RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 LDHBP07195 334 aaKnown RBP8.19□□□□□ -1.1
PRPF40A-208ENST00000472760 RARAP10276 462 aa8.19□□□□□ -1.1
PRPF40A-208ENST00000472760 ZNF16P17020 682 aaPredicted RBP8.19□□□□□ -1.1
PRPF40A-208ENST00000472760 TARSP26639 723 aaKnown RBP8.19□□□□□ -1.1
PRPF40A-208ENST00000472760 VEGFBP49765 207 aa8.19□□□□□ -1.1
PRPF40A-208ENST00000472760 NEUROD1Q13562 356 aa8.19□□□□□ -1.1
PRPF40A-208ENST00000472760 GRIN2CQ14957 1233 aa8.19□□□□□ -1.1
PRPF40A-208ENST00000472760 SNX29Q8TEQ0 813 aa8.19□□□□□ -1.1
PRPF40A-208ENST00000472760 CSRNP1Q96S65 589 aa8.19□□□□□ -1.1
PRPF40A-208ENST00000472760 BCL11AQ9H165 835 aa8.19□□□□□ -1.1
PRPF40A-208ENST00000472760 ABI2Q9NYB9 513 aaPredicted RBP8.19□□□□□ -1.1
PRPF40A-208ENST00000472760 FOXD3Q9UJU5 478 aaPredicted RBP8.19□□□□□ -1.1
PRPF40A-208ENST00000472760 EIF1AYO14602 144 aaKnown RBP8.18□□□□□ -1.1
PRPF40A-208ENST00000472760 CPNE3O75131 537 aaKnown RBP8.18□□□□□ -1.1
PRPF40A-208ENST00000472760 CTBSQ01459 385 aa8.18□□□□□ -1.1
PRPF40A-208ENST00000472760 TAGLNQ01995 201 aaKnown RBP8.18□□□□□ -1.1
PRPF40A-208ENST00000472760 ENOX2Q16206 610 aaKnown RBP8.18□□□□□ -1.1
PRPF40A-208ENST00000472760 FAM182BQ5T319 152 aa8.18□□□□□ -1.1
PRPF40A-208ENST00000472760 BHMTQ93088 406 aa8.18□□□□□ -1.1
PRPF40A-208ENST00000472760 SLC30A3Q99726 388 aa8.18□□□□□ -1.1
PRPF40A-208ENST00000472760 DNAJC25Q9H1X3 360 aa8.18□□□□□ -1.1
PRPF40A-208ENST00000472760 EFCC1Q9HA90 598 aa8.18□□□□□ -1.1
PRPF40A-208ENST00000472760 HCN2Q9UL51 889 aa8.18□□□□□ -1.1
PRPF40A-208ENST00000472760 PRR12Q9ULL5 1215 aa8.18□□□□□ -1.1
PRPF40A-208ENST00000472760 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.18□□□□□ -1.1
PRPF40A-208ENST00000472760 NFKB1P19838 968 aa8.17□□□□□ -1.1
PRPF40A-208ENST00000472760 ALG1LQ6GMV1 187 aa8.17□□□□□ -1.1
PRPF40A-208ENST00000472760 NPAS3Q8IXF0 933 aa8.17□□□□□ -1.1
PRPF40A-208ENST00000472760 PMEPA1Q969W9 287 aa8.17□□□□□ -1.1
PRPF40A-208ENST00000472760 ZFYVE28Q9HCC9 887 aa8.17□□□□□ -1.1
PRPF40A-208ENST00000472760 PRPF40AO75400 957 aaKnown RBP8.16□□□□□ -1.1
PRPF40A-208ENST00000472760 BMP4P12644 408 aa8.16□□□□□ -1.1
PRPF40A-208ENST00000472760 CES1P23141 567 aa8.16□□□□□ -1.1
PRPF40A-208ENST00000472760 RAB44Q7Z6P3 723 aaPredicted RBP8.16□□□□□ -1.1
PRPF40A-208ENST00000472760 C1orf127Q8N9H9 656 aa8.16□□□□□ -1.1
PRPF40A-208ENST00000472760 CNTN3Q9P232 1028 aa8.16□□□□□ -1.1
PRPF40A-208ENST00000472760 WWC3Q9ULE0 1092 aa8.16□□□□□ -1.1
PRPF40A-208ENST00000472760 E9PSI1 815 aa8.15□□□□□ -1.1
PRPF40A-208ENST00000472760 MMP20O60882 483 aa8.15□□□□□ -1.1
PRPF40A-208ENST00000472760 MX2P20592 715 aa8.15□□□□□ -1.1
PRPF40A-208ENST00000472760 XPCQ01831 940 aaPredicted RBP8.15□□□□□ -1.1
PRPF40A-208ENST00000472760 ZFATQ9P243 1243 aa8.15□□□□□ -1.1
PRPF40A-208ENST00000472760 PHF20L1A8MW92 1017 aa8.14□□□□□ -1.11
PRPF40A-208ENST00000472760 H3BM21 787 aa8.14□□□□□ -1.11
PRPF40A-208ENST00000472760 PSAPP07602 524 aa8.14□□□□□ -1.11
PRPF40A-208ENST00000472760 USPL1Q5W0Q7 1092 aa8.14□□□□□ -1.11
PRPF40A-208ENST00000472760 SLC16A10Q8TF71 515 aa8.14□□□□□ -1.11
PRPF40A-208ENST00000472760 SETDB2Q96T68 719 aa8.14□□□□□ -1.11
PRPF40A-208ENST00000472760 DUSP9Q99956 384 aaKnown RBP8.14□□□□□ -1.11
PRPF40A-208ENST00000472760 UNCXA6NJT0 531 aa8.13□□□□□ -1.11
PRPF40A-208ENST00000472760 EREGO14944 169 aa8.13□□□□□ -1.11
PRPF40A-208ENST00000472760 MAP3K6O95382 1288 aa8.13□□□□□ -1.11
PRPF40A-208ENST00000472760 POLR3DP05423 398 aaPredicted RBP8.13□□□□□ -1.11
PRPF40A-208ENST00000472760 OR13H1Q8NG92 308 aa8.13□□□□□ -1.11
PRPF40A-208ENST00000472760 FBF1Q8TES7 1133 aa8.13□□□□□ -1.11
PRPF40A-208ENST00000472760 CCDC74AQ96AQ1 378 aa8.13□□□□□ -1.11
PRPF40A-208ENST00000472760 MRRFQ96E11 262 aaKnown RBP8.13□□□□□ -1.11
PRPF40A-208ENST00000472760 CHRDQ9H2X0 955 aa8.13□□□□□ -1.11
PRPF40A-208ENST00000472760 IGFLR1Q9H665 355 aa8.13□□□□□ -1.11
PRPF40A-208ENST00000472760 TLR7Q9NYK1 1049 aaKnown RBP8.13□□□□□ -1.11
PRPF40A-208ENST00000472760 NSFL1CQ9UNZ2 370 aaKnown RBP8.13□□□□□ -1.11
PRPF40A-208ENST00000472760 C2CD2LO14523 706 aa8.12□□□□□ -1.11
PRPF40A-208ENST00000472760 TERTO14746 1132 aaKnown RBP8.12□□□□□ -1.11
PRPF40A-208ENST00000472760 CYP2E1P05181 493 aaPredicted RBP8.12□□□□□ -1.11
PRPF40A-208ENST00000472760 DHX32Q7L7V1 743 aaKnown RBP8.12□□□□□ -1.11
PRPF40A-208ENST00000472760 GPR161Q8N6U8 529 aaKnown RBP8.12□□□□□ -1.11
PRPF40A-208ENST00000472760 NLRP2Q9NX02 1062 aa8.12□□□□□ -1.11
PRPF40A-208ENST00000472760 KANSL3Q9P2N6 904 aa8.12□□□□□ -1.11
PRPF40A-208ENST00000472760 PARP2Q9UGN5 583 aa8.12□□□□□ -1.11
PRPF40A-208ENST00000472760 ITGAEP38570 1179 aa8.11□□□□□ -1.11
PRPF40A-208ENST00000472760 RANGAP1P46060 587 aaPredicted RBP8.11□□□□□ -1.11
PRPF40A-208ENST00000472760 PLAURQ03405 335 aa8.11□□□□□ -1.11
PRPF40A-208ENST00000472760 TBC1D8BQ0IIM8 1120 aa8.11□□□□□ -1.11
PRPF40A-208ENST00000472760 GAS6Q14393 721 aa8.11□□□□□ -1.11
PRPF40A-208ENST00000472760 ZNF468Q5VIY5 522 aaPredicted RBP8.11□□□□□ -1.11
PRPF40A-208ENST00000472760 SYT9Q86SS6 491 aa8.11□□□□□ -1.11
PRPF40A-208ENST00000472760 MRS2Q9HD23 443 aa8.11□□□□□ -1.11
PRPF40A-208ENST00000472760 MBIPQ9NS73 344 aa8.11□□□□□ -1.11
PRPF40A-208ENST00000472760 EDN3P14138 238 aa8.1□□□□□ -1.11
PRPF40A-208ENST00000472760 SOX18P35713 384 aa8.1□□□□□ -1.11
PRPF40A-208ENST00000472760 MAP2K3P46734 347 aa8.1□□□□□ -1.11
PRPF40A-208ENST00000472760 PCBP4P57723 403 aaKnown RBP8.1□□□□□ -1.11
PRPF40A-208ENST00000472760 HYAL2Q12891 473 aa8.1□□□□□ -1.11
PRPF40A-208ENST00000472760 PSMD2Q13200 908 aa8.1□□□□□ -1.11
PRPF40A-208ENST00000472760 NCAPG2Q86XI2 1143 aa8.1□□□□□ -1.11
PRPF40A-208ENST00000472760 GALNT12Q8IXK2 581 aa8.1□□□□□ -1.11
PRPF40A-208ENST00000472760 FRMD6Q96NE9 622 aa8.1□□□□□ -1.11
PRPF40A-208ENST00000472760 UBE2OQ9C0C9 1292 aaKnown RBP8.1□□□□□ -1.11
PRPF40A-208ENST00000472760 GNA15P30679 374 aa8.09□□□□□ -1.11
PRPF40A-208ENST00000472760 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.09□□□□□ -1.11
PRPF40A-208ENST00000472760 EPS8L3Q8TE67 593 aaKnown RBP8.09□□□□□ -1.11
PRPF40A-208ENST00000472760 NSUN5Q96P11 429 aaKnown RBP8.09□□□□□ -1.11
PRPF40A-208ENST00000472760 COL25A1Q9BXS0 654 aaPredicted RBP8.09□□□□□ -1.11
PRPF40A-208ENST00000472760 NPHS2Q9NP85 383 aa8.09□□□□□ -1.11
PRPF40A-208ENST00000472760 AVENQ9NQS1 362 aaPredicted RBP8.09□□□□□ -1.11
PRPF40A-208ENST00000472760 RNF19AQ9NV58 838 aa8.09□□□□□ -1.11
PRPF40A-208ENST00000472760 SPG7Q9UQ90 795 aa8.09□□□□□ -1.11
PRPF40A-208ENST00000472760 SIN3BO75182 1162 aa8.08□□□□□ -1.12
PRPF40A-208ENST00000472760 GADD45BO75293 160 aaPredicted RBP8.08□□□□□ -1.12
PRPF40A-208ENST00000472760 VSIG8P0DPA2 414 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms