RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 GREM2Q9H772 168 aa21.93■■□□□ 1.1
VARS2-206ENST00000473916 ONECUT3O60422 494 aaPredicted RBP21.92■■□□□ 1.1
VARS2-206ENST00000473916 TTLL11Q8NHH1 800 aa21.92■■□□□ 1.1
VARS2-206ENST00000473916 BRWD3Q6RI45 1802 aa21.92■■□□□ 1.1
VARS2-206ENST00000473916 LY75O60449 1722 aa21.92■■□□□ 1.1
VARS2-206ENST00000473916 TAF1LQ8IZX4 1826 aa21.92■■□□□ 1.1
VARS2-206ENST00000473916 CTSWP56202 376 aa21.92■■□□□ 1.1
VARS2-206ENST00000473916 CWC27Q6UX04 472 aaKnown RBP21.92■■□□□ 1.1
VARS2-206ENST00000473916 QTRT2Q9H974 415 aaKnown RBP21.92■■□□□ 1.1
VARS2-206ENST00000473916 DDX60Q8IY21 1712 aaKnown RBP21.91■■□□□ 1.1
VARS2-206ENST00000473916 EIF5BO60841 1220 aaKnown RBP21.91■■□□□ 1.1
VARS2-206ENST00000473916 IL15P40933 162 aaPredicted RBP21.91■■□□□ 1.1
VARS2-206ENST00000473916 TIMM10P62072 90 aa21.91■■□□□ 1.1
VARS2-206ENST00000473916 HSCBQ8IWL3 235 aa21.91■■□□□ 1.1
VARS2-206ENST00000473916 ZNF609O15014 1411 aa21.91■■□□□ 1.1
VARS2-206ENST00000473916 HCLS1P14317 486 aaPredicted RBP21.9■■□□□ 1.1
VARS2-206ENST00000473916 SNX21Q969T3 373 aa21.9■■□□□ 1.1
VARS2-206ENST00000473916 EVI5LQ96CN4 794 aa21.9■■□□□ 1.1
VARS2-206ENST00000473916 PALD1Q9ULE6 856 aa21.9■■□□□ 1.1
VARS2-206ENST00000473916 SGSM2O43147 1006 aa21.89■■□□□ 1.1
VARS2-206ENST00000473916 CIAO1O76071 339 aa21.89■■□□□ 1.1
VARS2-206ENST00000473916 ITGA6P23229 1130 aa21.89■■□□□ 1.1
VARS2-206ENST00000473916 IFIT5Q13325 482 aaKnown RBP21.89■■□□□ 1.1
VARS2-206ENST00000473916 AMIGO3Q86WK7 504 aa21.89■■□□□ 1.1
VARS2-206ENST00000473916 NEUROD6Q96NK8 337 aa21.89■■□□□ 1.1
VARS2-206ENST00000473916 NIP7Q9Y221 180 aaKnown RBP eCLIP21.89■■□□□ 1.09
VARS2-206ENST00000473916 CNTNAP4Q9C0A0 1308 aa21.88■■□□□ 1.09
VARS2-206ENST00000473916 TAF7LQ5H9L4 462 aa21.88■■□□□ 1.09
VARS2-206ENST00000473916 ANTXR1Q9H6X2 564 aa21.88■■□□□ 1.09
VARS2-206ENST00000473916 CCNL1Q9UK58 526 aaPredicted RBP21.88■■□□□ 1.09
VARS2-206ENST00000473916 RIC1Q4ADV7 1423 aa21.88■■□□□ 1.09
VARS2-206ENST00000473916 SCN7AQ01118 1682 aa21.87■■□□□ 1.09
VARS2-206ENST00000473916 PDE8AO60658 829 aa21.87■■□□□ 1.09
VARS2-206ENST00000473916 ATP5JP18859 108 aa21.87■■□□□ 1.09
VARS2-206ENST00000473916 DIAPH3Q9NSV4 1193 aa21.87■■□□□ 1.09
VARS2-206ENST00000473916 SPEF2Q9C093 1822 aa21.87■■□□□ 1.09
VARS2-206ENST00000473916 CASZ1Q86V15 1759 aa21.86■■□□□ 1.09
VARS2-206ENST00000473916 A0A1B0GUL7 405 aa21.86■■□□□ 1.09
VARS2-206ENST00000473916 FAM227BQ96M60 508 aa21.86■■□□□ 1.09
VARS2-206ENST00000473916 UTP14AQ9BVJ6 771 aaKnown RBP21.86■■□□□ 1.09
VARS2-206ENST00000473916 SH3TC1Q8TE82 1336 aa21.86■■□□□ 1.09
VARS2-206ENST00000473916 LAMB2P55268 1798 aa21.86■■□□□ 1.09
VARS2-206ENST00000473916 NTSR2O95665 410 aa21.85■■□□□ 1.09
VARS2-206ENST00000473916 CHGBP05060 677 aa21.85■■□□□ 1.09
VARS2-206ENST00000473916 RABEP1Q15276 862 aa21.85■■□□□ 1.09
VARS2-206ENST00000473916 DNAJC2Q99543 621 aaKnown RBP21.85■■□□□ 1.09
VARS2-206ENST00000473916 FSD1Q9BTV5 496 aa21.85■■□□□ 1.09
VARS2-206ENST00000473916 LSG1Q9H089 658 aaKnown RBP21.85■■□□□ 1.09
VARS2-206ENST00000473916 GPR108Q9NPR9 543 aa21.85■■□□□ 1.09
VARS2-206ENST00000473916 CEP126Q9P2H0 1117 aa21.85■■□□□ 1.09
VARS2-206ENST00000473916 GNPATO15228 680 aa21.84■■□□□ 1.09
VARS2-206ENST00000473916 ADORA1P30542 326 aa21.84■■□□□ 1.09
VARS2-206ENST00000473916 NMIQ13287 307 aaPredicted RBP21.84■■□□□ 1.09
VARS2-206ENST00000473916 SRP68Q9UHB9 627 aaKnown RBP21.84■■□□□ 1.09
VARS2-206ENST00000473916 COL4A1P02462 1669 aa21.84■■□□□ 1.09
VARS2-206ENST00000473916 ANKRD18BA2A2Z9 1011 aa21.84■■□□□ 1.09
VARS2-206ENST00000473916 BCL2L12Q9HB09 334 aa21.84■■□□□ 1.09
VARS2-206ENST00000473916 RAD50Q92878 1312 aa21.83■■□□□ 1.09
VARS2-206ENST00000473916 A0A0D9SFI3 127 aa21.83■■□□□ 1.09
VARS2-206ENST00000473916 LDHAL6AQ6ZMR3 332 aa21.83■■□□□ 1.09
VARS2-206ENST00000473916 RIPOR2Q9Y4F9 1068 aa21.83■■□□□ 1.09
VARS2-206ENST00000473916 C4BP0C0L5 1744 aa21.83■■□□□ 1.08
VARS2-206ENST00000473916 LRP5O75197 1615 aa21.83■■□□□ 1.08
VARS2-206ENST00000473916 PARP10Q53GL7 1025 aa21.82■■□□□ 1.08
VARS2-206ENST00000473916 BICDL1Q6ZP65 573 aa21.82■■□□□ 1.08
VARS2-206ENST00000473916 HAUS7Q99871 368 aa21.82■■□□□ 1.08
VARS2-206ENST00000473916 TAF1P21675 1872 aa21.82■■□□□ 1.08
VARS2-206ENST00000473916 C4AP0C0L4 1744 aa21.82■■□□□ 1.08
VARS2-206ENST00000473916 PTH1RQ03431 593 aa21.82■■□□□ 1.08
VARS2-206ENST00000473916 DDX46Q7L014 1031 aaKnown RBP21.82■■□□□ 1.08
VARS2-206ENST00000473916 K7ELQ4 463 aaPredicted RBP21.81■■□□□ 1.08
VARS2-206ENST00000473916 USPL1Q5W0Q7 1092 aa21.81■■□□□ 1.08
VARS2-206ENST00000473916 SEC31BQ9NQW1 1179 aa21.81■■□□□ 1.08
VARS2-206ENST00000473916 FOXD4L1Q9NU39 408 aa21.81■■□□□ 1.08
VARS2-206ENST00000473916 ZNF652Q9Y2D9 606 aa21.81■■□□□ 1.08
VARS2-206ENST00000473916 RPS6KA4O75676 772 aa21.8■■□□□ 1.08
VARS2-206ENST00000473916 METTL24Q5JXM2 366 aa21.8■■□□□ 1.08
VARS2-206ENST00000473916 RC3H1Q5TC82 1133 aaKnown RBP21.8■■□□□ 1.08
VARS2-206ENST00000473916 TBC1D9BQ66K14 1250 aa21.8■■□□□ 1.08
VARS2-206ENST00000473916 LRRC4BQ9NT99 713 aa21.8■■□□□ 1.08
VARS2-206ENST00000473916 FBXO3Q9UK99 471 aa21.8■■□□□ 1.08
VARS2-206ENST00000473916 HSPA4P34932 840 aa21.8■■□□□ 1.08
VARS2-206ENST00000473916 CNNM1Q9NRU3 951 aa21.8■■□□□ 1.08
VARS2-206ENST00000473916 CLEC4GQ6UXB4 293 aa21.79■■□□□ 1.08
VARS2-206ENST00000473916 XAGE2Q96GT9 111 aa21.79■■□□□ 1.08
VARS2-206ENST00000473916 MCCP23508 829 aa21.79■■□□□ 1.08
VARS2-206ENST00000473916 SLFNL1Q499Z3 407 aa21.79■■□□□ 1.08
VARS2-206ENST00000473916 C3orf67Q6ZVT6 689 aa21.79■■□□□ 1.08
VARS2-206ENST00000473916 VGLL2Q8N8G2 317 aa21.79■■□□□ 1.08
VARS2-206ENST00000473916 RUFY2Q8WXA3 655 aa21.79■■□□□ 1.08
VARS2-206ENST00000473916 BCL11BQ9C0K0 894 aaPredicted RBP21.79■■□□□ 1.08
VARS2-206ENST00000473916 ERFEQ4G0M1 354 aa21.78■■□□□ 1.08
VARS2-206ENST00000473916 ZNF589Q86UQ0 364 aaPredicted RBP21.78■■□□□ 1.08
VARS2-206ENST00000473916 GOLIM4O00461 696 aa21.77■■□□□ 1.08
VARS2-206ENST00000473916 PHF14O94880 888 aa21.77■■□□□ 1.08
VARS2-206ENST00000473916 KIAA1211Q6ZU35 1233 aa21.77■■□□□ 1.08
VARS2-206ENST00000473916 RASEFQ8IZ41 740 aa21.77■■□□□ 1.08
VARS2-206ENST00000473916 HELBQ8NG08 1087 aaPredicted RBP21.77■■□□□ 1.08
VARS2-206ENST00000473916 AK7Q96M32 723 aa21.77■■□□□ 1.08
VARS2-206ENST00000473916 NARFQ9UHQ1 456 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms