RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ANKRD18BA2A2Z9 1011 aa21.01■□□□□ 0.95
CCM2-205ENST00000472223 C2CD5Q86YS7 1000 aa21.01■□□□□ 0.95
CCM2-205ENST00000472223 TTLL11Q8NHH1 800 aa21.01■□□□□ 0.95
CCM2-205ENST00000472223 CD2APQ9Y5K6 639 aa21.01■□□□□ 0.95
CCM2-205ENST00000472223 DDX60Q8IY21 1712 aaKnown RBP21.01■□□□□ 0.95
CCM2-205ENST00000472223 SRGAP3O43295 1099 aa21■□□□□ 0.95
CCM2-205ENST00000472223 CSF1RP07333 972 aa21■□□□□ 0.95
CCM2-205ENST00000472223 TGFB2P61812 414 aa21■□□□□ 0.95
CCM2-205ENST00000472223 ATP8B2P98198 1209 aa21■□□□□ 0.95
CCM2-205ENST00000472223 RABL6Q3YEC7 729 aaPredicted RBP21■□□□□ 0.95
CCM2-205ENST00000472223 CCDC85AQ96PX6 553 aaPredicted RBP21■□□□□ 0.95
CCM2-205ENST00000472223 CDC5LQ99459 802 aaKnown RBP21■□□□□ 0.95
CCM2-205ENST00000472223 NPR1P16066 1061 aa20.99■□□□□ 0.95
CCM2-205ENST00000472223 ALDH1B1P30837 517 aa20.99■□□□□ 0.95
CCM2-205ENST00000472223 EPHA10Q5JZY3 1008 aa20.99■□□□□ 0.95
CCM2-205ENST00000472223 MASTLQ96GX5 879 aa20.99■□□□□ 0.95
CCM2-205ENST00000472223 KAZALD1Q96I82 304 aa20.99■□□□□ 0.95
CCM2-205ENST00000472223 TMX4Q9H1E5 349 aaPredicted RBP20.99■□□□□ 0.95
CCM2-205ENST00000472223 C10orf71Q711Q0 1435 aa20.98■□□□□ 0.95
CCM2-205ENST00000472223 ANKRD44Q8N8A2 993 aa20.98■□□□□ 0.95
CCM2-205ENST00000472223 ZNF622Q969S3 477 aaKnown RBP eCLIP20.98■□□□□ 0.95
CCM2-205ENST00000472223 KLRG2A4D1S0 409 aaPredicted RBP20.97■□□□□ 0.95
CCM2-205ENST00000472223 ITGA6P23229 1130 aa20.97■□□□□ 0.95
CCM2-205ENST00000472223 IGHMBP2P38935 993 aaKnown RBP20.97■□□□□ 0.95
CCM2-205ENST00000472223 MTX1Q13505 466 aa20.97■□□□□ 0.95
CCM2-205ENST00000472223 CRY2Q49AN0 593 aa20.97■□□□□ 0.95
CCM2-205ENST00000472223 CEP85Q6P2H3 762 aa20.97■□□□□ 0.95
CCM2-205ENST00000472223 GREM2Q9H772 168 aa20.97■□□□□ 0.95
CCM2-205ENST00000472223 SRGNP10124 158 aa20.96■□□□□ 0.95
CCM2-205ENST00000472223 FAM161AQ3B820 660 aa20.96■□□□□ 0.95
CCM2-205ENST00000472223 STYK1Q6J9G0 422 aa20.96■□□□□ 0.95
CCM2-205ENST00000472223 ANKRD18AQ8IVF6 992 aa20.96■□□□□ 0.95
CCM2-205ENST00000472223 CNKSR1Q969H4 720 aa20.96■□□□□ 0.95
CCM2-205ENST00000472223 MPHOSPH8Q99549 860 aa20.96■□□□□ 0.95
CCM2-205ENST00000472223 RWDD1Q9H446 243 aaPredicted RBP20.96■□□□□ 0.95
CCM2-205ENST00000472223 RTL9Q8NET4 1388 aa20.96■□□□□ 0.95
CCM2-205ENST00000472223 ANKRD31Q8N7Z5 1873 aa20.95■□□□□ 0.94
CCM2-205ENST00000472223 CRAMP1Q96RY5 1269 aa20.95■□□□□ 0.94
CCM2-205ENST00000472223 HOXA10P31260 410 aaPredicted RBP20.94■□□□□ 0.94
CCM2-205ENST00000472223 C3orf67Q6ZVT6 689 aa20.94■□□□□ 0.94
CCM2-205ENST00000472223 KIF13BQ9NQT8 1826 aa20.94■□□□□ 0.94
CCM2-205ENST00000472223 TNRC6CQ9HCJ0 1690 aaKnown RBP20.93■□□□□ 0.94
CCM2-205ENST00000472223 BBOX1O75936 387 aa20.93■□□□□ 0.94
CCM2-205ENST00000472223 GRAPQ13588 217 aa20.93■□□□□ 0.94
CCM2-205ENST00000472223 HSP90AB4PQ58FF6 505 aa20.93■□□□□ 0.94
CCM2-205ENST00000472223 TMC4Q7Z404 712 aa20.93■□□□□ 0.94
CCM2-205ENST00000472223 GRAPLQ8TC17 118 aaPredicted RBP20.93■□□□□ 0.94
CCM2-205ENST00000472223 SSH3Q8TE77 659 aa20.93■□□□□ 0.94
CCM2-205ENST00000472223 PCDHB15Q9Y5E8 787 aa20.93■□□□□ 0.94
CCM2-205ENST00000472223 A0A0G2JLW4 131 aa20.92■□□□□ 0.94
CCM2-205ENST00000472223 PNMA6EA0A0J9YXQ4 647 aa20.92■□□□□ 0.94
CCM2-205ENST00000472223 CHRNA5P30532 468 aa20.92■□□□□ 0.94
CCM2-205ENST00000472223 RPS8P62241 208 aaKnown RBP20.92■□□□□ 0.94
CCM2-205ENST00000472223 G3BP1Q13283 466 aaKnown RBP eCLIP20.92■□□□□ 0.94
CCM2-205ENST00000472223 OS9Q13438 667 aaPredicted RBP20.92■□□□□ 0.94
CCM2-205ENST00000472223 LDHAL6AQ6ZMR3 332 aa20.92■□□□□ 0.94
CCM2-205ENST00000472223 CNNM1Q9NRU3 951 aa20.92■□□□□ 0.94
CCM2-205ENST00000472223 PIM2Q9P1W9 311 aa20.92■□□□□ 0.94
CCM2-205ENST00000472223 DPEP1P16444 411 aa20.91■□□□□ 0.94
CCM2-205ENST00000472223 CCDC136Q96JN2 1154 aa20.91■□□□□ 0.94
CCM2-205ENST00000472223 FHDC1Q9C0D6 1143 aaPredicted RBP20.91■□□□□ 0.94
CCM2-205ENST00000472223 SEC31BQ9NQW1 1179 aa20.91■□□□□ 0.94
CCM2-205ENST00000472223 ZBTB47Q9UFB7 747 aaPredicted RBP20.91■□□□□ 0.94
CCM2-205ENST00000472223 SURF6O75683 361 aaKnown RBP20.9■□□□□ 0.94
CCM2-205ENST00000472223 POLA2Q14181 598 aa20.9■□□□□ 0.94
CCM2-205ENST00000472223 TTLL6Q8N841 843 aa20.9■□□□□ 0.94
CCM2-205ENST00000472223 FBXO3Q9UK99 471 aa20.9■□□□□ 0.94
CCM2-205ENST00000472223 HDAC1Q13547 482 aaPredicted RBP20.89■□□□□ 0.93
CCM2-205ENST00000472223 COPRSQ9NQ92 184 aa20.89■□□□□ 0.93
CCM2-205ENST00000472223 PPP4R2Q9NY27 417 aa20.89■□□□□ 0.93
CCM2-205ENST00000472223 PPEF1O14829 653 aaPredicted RBP20.88■□□□□ 0.93
CCM2-205ENST00000472223 ERC1Q8IUD2 1116 aa20.88■□□□□ 0.93
CCM2-205ENST00000472223 CELF1Q92879 486 aaKnown RBP20.88■□□□□ 0.93
CCM2-205ENST00000472223 ZNF594Q96JF6 807 aaPredicted RBP20.88■□□□□ 0.93
CCM2-205ENST00000472223 SIL1Q9H173 461 aa20.88■□□□□ 0.93
CCM2-205ENST00000472223 BSDC1Q9NW68 430 aaPredicted RBP20.88■□□□□ 0.93
CCM2-205ENST00000472223 RFX5P48382 616 aaPredicted RBP20.87■□□□□ 0.93
CCM2-205ENST00000472223 PTPN12Q05209 780 aaKnown RBP20.87■□□□□ 0.93
CCM2-205ENST00000472223 DALRD3Q5D0E6 543 aaKnown RBP20.87■□□□□ 0.93
CCM2-205ENST00000472223 SIRT2Q8IXJ6 389 aa20.87■□□□□ 0.93
CCM2-205ENST00000472223 EYA2O00167 538 aa20.86■□□□□ 0.93
CCM2-205ENST00000472223 CIAO1O76071 339 aa20.86■□□□□ 0.93
CCM2-205ENST00000472223 IL15P40933 162 aaPredicted RBP20.86■□□□□ 0.93
CCM2-205ENST00000472223 KLHDC4Q8TBB5 520 aa20.86■□□□□ 0.93
CCM2-205ENST00000472223 GCC1Q96CN9 775 aa20.86■□□□□ 0.93
CCM2-205ENST00000472223 SYT17Q9BSW7 474 aa20.86■□□□□ 0.93
CCM2-205ENST00000472223 COL11A2P13942 1736 aaPredicted RBP20.86■□□□□ 0.93
CCM2-205ENST00000472223 LRP5O75197 1615 aa20.86■□□□□ 0.93
CCM2-205ENST00000472223 DLEC1Q9Y238 1755 aa20.85■□□□□ 0.93
CCM2-205ENST00000472223 MROH5Q6ZUA9 1318 aa20.85■□□□□ 0.93
CCM2-205ENST00000472223 RAB11FIP3O75154 756 aa20.85■□□□□ 0.93
CCM2-205ENST00000472223 SOGA3Q5TF21 947 aa20.85■□□□□ 0.93
CCM2-205ENST00000472223 CC2D2BQ6DHV5 1058 aa20.85■□□□□ 0.93
CCM2-205ENST00000472223 PRPF40BQ6NWY9 871 aaKnown RBP20.85■□□□□ 0.93
CCM2-205ENST00000472223 ANKRD2Q9GZV1 360 aa20.85■□□□□ 0.93
CCM2-205ENST00000472223 PA2G4Q9UQ80 394 aaKnown RBP20.85■□□□□ 0.93
CCM2-205ENST00000472223 TAF1P21675 1872 aa20.84■□□□□ 0.93
CCM2-205ENST00000472223 GRIPAP1Q4V328 841 aa20.84■□□□□ 0.93
CCM2-205ENST00000472223 METTL24Q5JXM2 366 aa20.84■□□□□ 0.93
CCM2-205ENST00000472223 SP8Q8IXZ3 490 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms