RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 CNTROBQ8N137 903 aa9.17□□□□□ -0.94
CKS1B-205ENST00000473344 NBPF15Q8N660 670 aa9.17□□□□□ -0.94
CKS1B-205ENST00000473344 RPGRQ92834 1020 aaKnown RBP9.17□□□□□ -0.94
CKS1B-205ENST00000473344 TMX4Q9H1E5 349 aaPredicted RBP9.17□□□□□ -0.94
CKS1B-205ENST00000473344 CIZ1Q9ULV3 898 aaPredicted RBP9.17□□□□□ -0.94
CKS1B-205ENST00000473344 ABT1Q9ULW3 272 aaKnown RBP9.17□□□□□ -0.94
CKS1B-205ENST00000473344 GJA3Q9Y6H8 435 aa9.17□□□□□ -0.94
CKS1B-205ENST00000473344 DICER1Q9UPY3 1922 aaKnown RBP9.17□□□□□ -0.94
CKS1B-205ENST00000473344 FZD9O00144 591 aa9.16□□□□□ -0.94
CKS1B-205ENST00000473344 CC2D2BQ6DHV5 1058 aa9.16□□□□□ -0.94
CKS1B-205ENST00000473344 PNISRQ8TF01 805 aaKnown RBP9.16□□□□□ -0.94
CKS1B-205ENST00000473344 PSMD1Q99460 953 aa9.16□□□□□ -0.94
CKS1B-205ENST00000473344 CACNA1SQ13698 1873 aa9.16□□□□□ -0.94
CKS1B-205ENST00000473344 ARFGEF2Q9Y6D5 1785 aa9.16□□□□□ -0.94
CKS1B-205ENST00000473344 SCN4AP35499 1836 aa9.15□□□□□ -0.94
CKS1B-205ENST00000473344 RASSF10A6NK89 507 aa9.15□□□□□ -0.94
CKS1B-205ENST00000473344 ERVV-1B6SEH8 477 aa9.15□□□□□ -0.94
CKS1B-205ENST00000473344 MYL6BP14649 208 aa9.15□□□□□ -0.94
CKS1B-205ENST00000473344 PPP2R1AP30153 589 aa9.15□□□□□ -0.94
CKS1B-205ENST00000473344 LBX1P52954 281 aa9.15□□□□□ -0.94
CKS1B-205ENST00000473344 MAP2K1Q02750 393 aaPredicted RBP9.15□□□□□ -0.94
CKS1B-205ENST00000473344 GRIPAP1Q4V328 841 aa9.15□□□□□ -0.94
CKS1B-205ENST00000473344 PAXIP1Q6ZW49 1069 aaPredicted RBP9.15□□□□□ -0.94
CKS1B-205ENST00000473344 NUTM1Q86Y26 1132 aa9.15□□□□□ -0.94
CKS1B-205ENST00000473344 IFNLR1Q8IU57 520 aaPredicted RBP9.15□□□□□ -0.94
CKS1B-205ENST00000473344 LARGE2Q8N3Y3 721 aa9.15□□□□□ -0.94
CKS1B-205ENST00000473344 BEGAINQ9BUH8 593 aa9.15□□□□□ -0.94
CKS1B-205ENST00000473344 MIS18AQ9NYP9 233 aa9.15□□□□□ -0.94
CKS1B-205ENST00000473344 RRP7AQ9Y3A4 280 aaKnown RBP9.15□□□□□ -0.94
CKS1B-205ENST00000473344 MAP3K15Q6ZN16 1313 aa9.14□□□□□ -0.95
CKS1B-205ENST00000473344 WDR33Q9C0J8 1336 aaKnown RBP9.14□□□□□ -0.95
CKS1B-205ENST00000473344 TCERG1O14776 1098 aaKnown RBP9.14□□□□□ -0.95
CKS1B-205ENST00000473344 GPTP24298 496 aa9.14□□□□□ -0.95
CKS1B-205ENST00000473344 CRY2Q49AN0 593 aa9.14□□□□□ -0.95
CKS1B-205ENST00000473344 RBM17Q96I25 401 aaKnown RBP9.14□□□□□ -0.95
CKS1B-205ENST00000473344 WBP1LQ9NX94 342 aa9.14□□□□□ -0.95
CKS1B-205ENST00000473344 PPEF1O14829 653 aaPredicted RBP9.13□□□□□ -0.95
CKS1B-205ENST00000473344 ECE1P42892 770 aa9.13□□□□□ -0.95
CKS1B-205ENST00000473344 EMP3P54852 163 aa9.13□□□□□ -0.95
CKS1B-205ENST00000473344 GRM1Q13255 1194 aa9.13□□□□□ -0.95
CKS1B-205ENST00000473344 NIM1KQ8IY84 436 aa9.13□□□□□ -0.95
CKS1B-205ENST00000473344 ZBTB3Q9H5J0 574 aa9.13□□□□□ -0.95
CKS1B-205ENST00000473344 DDX21Q9NR30 783 aaKnown RBP eCLIP9.13□□□□□ -0.95
CKS1B-205ENST00000473344 ABCC12Q96J65 1359 aa9.12□□□□□ -0.95
CKS1B-205ENST00000473344 HOXA10P31260 410 aaPredicted RBP9.12□□□□□ -0.95
CKS1B-205ENST00000473344 TTLL7Q6ZT98 887 aa9.12□□□□□ -0.95
CKS1B-205ENST00000473344 USP50Q70EL3 339 aaPredicted RBP9.12□□□□□ -0.95
CKS1B-205ENST00000473344 PPP1R42Q7Z4L9 355 aa9.12□□□□□ -0.95
CKS1B-205ENST00000473344 NLRP3Q96P20 1036 aa9.12□□□□□ -0.95
CKS1B-205ENST00000473344 PNNQ9H307 717 aaKnown RBP9.12□□□□□ -0.95
CKS1B-205ENST00000473344 MAPK8IP3Q9UPT6 1336 aa9.11□□□□□ -0.95
CKS1B-205ENST00000473344 PPIP5K2O43314 1243 aa9.11□□□□□ -0.95
CKS1B-205ENST00000473344 HSPA8P11142 646 aaKnown RBP9.11□□□□□ -0.95
CKS1B-205ENST00000473344 EPS15P42566 896 aa9.11□□□□□ -0.95
CKS1B-205ENST00000473344 SCNN1DP51172 638 aa9.11□□□□□ -0.95
CKS1B-205ENST00000473344 EIF4A1P60842 406 aaKnown RBP9.11□□□□□ -0.95
CKS1B-205ENST00000473344 SUSD4Q5VX71 490 aa9.11□□□□□ -0.95
CKS1B-205ENST00000473344 SPNS2Q8IVW8 549 aa9.11□□□□□ -0.95
CKS1B-205ENST00000473344 MARVELD3Q96A59 401 aa9.11□□□□□ -0.95
CKS1B-205ENST00000473344 CRAMP1Q96RY5 1269 aa9.11□□□□□ -0.95
CKS1B-205ENST00000473344 BOLA1Q9Y3E2 137 aa9.11□□□□□ -0.95
CKS1B-205ENST00000473344 IBTKQ9P2D0 1353 aaPredicted RBP9.11□□□□□ -0.95
CKS1B-205ENST00000473344 UBN2Q6ZU65 1347 aa9.1□□□□□ -0.95
CKS1B-205ENST00000473344 ADAMTSL1Q8N6G6 1762 aa9.1□□□□□ -0.95
CKS1B-205ENST00000473344 MMRN1Q13201 1228 aa9.1□□□□□ -0.95
CKS1B-205ENST00000473344 AOC3Q16853 763 aa9.1□□□□□ -0.95
CKS1B-205ENST00000473344 PARP10Q53GL7 1025 aa9.1□□□□□ -0.95
CKS1B-205ENST00000473344 CYP4F22Q6NT55 531 aa9.1□□□□□ -0.95
CKS1B-205ENST00000473344 GIGYF2Q6Y7W6 1299 aaKnown RBP9.1□□□□□ -0.95
CKS1B-205ENST00000473344 SUPT20HQ8NEM7 779 aa9.1□□□□□ -0.95
CKS1B-205ENST00000473344 ABHD8Q96I13 439 aa9.1□□□□□ -0.95
CKS1B-205ENST00000473344 CAPNS2Q96L46 248 aa9.1□□□□□ -0.95
CKS1B-205ENST00000473344 GPR101Q96P66 508 aaPredicted RBP9.1□□□□□ -0.95
CKS1B-205ENST00000473344 VPS33BQ9H267 617 aa9.1□□□□□ -0.95
CKS1B-205ENST00000473344 ADARB2Q9NS39 739 aaKnown RBP9.1□□□□□ -0.95
CKS1B-205ENST00000473344 RIC1Q4ADV7 1423 aa9.1□□□□□ -0.95
CKS1B-205ENST00000473344 SNED1Q8TER0 1413 aa9.1□□□□□ -0.95
CKS1B-205ENST00000473344 LAMB4A4D0S4 1761 aa9.09□□□□□ -0.95
CKS1B-205ENST00000473344 ERBB4Q15303 1308 aa9.09□□□□□ -0.95
CKS1B-205ENST00000473344 TRAF5O00463 557 aa9.09□□□□□ -0.95
CKS1B-205ENST00000473344 NTSR2O95665 410 aa9.09□□□□□ -0.95
CKS1B-205ENST00000473344 EIF2S2P20042 333 aaKnown RBP9.09□□□□□ -0.95
CKS1B-205ENST00000473344 NFE2L2Q16236 605 aa9.09□□□□□ -0.95
CKS1B-205ENST00000473344 DPP8Q6V1X1 898 aaPredicted RBP9.09□□□□□ -0.95
CKS1B-205ENST00000473344 ZNF34Q8IZ26 560 aa9.09□□□□□ -0.95
CKS1B-205ENST00000473344 THUMPD2Q9BTF0 503 aaKnown RBP9.09□□□□□ -0.95
CKS1B-205ENST00000473344 UTP14AQ9BVJ6 771 aaKnown RBP9.09□□□□□ -0.95
CKS1B-205ENST00000473344 TSPYL4Q9UJ04 414 aa9.09□□□□□ -0.95
CKS1B-205ENST00000473344 ZNRF3Q9ULT6 936 aa9.09□□□□□ -0.95
CKS1B-205ENST00000473344 ATP6V0A2Q9Y487 856 aa9.09□□□□□ -0.95
CKS1B-205ENST00000473344 CCDC85CA6NKD9 419 aa9.08□□□□□ -0.96
CKS1B-205ENST00000473344 FMR1Q06787 632 aaKnown RBP eCLIP9.08□□□□□ -0.96
CKS1B-205ENST00000473344 CST9Q5W186 159 aa9.08□□□□□ -0.96
CKS1B-205ENST00000473344 BCL2L13Q9BXK5 485 aa9.08□□□□□ -0.96
CKS1B-205ENST00000473344 GPRC5DQ9NZD1 345 aa9.08□□□□□ -0.96
CKS1B-205ENST00000473344 TLL2Q9Y6L7 1015 aa9.08□□□□□ -0.96
CKS1B-205ENST00000473344 COL4A5P29400 1685 aa9.07□□□□□ -0.96
CKS1B-205ENST00000473344 BBOX1O75936 387 aa9.07□□□□□ -0.96
CKS1B-205ENST00000473344 CELF2O95319 508 aaKnown RBP9.07□□□□□ -0.96
CKS1B-205ENST00000473344 MAP2K2P36507 400 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms