RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 PDE6BP35913 854 aa8.39□□□□□ -1.07
HDAC1-205ENST00000472928 AKAP4Q5JQC9 854 aa8.39□□□□□ -1.07
HDAC1-205ENST00000472928 SULT6B1Q6IMI4 303 aa8.39□□□□□ -1.07
HDAC1-205ENST00000472928 PRPF40BQ6NWY9 871 aaKnown RBP8.39□□□□□ -1.07
HDAC1-205ENST00000472928 ERICH6Q7L0X2 663 aa8.39□□□□□ -1.07
HDAC1-205ENST00000472928 SCN7AQ01118 1682 aa8.38□□□□□ -1.07
HDAC1-205ENST00000472928 CCDC85CA6NKD9 419 aa8.38□□□□□ -1.07
HDAC1-205ENST00000472928 SRGNP10124 158 aa8.38□□□□□ -1.07
HDAC1-205ENST00000472928 CANXP27824 592 aaKnown RBP8.38□□□□□ -1.07
HDAC1-205ENST00000472928 MAP2K1Q02750 393 aaPredicted RBP8.38□□□□□ -1.07
HDAC1-205ENST00000472928 PDE4DQ08499 809 aa8.38□□□□□ -1.07
HDAC1-205ENST00000472928 DEFB115Q30KQ5 88 aa8.38□□□□□ -1.07
HDAC1-205ENST00000472928 EAPPQ56P03 285 aaPredicted RBP8.38□□□□□ -1.07
HDAC1-205ENST00000472928 MAP1SQ66K74 1059 aaPredicted RBP8.38□□□□□ -1.07
HDAC1-205ENST00000472928 STYK1Q6J9G0 422 aa8.38□□□□□ -1.07
HDAC1-205ENST00000472928 CNKSR1Q969H4 720 aa8.38□□□□□ -1.07
HDAC1-205ENST00000472928 THSD7BQ9C0I4 1608 aa8.38□□□□□ -1.07
HDAC1-205ENST00000472928 ZBED9Q6R2W3 1325 aa8.37□□□□□ -1.07
HDAC1-205ENST00000472928 A0A087WZG4 1122 aa8.37□□□□□ -1.07
HDAC1-205ENST00000472928 EPHX2P34913 555 aa8.37□□□□□ -1.07
HDAC1-205ENST00000472928 IL13P35225 146 aa8.37□□□□□ -1.07
HDAC1-205ENST00000472928 MAP2K5Q13163 448 aa8.37□□□□□ -1.07
HDAC1-205ENST00000472928 CNTROBQ8N137 903 aa8.37□□□□□ -1.07
HDAC1-205ENST00000472928 KDM4CQ9H3R0 1056 aa8.37□□□□□ -1.07
HDAC1-205ENST00000472928 ZNF277Q9NRM2 450 aaPredicted RBP8.37□□□□□ -1.07
HDAC1-205ENST00000472928 HACL1Q9UJ83 578 aa8.37□□□□□ -1.07
HDAC1-205ENST00000472928 UBR2Q8IWV8 1755 aa8.37□□□□□ -1.07
HDAC1-205ENST00000472928 RNF123Q5XPI4 1314 aa8.36□□□□□ -1.07
HDAC1-205ENST00000472928 ARFGEF2Q9Y6D5 1785 aa8.36□□□□□ -1.07
HDAC1-205ENST00000472928 CAMTA2O94983 1202 aa8.36□□□□□ -1.07
HDAC1-205ENST00000472928 FMR1Q06787 632 aaKnown RBP eCLIP8.36□□□□□ -1.078e-8■□□□□ 9.2
HDAC1-205ENST00000472928 HIC1Q14526 733 aa8.36□□□□□ -1.07
HDAC1-205ENST00000472928 SOGA3Q5TF21 947 aa8.36□□□□□ -1.07
HDAC1-205ENST00000472928 OLFM4Q6UX06 510 aa8.36□□□□□ -1.07
HDAC1-205ENST00000472928 CNBD1Q8NA66 436 aa8.36□□□□□ -1.07
HDAC1-205ENST00000472928 MASTLQ96GX5 879 aa8.36□□□□□ -1.07
HDAC1-205ENST00000472928 TBC1D2BQ9UPU7 963 aa8.36□□□□□ -1.07
HDAC1-205ENST00000472928 CACNA1SQ13698 1873 aa8.35□□□□□ -1.07
HDAC1-205ENST00000472928 STARD3NLO95772 234 aa8.35□□□□□ -1.07
HDAC1-205ENST00000472928 FKBP4Q02790 459 aaKnown RBP eCLIP8.35□□□□□ -1.07
HDAC1-205ENST00000472928 CCDC93Q567U6 631 aa8.35□□□□□ -1.07
HDAC1-205ENST00000472928 CCDC102AQ96A19 550 aa8.35□□□□□ -1.07
HDAC1-205ENST00000472928 ZNF496Q96IT1 587 aaPredicted RBP8.35□□□□□ -1.07
HDAC1-205ENST00000472928 CAPNS2Q96L46 248 aa8.35□□□□□ -1.07
HDAC1-205ENST00000472928 DDX21Q9NR30 783 aaKnown RBP eCLIP8.35□□□□□ -1.07
HDAC1-205ENST00000472928 ABT1Q9ULW3 272 aaKnown RBP8.35□□□□□ -1.07
HDAC1-205ENST00000472928 ADAMTS8Q9UP79 889 aa8.35□□□□□ -1.07
HDAC1-205ENST00000472928 LTBP1Q14766 1721 aa8.34□□□□□ -1.07
HDAC1-205ENST00000472928 KLRG2A4D1S0 409 aaPredicted RBP8.34□□□□□ -1.07
HDAC1-205ENST00000472928 FZD9O00144 591 aa8.34□□□□□ -1.07
HDAC1-205ENST00000472928 IRF6O14896 467 aa8.34□□□□□ -1.07
HDAC1-205ENST00000472928 U2SURPO15042 1029 aaKnown RBP8.34□□□□□ -1.07
HDAC1-205ENST00000472928 DIAPH1O60610 1272 aaKnown RBP8.34□□□□□ -1.07
HDAC1-205ENST00000472928 IL6STP40189 918 aaPredicted RBP8.34□□□□□ -1.07
HDAC1-205ENST00000472928 CYP4F22Q6NT55 531 aa8.34□□□□□ -1.07
HDAC1-205ENST00000472928 PNMA8AQ86V59 439 aaPredicted RBP8.34□□□□□ -1.07
HDAC1-205ENST00000472928 CCDC146Q8IYE0 955 aa8.34□□□□□ -1.07
HDAC1-205ENST00000472928 MCOLN1Q9GZU1 580 aa8.34□□□□□ -1.07
HDAC1-205ENST00000472928 TSKSQ9UJT2 592 aa8.34□□□□□ -1.07
HDAC1-205ENST00000472928 NUDCQ9Y266 331 aa8.34□□□□□ -1.07
HDAC1-205ENST00000472928 SNED1Q8TER0 1413 aa8.34□□□□□ -1.07
HDAC1-205ENST00000472928 HEG1Q9ULI3 1381 aa8.34□□□□□ -1.07
HDAC1-205ENST00000472928 COL4A5P29400 1685 aa8.34□□□□□ -1.08
HDAC1-205ENST00000472928 CASP8AP2Q9UKL3 1982 aa8.33□□□□□ -1.08
HDAC1-205ENST00000472928 U2AF1L5P0DN76 240 aaPredicted RBP8.33□□□□□ -1.08
HDAC1-205ENST00000472928 FECHP22830 423 aa8.33□□□□□ -1.08
HDAC1-205ENST00000472928 ST5P78524 1137 aa8.33□□□□□ -1.08
HDAC1-205ENST00000472928 U2AF1Q01081 240 aaKnown RBP eCLIP8.33□□□□□ -1.08
HDAC1-205ENST00000472928 PTGDRQ13258 359 aa8.33□□□□□ -1.08
HDAC1-205ENST00000472928 MTHFSDQ2M296 383 aaKnown RBP8.33□□□□□ -1.08
HDAC1-205ENST00000472928 GPC2Q8N158 579 aa8.33□□□□□ -1.08
HDAC1-205ENST00000472928 SP7Q8TDD2 431 aaPredicted RBP8.33□□□□□ -1.08
HDAC1-205ENST00000472928 GPR101Q96P66 508 aaPredicted RBP8.33□□□□□ -1.08
HDAC1-205ENST00000472928 SETDB2Q96T68 719 aa8.33□□□□□ -1.08
HDAC1-205ENST00000472928 ZNF330Q9Y3S2 320 aaPredicted RBP8.33□□□□□ -1.08
HDAC1-205ENST00000472928 TRAF5O00463 557 aa8.32□□□□□ -1.08
HDAC1-205ENST00000472928 AOC2O75106 756 aa8.32□□□□□ -1.08
HDAC1-205ENST00000472928 A1BGP04217 495 aa8.32□□□□□ -1.08
HDAC1-205ENST00000472928 HMOX1P09601 288 aa8.32□□□□□ -1.08
HDAC1-205ENST00000472928 NPR1P16066 1061 aa8.32□□□□□ -1.08
HDAC1-205ENST00000472928 IARSP41252 1262 aaKnown RBP8.32□□□□□ -1.08
HDAC1-205ENST00000472928 ECE1P42892 770 aa8.32□□□□□ -1.08
HDAC1-205ENST00000472928 CST9Q5W186 159 aa8.32□□□□□ -1.08
HDAC1-205ENST00000472928 SYNE4Q8N205 404 aa8.32□□□□□ -1.08
HDAC1-205ENST00000472928 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.32□□□□□ -1.08
HDAC1-205ENST00000472928 DAXXQ9UER7 740 aaPredicted RBP8.32□□□□□ -1.08
HDAC1-205ENST00000472928 BCORQ6W2J9 1755 aa8.32□□□□□ -1.08
HDAC1-205ENST00000472928 EPS15P42566 896 aa8.31□□□□□ -1.08
HDAC1-205ENST00000472928 SCNN1DP51172 638 aa8.31□□□□□ -1.08
HDAC1-205ENST00000472928 GRM1Q13255 1194 aa8.31□□□□□ -1.08
HDAC1-205ENST00000472928 AMHR2Q16671 573 aa8.31□□□□□ -1.08
HDAC1-205ENST00000472928 ZNF790Q6PG37 636 aa8.31□□□□□ -1.08
HDAC1-205ENST00000472928 RTKN2Q8IZC4 609 aa8.31□□□□□ -1.08
HDAC1-205ENST00000472928 TTC5Q8N0Z6 440 aa8.31□□□□□ -1.08
HDAC1-205ENST00000472928 BEGAINQ9BUH8 593 aa8.31□□□□□ -1.08
HDAC1-205ENST00000472928 SALL2Q9Y467 1007 aaPredicted RBP8.31□□□□□ -1.08
HDAC1-205ENST00000472928 TLL2Q9Y6L7 1015 aa8.31□□□□□ -1.08
HDAC1-205ENST00000472928 MAPK8IP3Q9UPT6 1336 aa8.3□□□□□ -1.08
HDAC1-205ENST00000472928 NPHP1O15259 732 aa8.3□□□□□ -1.08
HDAC1-205ENST00000472928 MAP2K2P36507 400 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms