RNA–Protein interactions for RNA: ENST00000473343.5

TNFRSF25-211, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 1,591 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-211ENST00000473343 NRXN2Q9P2S2 1712 aa23.57■■□□□ 1.36
TNFRSF25-211ENST00000473343 ZBTB7AO95365 584 aa23.57■■□□□ 1.36
TNFRSF25-211ENST00000473343 NLRP3Q96P20 1036 aa23.57■■□□□ 1.36
TNFRSF25-211ENST00000473343 SF3B3Q15393 1217 aaKnown RBP23.57■■□□□ 1.36
TNFRSF25-211ENST00000473343 FAM161AQ3B820 660 aa23.57■■□□□ 1.36
TNFRSF25-211ENST00000473343 C3orf67Q6ZVT6 689 aa23.57■■□□□ 1.36
TNFRSF25-211ENST00000473343 CENPQQ7L2Z9 268 aaPredicted RBP23.57■■□□□ 1.36
TNFRSF25-211ENST00000473343 RFX5P48382 616 aaPredicted RBP23.56■■□□□ 1.36
TNFRSF25-211ENST00000473343 CCDC152Q4G0S7 254 aa23.56■■□□□ 1.36
TNFRSF25-211ENST00000473343 CCDC85AQ96PX6 553 aaPredicted RBP23.56■■□□□ 1.36
TNFRSF25-211ENST00000473343 GREM2Q9H772 168 aa23.56■■□□□ 1.36
TNFRSF25-211ENST00000473343 DCTPP1Q9H773 170 aa23.56■■□□□ 1.36
TNFRSF25-211ENST00000473343 IFIT5Q13325 482 aaKnown RBP23.54■■□□□ 1.36
TNFRSF25-211ENST00000473343 CCDC57Q2TAC2 916 aa23.54■■□□□ 1.36
TNFRSF25-211ENST00000473343 RTL9Q8NET4 1388 aa23.54■■□□□ 1.36
TNFRSF25-211ENST00000473343 ITGA6P23229 1130 aa23.53■■□□□ 1.36
TNFRSF25-211ENST00000473343 SMC5Q8IY18 1101 aa23.53■■□□□ 1.36
TNFRSF25-211ENST00000473343 GCC1Q96CN9 775 aa23.53■■□□□ 1.36
TNFRSF25-211ENST00000473343 BRIP1Q9BX63 1249 aa23.53■■□□□ 1.36
TNFRSF25-211ENST00000473343 PTPN12Q05209 780 aaKnown RBP23.52■■□□□ 1.36
TNFRSF25-211ENST00000473343 COPRSQ9NQ92 184 aa23.52■■□□□ 1.36
TNFRSF25-211ENST00000473343 NOP58Q9Y2X3 529 aaKnown RBP23.52■■□□□ 1.36
TNFRSF25-211ENST00000473343 MYH3P11055 1940 aa23.52■■□□□ 1.36
TNFRSF25-211ENST00000473343 KLHDC4Q8TBB5 520 aa23.52■■□□□ 1.36
TNFRSF25-211ENST00000473343 PA2G4Q9UQ80 394 aaKnown RBP23.52■■□□□ 1.36
TNFRSF25-211ENST00000473343 ATF5Q9Y2D1 282 aaPredicted RBP23.52■■□□□ 1.36
TNFRSF25-211ENST00000473343 TNRC6CQ9HCJ0 1690 aaKnown RBP23.51■■□□□ 1.35
TNFRSF25-211ENST00000473343 ANKRD18BA2A2Z9 1011 aa23.51■■□□□ 1.35
TNFRSF25-211ENST00000473343 KLRG2A4D1S0 409 aaPredicted RBP23.51■■□□□ 1.35
TNFRSF25-211ENST00000473343 SURF6O75683 361 aaKnown RBP23.51■■□□□ 1.35
TNFRSF25-211ENST00000473343 CRY2Q49AN0 593 aa23.51■■□□□ 1.35
TNFRSF25-211ENST00000473343 EXOC6BQ9Y2D4 811 aa23.5■■□□□ 1.35
TNFRSF25-211ENST00000473343 POLD1P28340 1107 aa23.49■■□□□ 1.35
TNFRSF25-211ENST00000473343 SOCS7O14512 581 aa23.48■■□□□ 1.35
TNFRSF25-211ENST00000473343 ZNF594Q96JF6 807 aaPredicted RBP23.48■■□□□ 1.35
TNFRSF25-211ENST00000473343 SEC31BQ9NQW1 1179 aa23.48■■□□□ 1.35
TNFRSF25-211ENST00000473343 PDE6BP35913 854 aa23.48■■□□□ 1.35
TNFRSF25-211ENST00000473343 HSP90AB4PQ58FF6 505 aa23.48■■□□□ 1.35
TNFRSF25-211ENST00000473343 TAF7LQ5H9L4 462 aa23.48■■□□□ 1.35
TNFRSF25-211ENST00000473343 SGIP1Q9BQI5 828 aa23.48■■□□□ 1.35
TNFRSF25-211ENST00000473343 SIL1Q9H173 461 aa23.47■■□□□ 1.35
TNFRSF25-211ENST00000473343 RAB11FIP3O75154 756 aa23.46■■□□□ 1.35
TNFRSF25-211ENST00000473343 G3BP1Q13283 466 aaKnown RBP eCLIP23.46■■□□□ 1.35
TNFRSF25-211ENST00000473343 CDC5LQ99459 802 aaKnown RBP23.46■■□□□ 1.35
TNFRSF25-211ENST00000473343 FBXO3Q9UK99 471 aa23.46■■□□□ 1.35
TNFRSF25-211ENST00000473343 C10orf71Q711Q0 1435 aa23.45■■□□□ 1.35
TNFRSF25-211ENST00000473343 DDX46Q7L014 1031 aaKnown RBP23.45■■□□□ 1.34
TNFRSF25-211ENST00000473343 RPGRQ92834 1020 aaKnown RBP23.45■■□□□ 1.34
TNFRSF25-211ENST00000473343 ANKRD31Q8N7Z5 1873 aa23.45■■□□□ 1.34
TNFRSF25-211ENST00000473343 EYA2O00167 538 aa23.44■■□□□ 1.34
TNFRSF25-211ENST00000473343 CIAO1O76071 339 aa23.44■■□□□ 1.34
TNFRSF25-211ENST00000473343 HOXA10P31260 410 aaPredicted RBP23.44■■□□□ 1.34
TNFRSF25-211ENST00000473343 PTGER2P43116 358 aa23.44■■□□□ 1.34
TNFRSF25-211ENST00000473343 OS9Q13438 667 aaPredicted RBP23.44■■□□□ 1.34
TNFRSF25-211ENST00000473343 NUCB1Q02818 461 aa23.44■■□□□ 1.34
TNFRSF25-211ENST00000473343 LDHAL6AQ6ZMR3 332 aa23.44■■□□□ 1.34
TNFRSF25-211ENST00000473343 ERC1Q8IUD2 1116 aa23.44■■□□□ 1.34
TNFRSF25-211ENST00000473343 APBB1O00213 710 aa23.43■■□□□ 1.34
TNFRSF25-211ENST00000473343 SRGNP10124 158 aa23.43■■□□□ 1.34
TNFRSF25-211ENST00000473343 IGHMBP2P38935 993 aaKnown RBP23.43■■□□□ 1.34
TNFRSF25-211ENST00000473343 LRRC24Q50LG9 513 aa23.43■■□□□ 1.34
TNFRSF25-211ENST00000473343 ANKRD45Q5TZF3 282 aa23.43■■□□□ 1.34
TNFRSF25-211ENST00000473343 ATG9AQ7Z3C6 839 aa23.43■■□□□ 1.34
TNFRSF25-211ENST00000473343 ANKRD18AQ8IVF6 992 aa23.43■■□□□ 1.34
TNFRSF25-211ENST00000473343 CELF1Q92879 486 aaKnown RBP23.43■■□□□ 1.34
TNFRSF25-211ENST00000473343 RBM17Q96I25 401 aaKnown RBP23.43■■□□□ 1.34
TNFRSF25-211ENST00000473343 PUS3Q9BZE2 481 aaKnown RBP23.43■■□□□ 1.34
TNFRSF25-211ENST00000473343 LRP5O75197 1615 aa23.42■■□□□ 1.34
TNFRSF25-211ENST00000473343 IL15P40933 162 aaPredicted RBP23.42■■□□□ 1.34
TNFRSF25-211ENST00000473343 RHPN1Q8TCX5 695 aa23.42■■□□□ 1.34
TNFRSF25-211ENST00000473343 LRRCC1Q9C099 1032 aa23.42■■□□□ 1.34
TNFRSF25-211ENST00000473343 PDZRN3Q9UPQ7 1066 aa23.42■■□□□ 1.34
TNFRSF25-211ENST00000473343 SASH1O94885 1247 aa23.41■■□□□ 1.34
TNFRSF25-211ENST00000473343 RPS8P62241 208 aaKnown RBP23.41■■□□□ 1.34
TNFRSF25-211ENST00000473343 GRAPQ13588 217 aa23.41■■□□□ 1.34
TNFRSF25-211ENST00000473343 GRAPLQ8TC17 118 aaPredicted RBP23.41■■□□□ 1.34
TNFRSF25-211ENST00000473343 KIF1BPQ96EK5 621 aa23.41■■□□□ 1.34
TNFRSF25-211ENST00000473343 MPHOSPH8Q99549 860 aa23.41■■□□□ 1.34
TNFRSF25-211ENST00000473343 RIPOR2Q9Y4F9 1068 aa23.41■■□□□ 1.34
TNFRSF25-211ENST00000473343 COL4A1P02462 1669 aa23.41■■□□□ 1.34
TNFRSF25-211ENST00000473343 NPR1P16066 1061 aa23.4■■□□□ 1.34
TNFRSF25-211ENST00000473343 CHD1LQ86WJ1 897 aa23.4■■□□□ 1.34
TNFRSF25-211ENST00000473343 C2CD5Q86YS7 1000 aa23.4■■□□□ 1.34
TNFRSF25-211ENST00000473343 CRAMP1Q96RY5 1269 aa23.4■■□□□ 1.34
TNFRSF25-211ENST00000473343 SPON1Q9HCB6 807 aa23.4■■□□□ 1.34
TNFRSF25-211ENST00000473343 CNNM1Q9NRU3 951 aa23.4■■□□□ 1.34
TNFRSF25-211ENST00000473343 H0YIN7 160 aa23.4■■□□□ 1.34
TNFRSF25-211ENST00000473343 MASTLQ96GX5 879 aa23.4■■□□□ 1.34
TNFRSF25-211ENST00000473343 BSDC1Q9NW68 430 aaPredicted RBP23.4■■□□□ 1.34
TNFRSF25-211ENST00000473343 SMARCA5O60264 1052 aaPredicted RBP23.39■■□□□ 1.33
TNFRSF25-211ENST00000473343 LNPKQ9C0E8 428 aa23.38■■□□□ 1.33
TNFRSF25-211ENST00000473343 ZBTB47Q9UFB7 747 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF25-211ENST00000473343 STYK1Q6J9G0 422 aa23.37■■□□□ 1.33
TNFRSF25-211ENST00000473343 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF25-211ENST00000473343 COL11A2P13942 1736 aaPredicted RBP23.37■■□□□ 1.33
TNFRSF25-211ENST00000473343 BBOX1O75936 387 aa23.36■■□□□ 1.33
TNFRSF25-211ENST00000473343 CHRNA5P30532 468 aa23.36■■□□□ 1.33
TNFRSF25-211ENST00000473343 TFCP2Q12800 502 aa23.36■■□□□ 1.33
TNFRSF25-211ENST00000473343 IL1RAPL2Q9NP60 686 aa23.36■■□□□ 1.33
TNFRSF25-211ENST00000473343 MROH5Q6ZUA9 1318 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms