5 214 aa11.42□□□□□ -0.58
TNFRSF9-202ENST00000474475 DBF4Q9UBU7 674 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF9-202ENST00000474475 SH3TC1Q8TE82 1336 aa11.41□□□□□ -0.58
TNFRSF9-202ENST00000474475 DDX60Q8IY21 1712 aaKnown RBP11.41□□□□□ -0.58
TNFRSF9-202ENST00000474475 EVX2Q03828 476 aa11.41□□□□□ -0.58
TNFRSF9-202ENST00000474475 GRIPAP1Q4V328 841 aa11.41□□□□□ -0.58
TNFRSF9-202ENST00000474475 CCDC184Q52MB2 194 aa11.41□□□□□ -0.58
TNFRSF9-202ENST00000474475 ANKRD13DQ6ZTN6 518 aa11.41□□□□□ -0.58
TNFRSF9-202ENST00000474475 LDHDQ86WU2 507 aa11.41□□□□□ -0.58
TNFRSF9-202ENST00000474475 GPC2Q8N158 579 aa11.41□□□□□ -0.58
TNFRSF9-202ENST00000474475 PLBD2Q8NHP8 589 aa11.41□□□□□ -0.58
TNFRSF9-202ENST00000474475 JDP2Q8WYK2 163 aa11.41□□□□□ -0.58
TNFRSF9-202ENST00000474475 TRMT112Q9UI30 125 aaKnown RBP11.41□□□□□ -0.58
TNFRSF9-202ENST00000474475 HACL1Q9UJ83 578 aa11.41□□□□□ -0.58
TNFRSF9-202ENST00000474475 ATP6V0A2Q9Y487 856 aa11.41□□□□□ -0.58
TNFRSF9-202ENST00000474475 LTBP1Q14766 1721 aa11.4□□□□□ -0.58
TNFRSF9-202ENST00000474475 EPHX2P34913 555 aa11.4□□□□□ -0.58
TNFRSF9-202ENST00000474475 LARGE2Q8N3Y3 721 aa11.4□□□□□ -0.58
TNFRSF9-202ENST00000474475 ISCA1Q9BUE6 129 aa11.4□□□□□ -0.58
TNFRSF9-202ENST00000474475 IFT57Q9NWB7 429 aa11.4□□□□□ -0.58
TNFRSF9-202ENST00000474475 HYPKQ9NX55 129 aa11.4□□□□□ -0.58
TNFRSF9-202ENST00000474475 TAF1P21675 1872 aa11.4□□□□□ -0.59
TNFRSF9-202ENST00000474475 PASKQ96RG2 1323 aa11.39□□□□□ -0.59
TNFRSF9-202ENST00000474475 ATP5J2-PTCD1G3V325 749 aa11.39□□□□□ -0.59
TNFRSF9-202ENST00000474475 BBOX1O75936 387 aa11.39□□□□□ -0.59
TNFRSF9-202ENST00000474475 ITGBL1O95965 494 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF9-202ENST00000474475 EIF6P56537 245 aaKnown RBP11.39□□□□□ -0.59
TNFRSF9-202ENST00000474475 GNAI1P63096 354 aa11.39□□□□□ -0.59
TNFRSF9-202ENST00000474475 EAPPQ56P03 285 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF9-202ENST00000474475 SP8Q8IXZ3 490 aa11.39□□□□□ -0.59
TNFRSF9-202ENST00000474475 TNS4Q8IZW8 715 aa11.39□□□□□ -0.59
TNFRSF9-202ENST00000474475 GJA3Q9Y6H8 435 aa11.39□□□□□ -0.59
TNFRSF9-202ENST00000474475 ELL2O00472 640 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF9-202ENST00000474475 PPIP5K2O43314 1243 aa11.38□□□□□ -0.59
TNFRSF9-202ENST00000474475 CALD1Q05682 793 aaKnown RBP11.38□□□□□ -0.59
TNFRSF9-202ENST00000474475 GRAPQ13588 217 aa11.38□□□□□ -0.59
TNFRSF9-202ENST00000474475 AOC3Q16853 763 aa11.38□□□□□ -0.59
TNFRSF9-202ENST00000474475 DDX46Q7L014 1031 aaKnown RBP11.38□□□□□ -0.59
TNFRSF9-202ENST00000474475 NIM1KQ8IY84 436 aa11.38□□□□□ -0.59
TNFRSF9-202ENST00000474475 C8orf58Q8NAV2 365 aa11.38□□□□□ -0.59
TNFRSF9-202ENST00000474475 GRAPLQ8TC17 118 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF9-202ENST00000474475 FAM89AQ96GI7 184 aa11.38□□□□□ -0.59
TNFRSF9-202ENST00000474475 RTFDC1Q9BY42 306 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF9-202ENST00000474475 PHAXQ9H814 394 aaKnown RBP11.38□□□□□ -0.59
TNFRSF9-202ENST00000474475 COL4A1P02462 1669 aa11.38□□□□□ -0.59
TNFRSF9-202ENST00000474475 LRRC37AA6NMS7 1700 aa11.38□□□□□ -0.59
TNFRSF9-202ENST00000474475 DUOX1Q9NRD9 1551 aa11.37□□□□□ -0.59
TNFRSF9-202ENST00000474475 SCNN1DP51172 638 aa11.37□□□□□ -0.59
TNFRSF9-202ENST00000474475 PLCB2Q00722 1185 aa11.37□□□□□ -0.59
TNFRSF9-202ENST00000474475 DPP8Q6V1X1 898 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF9-202ENST00000474475 PNMA8AQ86V59 439 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF9-202ENST00000474475 TMX4Q9H1E5 349 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF9-202ENST00000474475 EPS15P42566 896 aa11.36□□□□□ -0.59
TNFRSF9-202ENST00000474475 TRIM28Q13263 835 aaKnown RBP11.36□□□□□ -0.59
TNFRSF9-202ENST00000474475 SF3B3Q15393 1217 aaKnown RBP11.36□□□□□ -0.59
TNFRSF9-202ENST00000474475 RTL5Q5HYW3 569 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF9-202ENST00000474475 MAP1SQ66K74 1059 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF9-202ENST00000474475 MPNDQ8N594 471 aa11.36□□□□□ -0.59
TNFRSF9-202ENST00000474475 SUPT20HQ8NEM7 779 aa11.36□□□□□ -0.59
TNFRSF9-202ENST00000474475 VPS33BQ9H267 617 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms