RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 DDX56Q9NY93 547 aaKnown RBP7.77□□□□□ -1.17
RTF1-203ENST00000473214 PRC1O43663 620 aa7.76□□□□□ -1.17
RTF1-203ENST00000473214 ABL1P00519 1130 aa7.76□□□□□ -1.17
RTF1-203ENST00000473214 SCNN1AP37088 669 aa7.76□□□□□ -1.17
RTF1-203ENST00000473214 POU4F2Q12837 409 aa7.76□□□□□ -1.17
RTF1-203ENST00000473214 GTPBP3Q969Y2 492 aaKnown RBP7.76□□□□□ -1.17
RTF1-203ENST00000473214 GRIP2Q9C0E4 1043 aa7.76□□□□□ -1.17
RTF1-203ENST00000473214 CCDC88BA6NC98 1476 aa7.75□□□□□ -1.17
RTF1-203ENST00000473214 H3BRB1 525 aa7.75□□□□□ -1.17
RTF1-203ENST00000473214 DNAJC6O75061 913 aa7.75□□□□□ -1.17
RTF1-203ENST00000473214 FBXO45P0C2W1 286 aa7.75□□□□□ -1.17
RTF1-203ENST00000473214 BAG6P46379 1132 aa7.75□□□□□ -1.17
RTF1-203ENST00000473214 RBL2Q08999 1139 aa7.75□□□□□ -1.17
RTF1-203ENST00000473214 WDR44Q5JSH3 913 aa7.75□□□□□ -1.17
RTF1-203ENST00000473214 NBPF10Q6P3W6 841 aaKnown RBP7.75□□□□□ -1.17
RTF1-203ENST00000473214 RPUSD2Q8IZ73 545 aaKnown RBP7.75□□□□□ -1.17
RTF1-203ENST00000473214 Q8N3U1 123 aa7.75□□□□□ -1.17
RTF1-203ENST00000473214 NBPF15Q8N660 670 aa7.75□□□□□ -1.17
RTF1-203ENST00000473214 JDP2Q8WYK2 163 aa7.75□□□□□ -1.17
RTF1-203ENST00000473214 ACBD3Q9H3P7 528 aa7.75□□□□□ -1.17
RTF1-203ENST00000473214 TUT1Q9H6E5 874 aaKnown RBP7.75□□□□□ -1.17
RTF1-203ENST00000473214 SPC25Q9HBM1 224 aa7.75□□□□□ -1.17
RTF1-203ENST00000473214 PCDHB9Q9Y5E1 797 aa7.75□□□□□ -1.17
RTF1-203ENST00000473214 KRBA1A5PL33 1030 aa7.74□□□□□ -1.17
RTF1-203ENST00000473214 SPATA31C2B4DYI2 1134 aa7.74□□□□□ -1.17
RTF1-203ENST00000473214 LIG1P18858 919 aa7.74□□□□□ -1.17
RTF1-203ENST00000473214 CLN3Q13286 438 aa7.74□□□□□ -1.17
RTF1-203ENST00000473214 COL19A1Q14993 1142 aa7.74□□□□□ -1.17
RTF1-203ENST00000473214 LDLRAD1Q5T700 205 aa7.74□□□□□ -1.17
RTF1-203ENST00000473214 CLP1Q92989 425 aaKnown RBP7.74□□□□□ -1.17
RTF1-203ENST00000473214 TRERF1Q96PN7 1200 aa7.74□□□□□ -1.17
RTF1-203ENST00000473214 GAS2L1Q99501 681 aaPredicted RBP7.74□□□□□ -1.17
RTF1-203ENST00000473214 BSDC1Q9NW68 430 aaPredicted RBP7.74□□□□□ -1.17
RTF1-203ENST00000473214 OIP5O43482 229 aa7.73□□□□□ -1.17
RTF1-203ENST00000473214 MX2P20592 715 aa7.73□□□□□ -1.17
RTF1-203ENST00000473214 TNNI2P48788 182 aa7.73□□□□□ -1.17
RTF1-203ENST00000473214 SNRPNP63162 240 aaKnown RBP7.73□□□□□ -1.17
RTF1-203ENST00000473214 ZNF211Q13398 564 aaPredicted RBP7.73□□□□□ -1.17
RTF1-203ENST00000473214 SLC27A3Q5K4L6 730 aa7.73□□□□□ -1.17
RTF1-203ENST00000473214 RNF20Q5VTR2 975 aa7.73□□□□□ -1.17
RTF1-203ENST00000473214 RNF34Q969K3 372 aa7.73□□□□□ -1.17
RTF1-203ENST00000473214 NLRP3Q96P20 1036 aa7.73□□□□□ -1.17
RTF1-203ENST00000473214 DCTN4Q9UJW0 460 aa7.73□□□□□ -1.17
RTF1-203ENST00000473214 CCDC189A1A4V9 331 aa7.72□□□□□ -1.17
RTF1-203ENST00000473214 EXOC5O00471 708 aa7.72□□□□□ -1.17
RTF1-203ENST00000473214 SCTRP47872 440 aa7.72□□□□□ -1.17
RTF1-203ENST00000473214 XPCQ01831 940 aaPredicted RBP7.72□□□□□ -1.17
RTF1-203ENST00000473214 CYP2U1Q7Z449 544 aa7.72□□□□□ -1.17
RTF1-203ENST00000473214 GLYCTKQ8IVS8 523 aa7.72□□□□□ -1.17
RTF1-203ENST00000473214 CHMP7Q8WUX9 453 aaPredicted RBP7.72□□□□□ -1.17
RTF1-203ENST00000473214 STAG1Q8WVM7 1258 aa7.72□□□□□ -1.17
RTF1-203ENST00000473214 MRFAP1L1Q96HT8 127 aa7.72□□□□□ -1.17
RTF1-203ENST00000473214 GMLQ99445 158 aa7.72□□□□□ -1.17
RTF1-203ENST00000473214 TMX4Q9H1E5 349 aaPredicted RBP7.72□□□□□ -1.17
RTF1-203ENST00000473214 ANO2Q9NQ90 1003 aa7.72□□□□□ -1.17
RTF1-203ENST00000473214 TCEAL9Q9UHQ7 104 aa7.72□□□□□ -1.17
RTF1-203ENST00000473214 NSFL1CQ9UNZ2 370 aaKnown RBP7.72□□□□□ -1.17
RTF1-203ENST00000473214 HECW2Q9P2P5 1572 aa7.71□□□□□ -1.17
RTF1-203ENST00000473214 SYNJ2O15056 1496 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 MAGI1Q96QZ7 1491 aaPredicted RBP7.71□□□□□ -1.18
RTF1-203ENST00000473214 USP17L15C9J2P7 530 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 USP17L10C9JJH3 530 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 USP17L13C9JLJ4 530 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 USP17L12C9JPN9 530 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 USP17L11C9JVI0 530 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 USP17L21D6R901 530 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 USP17L18D6R9N7 530 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 USP17L22D6RA61 530 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 USP17L17D6RBQ6 530 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 USP17L19D6RCP7 530 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 USP17L20D6RJB6 530 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 F11P03951 625 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 FURINP09958 794 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 ARID5AQ03989 594 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 USP17L24Q0WX57 530 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 ENOX2Q16206 610 aaKnown RBP7.71□□□□□ -1.18
RTF1-203ENST00000473214 AMOTL1Q8IY63 956 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 PRPF38AQ8NAV1 312 aaKnown RBP7.71□□□□□ -1.18
RTF1-203ENST00000473214 FAM200AQ8TCP9 573 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 SCYL1Q96KG9 808 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 SENP7Q9BQF6 1050 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 NUCKS1Q9H1E3 243 aaKnown RBP7.71□□□□□ -1.18
RTF1-203ENST00000473214 ABCC8Q09428 1581 aa7.71□□□□□ -1.18
RTF1-203ENST00000473214 SOGA1O94964 1423 aa7.7□□□□□ -1.18
RTF1-203ENST00000473214 WASLO00401 505 aaPredicted RBP7.7□□□□□ -1.18
RTF1-203ENST00000473214 ANP32CO43423 234 aa7.7□□□□□ -1.18
RTF1-203ENST00000473214 STK10O94804 968 aaKnown RBP7.7□□□□□ -1.18
RTF1-203ENST00000473214 THBS1P07996 1170 aa7.7□□□□□ -1.18
RTF1-203ENST00000473214 GYS2P54840 703 aa7.7□□□□□ -1.18
RTF1-203ENST00000473214 FAM69CQ0P6D2 419 aa7.7□□□□□ -1.18
RTF1-203ENST00000473214 MYBPC2Q14324 1141 aa7.7□□□□□ -1.18
RTF1-203ENST00000473214 TAS1R3Q7RTX0 852 aa7.7□□□□□ -1.18
RTF1-203ENST00000473214 CCDC85AQ96PX6 553 aaPredicted RBP7.7□□□□□ -1.18
RTF1-203ENST00000473214 PSMG3-AS1Q96PY0 264 aa7.7□□□□□ -1.18
RTF1-203ENST00000473214 OSBPL3Q9H4L5 887 aa7.7□□□□□ -1.18
RTF1-203ENST00000473214 MRS2Q9HD23 443 aa7.7□□□□□ -1.18
RTF1-203ENST00000473214 TIMMDC1Q9NPL8 285 aa7.7□□□□□ -1.18
RTF1-203ENST00000473214 EGFL7Q9UHF1 273 aa7.7□□□□□ -1.18
RTF1-203ENST00000473214 FBXO9Q9UK97 447 aaPredicted RBP7.7□□□□□ -1.18
RTF1-203ENST00000473214 CEP170Q5SW79 1584 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms