RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 SP8Q8IXZ3 490 aa21.65■■□□□ 1.06
HPS4-210ENST00000473782 RTF1Q92541 710 aaKnown RBP21.65■■□□□ 1.06
HPS4-210ENST00000473782 CSRNP1Q96S65 589 aa21.65■■□□□ 1.06
HPS4-210ENST00000473782 GBA2Q9HCG7 927 aaPredicted RBP21.65■■□□□ 1.06
HPS4-210ENST00000473782 ZBTB12Q9Y330 459 aaPredicted RBP21.65■■□□□ 1.06
HPS4-210ENST00000473782 RRP7AQ9Y3A4 280 aaKnown RBP21.65■■□□□ 1.06
HPS4-210ENST00000473782 CLSPNQ9HAW4 1339 aa21.64■■□□□ 1.05
HPS4-210ENST00000473782 HTATSF1O43719 755 aaKnown RBP21.64■■□□□ 1.05
HPS4-210ENST00000473782 DPP8Q6V1X1 898 aaPredicted RBP21.64■■□□□ 1.05
HPS4-210ENST00000473782 GIGYF2Q6Y7W6 1299 aaKnown RBP21.64■■□□□ 1.05
HPS4-210ENST00000473782 LRP10Q7Z4F1 713 aa21.64■■□□□ 1.05
HPS4-210ENST00000473782 CTU1Q7Z7A3 348 aaKnown RBP21.64■■□□□ 1.05
HPS4-210ENST00000473782 CCDC102AQ96A19 550 aa21.64■■□□□ 1.05
HPS4-210ENST00000473782 NLRP3Q96P20 1036 aa21.64■■□□□ 1.05
HPS4-210ENST00000473782 DUOX1Q9NRD9 1551 aa21.63■■□□□ 1.05
HPS4-210ENST00000473782 MYL6BP14649 208 aa21.63■■□□□ 1.05
HPS4-210ENST00000473782 KIF6Q6ZMV9 814 aa21.63■■□□□ 1.05
HPS4-210ENST00000473782 MPNDQ8N594 471 aa21.63■■□□□ 1.05
HPS4-210ENST00000473782 ADM5C9JUS6 153 aa21.62■■□□□ 1.05
HPS4-210ENST00000473782 BBOX1O75936 387 aa21.62■■□□□ 1.05
HPS4-210ENST00000473782 EIF4A1P60842 406 aaKnown RBP21.62■■□□□ 1.05
HPS4-210ENST00000473782 CNGB1Q14028 1251 aaPredicted RBP21.62■■□□□ 1.05
HPS4-210ENST00000473782 KRT26Q7Z3Y9 468 aa21.62■■□□□ 1.05
HPS4-210ENST00000473782 DPF2Q92785 391 aa21.62■■□□□ 1.05
HPS4-210ENST00000473782 HPS5Q9UPZ3 1129 aa21.62■■□□□ 1.05
HPS4-210ENST00000473782 H7C1D1 291 aa21.61■■□□□ 1.05
HPS4-210ENST00000473782 SLC10A3P09131 477 aa21.61■■□□□ 1.05
HPS4-210ENST00000473782 ZNF157P51786 506 aaPredicted RBP21.61■■□□□ 1.05
HPS4-210ENST00000473782 MKI67P46013 3256 aaKnown RBP21.6■■□□□ 1.05
HPS4-210ENST00000473782 PSMD14O00487 310 aa21.6■■□□□ 1.05
HPS4-210ENST00000473782 TBC1D10BQ4KMP7 808 aaPredicted RBP21.6■■□□□ 1.05
HPS4-210ENST00000473782 PPP1R42Q7Z4L9 355 aa21.6■■□□□ 1.05
HPS4-210ENST00000473782 C2orf69Q8N8R5 385 aa21.6■■□□□ 1.05
HPS4-210ENST00000473782 POLR2AP24928 1970 aaKnown RBP21.59■■□□□ 1.05
HPS4-210ENST00000473782 PARP10Q53GL7 1025 aa21.59■■□□□ 1.05
HPS4-210ENST00000473782 TMX4Q9H1E5 349 aaPredicted RBP21.59■■□□□ 1.05
HPS4-210ENST00000473782 UTP14AQ9BVJ6 771 aaKnown RBP21.58■■□□□ 1.05
HPS4-210ENST00000473782 KCNQ5Q9NR82 932 aa21.58■■□□□ 1.05
HPS4-210ENST00000473782 KDM3BQ7LBC6 1761 aa21.57■■□□□ 1.04
HPS4-210ENST00000473782 U2AF1L5P0DN76 240 aaPredicted RBP21.57■■□□□ 1.04
HPS4-210ENST00000473782 U2AF1Q01081 240 aaKnown RBP eCLIP21.57■■□□□ 1.04
HPS4-210ENST00000473782 PDIA6Q15084 440 aa21.57■■□□□ 1.04
HPS4-210ENST00000473782 HCLS1P14317 486 aaPredicted RBP21.56■■□□□ 1.04
HPS4-210ENST00000473782 LAMB2P55268 1798 aa21.56■■□□□ 1.04
HPS4-210ENST00000473782 ASTN2O75129 1339 aaPredicted RBP21.55■■□□□ 1.04
HPS4-210ENST00000473782 AKAP11Q9UKA4 1901 aa21.55■■□□□ 1.04
HPS4-210ENST00000473782 GRAPQ13588 217 aa21.55■■□□□ 1.04
HPS4-210ENST00000473782 RASAL3Q86YV0 1011 aa21.55■■□□□ 1.04
HPS4-210ENST00000473782 GRAPLQ8TC17 118 aaPredicted RBP21.55■■□□□ 1.04
HPS4-210ENST00000473782 THUMPD2Q9BTF0 503 aaKnown RBP21.55■■□□□ 1.04
HPS4-210ENST00000473782 RTL9Q8NET4 1388 aa21.55■■□□□ 1.04
HPS4-210ENST00000473782 TRIM26Q12899 539 aaPredicted RBP21.54■■□□□ 1.04
HPS4-210ENST00000473782 RBM26Q5T8P6 1007 aaKnown RBP21.54■■□□□ 1.04
HPS4-210ENST00000473782 DBNDD1Q9H9R9 158 aa21.54■■□□□ 1.04
HPS4-210ENST00000473782 TAF1P21675 1872 aa21.54■■□□□ 1.04
HPS4-210ENST00000473782 PROSER3Q2NL68 480 aa21.53■■□□□ 1.04
HPS4-210ENST00000473782 DCPSQ96C86 337 aaKnown RBP21.53■■□□□ 1.04
HPS4-210ENST00000473782 ANKRD36CQ5JPF3 1778 aa21.53■■□□□ 1.04
HPS4-210ENST00000473782 NLRP10Q86W26 655 aa21.52■■□□□ 1.04
HPS4-210ENST00000473782 PNISRQ8TF01 805 aaKnown RBP21.52■■□□□ 1.04
HPS4-210ENST00000473782 ZNF296Q8WUU4 475 aaPredicted RBP21.52■■□□□ 1.04
HPS4-210ENST00000473782 CFAP53Q96M91 514 aa21.52■■□□□ 1.04
HPS4-210ENST00000473782 NUDCQ9Y266 331 aa21.52■■□□□ 1.04
HPS4-210ENST00000473782 HTTP42858 3142 aa21.51■■□□□ 1.03
HPS4-210ENST00000473782 COL4A1P02462 1669 aa21.51■■□□□ 1.03
HPS4-210ENST00000473782 PKN2Q16513 984 aaKnown RBP21.51■■□□□ 1.03
HPS4-210ENST00000473782 CDCA5Q96FF9 252 aa21.51■■□□□ 1.03
HPS4-210ENST00000473782 POLLQ9UGP5 575 aa21.51■■□□□ 1.03
HPS4-210ENST00000473782 LRRC37AA6NMS7 1700 aa21.51■■□□□ 1.03
HPS4-210ENST00000473782 ERBB4Q15303 1308 aa21.51■■□□□ 1.03
HPS4-210ENST00000473782 RPS12P25398 132 aaKnown RBP21.5■■□□□ 1.03
HPS4-210ENST00000473782 WASHC4Q2M389 1173 aa21.5■■□□□ 1.03
HPS4-210ENST00000473782 DDX46Q7L014 1031 aaKnown RBP21.5■■□□□ 1.03
HPS4-210ENST00000473782 GGA3Q9NZ52 723 aa21.5■■□□□ 1.03
HPS4-210ENST00000473782 TBC1D8O95759 1140 aa21.49■■□□□ 1.03
HPS4-210ENST00000473782 ANXA1P04083 346 aa21.49■■□□□ 1.03
HPS4-210ENST00000473782 KIF4BQ2VIQ3 1234 aa21.49■■□□□ 1.03
HPS4-210ENST00000473782 HABP4Q5JVS0 413 aaKnown RBP21.49■■□□□ 1.03
HPS4-210ENST00000473782 REM2Q8IYK8 340 aaPredicted RBP21.49■■□□□ 1.03
HPS4-210ENST00000473782 RIMBP2O15034 1052 aa21.48■■□□□ 1.03
HPS4-210ENST00000473782 PCGF6Q9BYE7 350 aa21.48■■□□□ 1.03
HPS4-210ENST00000473782 ECE2O60344 883 aa21.47■■□□□ 1.03
HPS4-210ENST00000473782 VIL1P09327 827 aaKnown RBP21.47■■□□□ 1.03
HPS4-210ENST00000473782 PPP2R1AP30153 589 aa21.47■■□□□ 1.03
HPS4-210ENST00000473782 DOK7Q18PE1 504 aa21.47■■□□□ 1.03
HPS4-210ENST00000473782 MOB2Q70IA6 237 aa21.47■■□□□ 1.03
HPS4-210ENST00000473782 CELF1Q92879 486 aaKnown RBP21.47■■□□□ 1.03
HPS4-210ENST00000473782 GPSM2P81274 684 aa21.46■■□□□ 1.03
HPS4-210ENST00000473782 TMC4Q7Z404 712 aa21.46■■□□□ 1.03
HPS4-210ENST00000473782 SULF1Q8IWU6 871 aa21.46■■□□□ 1.03
HPS4-210ENST00000473782 NSFL1CQ9UNZ2 370 aaKnown RBP21.46■■□□□ 1.03
HPS4-210ENST00000473782 SCN9AQ15858 1988 aa21.45■■□□□ 1.02
HPS4-210ENST00000473782 GCC1Q96CN9 775 aa21.45■■□□□ 1.02
HPS4-210ENST00000473782 PLEKHF1Q96S99 279 aa21.45■■□□□ 1.02
HPS4-210ENST00000473782 TRMT112Q9UI30 125 aaKnown RBP21.45■■□□□ 1.02
HPS4-210ENST00000473782 BRCA2P51587 3418 aa21.45■■□□□ 1.02
HPS4-210ENST00000473782 DLG5Q8TDM6 1919 aa21.45■■□□□ 1.02
HPS4-210ENST00000473782 TCIRG1Q13488 830 aa21.44■■□□□ 1.02
HPS4-210ENST00000473782 ANGEL2Q5VTE6 544 aaKnown RBP21.44■■□□□ 1.02
HPS4-210ENST00000473782 FBXO46Q6PJ61 603 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms