RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 DDR1Q08345 913 aa23.6■■□□□ 1.37
SNX4-203ENST00000471751 ERFEQ4G0M1 354 aa23.6■■□□□ 1.37
SNX4-203ENST00000471751 CCDC152Q4G0S7 254 aa23.6■■□□□ 1.37
SNX4-203ENST00000471751 EPHA10Q5JZY3 1008 aa23.6■■□□□ 1.37
SNX4-203ENST00000471751 PRR5LQ6MZQ0 368 aa23.6■■□□□ 1.37
SNX4-203ENST00000471751 COPRSQ9NQ92 184 aa23.6■■□□□ 1.37
SNX4-203ENST00000471751 NOP58Q9Y2X3 529 aaKnown RBP23.6■■□□□ 1.37
SNX4-203ENST00000471751 CASZ1Q86V15 1759 aa23.6■■□□□ 1.37
SNX4-203ENST00000471751 SMC5Q8IY18 1101 aa23.59■■□□□ 1.37
SNX4-203ENST00000471751 BRIP1Q9BX63 1249 aa23.59■■□□□ 1.37
SNX4-203ENST00000471751 DDX60Q8IY21 1712 aaKnown RBP23.59■■□□□ 1.37
SNX4-203ENST00000471751 PNMA6EA0A0J9YXQ4 647 aa23.59■■□□□ 1.37
SNX4-203ENST00000471751 CCDC57Q2TAC2 916 aa23.59■■□□□ 1.37
SNX4-203ENST00000471751 RTL5Q5HYW3 569 aaPredicted RBP23.59■■□□□ 1.37
SNX4-203ENST00000471751 NUTM1Q86Y26 1132 aa23.59■■□□□ 1.37
SNX4-203ENST00000471751 JARID2Q92833 1246 aaPredicted RBP23.59■■□□□ 1.37
SNX4-203ENST00000471751 KDM2BQ8NHM5 1336 aa23.58■■□□□ 1.37
SNX4-203ENST00000471751 FAM177BA6PVY3 158 aa23.58■■□□□ 1.36
SNX4-203ENST00000471751 RAB11FIP3O75154 756 aa23.58■■□□□ 1.36
SNX4-203ENST00000471751 IGHDP01880 384 aa23.58■■□□□ 1.36
SNX4-203ENST00000471751 IFIT5Q13325 482 aaKnown RBP23.58■■□□□ 1.36
SNX4-203ENST00000471751 SYNE4Q8N205 404 aa23.58■■□□□ 1.36
SNX4-203ENST00000471751 HCLS1P14317 486 aaPredicted RBP23.57■■□□□ 1.36
SNX4-203ENST00000471751 KLHL34Q8N239 644 aa23.57■■□□□ 1.36
SNX4-203ENST00000471751 FHDC1Q9C0D6 1143 aaPredicted RBP23.57■■□□□ 1.36
SNX4-203ENST00000471751 ANKRD18BA2A2Z9 1011 aa23.56■■□□□ 1.36
SNX4-203ENST00000471751 PDE6BP35913 854 aa23.56■■□□□ 1.36
SNX4-203ENST00000471751 RFX5P48382 616 aaPredicted RBP23.56■■□□□ 1.36
SNX4-203ENST00000471751 CRY2Q49AN0 593 aa23.56■■□□□ 1.36
SNX4-203ENST00000471751 B4GALNT3Q6L9W6 998 aa23.56■■□□□ 1.36
SNX4-203ENST00000471751 ERC1Q8IUD2 1116 aa23.56■■□□□ 1.36
SNX4-203ENST00000471751 SGIP1Q9BQI5 828 aa23.56■■□□□ 1.36
SNX4-203ENST00000471751 POLD1P28340 1107 aa23.55■■□□□ 1.36
SNX4-203ENST00000471751 MSL1Q68DK7 614 aa23.55■■□□□ 1.36
SNX4-203ENST00000471751 CIAO1O76071 339 aa23.54■■□□□ 1.36
SNX4-203ENST00000471751 PTPN12Q05209 780 aaKnown RBP23.54■■□□□ 1.36
SNX4-203ENST00000471751 CDC5LQ99459 802 aaKnown RBP23.54■■□□□ 1.36
SNX4-203ENST00000471751 ABCC12Q96J65 1359 aa23.53■■□□□ 1.36
SNX4-203ENST00000471751 SURF6O75683 361 aaKnown RBP23.52■■□□□ 1.36
SNX4-203ENST00000471751 ITGA6P23229 1130 aa23.52■■□□□ 1.36
SNX4-203ENST00000471751 HOXA10P31260 410 aaPredicted RBP23.52■■□□□ 1.36
SNX4-203ENST00000471751 G3BP1Q13283 466 aaKnown RBP eCLIP23.52■■□□□ 1.36
SNX4-203ENST00000471751 SYT17Q9BSW7 474 aa23.52■■□□□ 1.36
SNX4-203ENST00000471751 CHMP3Q9Y3E7 222 aa23.52■■□□□ 1.36
SNX4-203ENST00000471751 GREM2Q9H772 168 aa23.51■■□□□ 1.35
SNX4-203ENST00000471751 DCAF8L1A6NGE4 600 aa23.5■■□□□ 1.35
SNX4-203ENST00000471751 FAM161AQ3B820 660 aa23.5■■□□□ 1.35
SNX4-203ENST00000471751 KIF1BPQ96EK5 621 aa23.5■■□□□ 1.35
SNX4-203ENST00000471751 IL15P40933 162 aaPredicted RBP23.49■■□□□ 1.35
SNX4-203ENST00000471751 DDX46Q7L014 1031 aaKnown RBP23.49■■□□□ 1.35
SNX4-203ENST00000471751 TMC4Q7Z404 712 aa23.49■■□□□ 1.35
SNX4-203ENST00000471751 CRAMP1Q96RY5 1269 aa23.49■■□□□ 1.35
SNX4-203ENST00000471751 ZBTB47Q9UFB7 747 aaPredicted RBP23.49■■□□□ 1.35
SNX4-203ENST00000471751 EYA2O00167 538 aa23.48■■□□□ 1.35
SNX4-203ENST00000471751 IGHMBP2P38935 993 aaKnown RBP23.48■■□□□ 1.35
SNX4-203ENST00000471751 TAF7LQ5H9L4 462 aa23.48■■□□□ 1.35
SNX4-203ENST00000471751 RBM17Q96I25 401 aaKnown RBP23.48■■□□□ 1.35
SNX4-203ENST00000471751 BBOX1O75936 387 aa23.47■■□□□ 1.35
SNX4-203ENST00000471751 ALDH1B1P30837 517 aa23.47■■□□□ 1.35
SNX4-203ENST00000471751 NUCB1Q02818 461 aa23.47■■□□□ 1.35
SNX4-203ENST00000471751 LRRCC1Q9C099 1032 aa23.47■■□□□ 1.35
SNX4-203ENST00000471751 BSDC1Q9NW68 430 aaPredicted RBP23.47■■□□□ 1.35
SNX4-203ENST00000471751 NPR1P16066 1061 aa23.46■■□□□ 1.35
SNX4-203ENST00000471751 RPS8P62241 208 aaKnown RBP23.46■■□□□ 1.35
SNX4-203ENST00000471751 LDHAL6AQ6ZMR3 332 aa23.46■■□□□ 1.35
SNX4-203ENST00000471751 ANKRD18AQ8IVF6 992 aa23.46■■□□□ 1.35
SNX4-203ENST00000471751 RPGRQ92834 1020 aaKnown RBP23.46■■□□□ 1.35
SNX4-203ENST00000471751 MPHOSPH8Q99549 860 aa23.46■■□□□ 1.35
SNX4-203ENST00000471751 ANKRD31Q8N7Z5 1873 aa23.45■■□□□ 1.34
SNX4-203ENST00000471751 SRGNP10124 158 aa23.45■■□□□ 1.34
SNX4-203ENST00000471751 MASTLQ96GX5 879 aa23.45■■□□□ 1.34
SNX4-203ENST00000471751 GPR108Q9NPR9 543 aa23.45■■□□□ 1.34
SNX4-203ENST00000471751 KIF13BQ9NQT8 1826 aa23.45■■□□□ 1.34
SNX4-203ENST00000471751 MROH5Q6ZUA9 1318 aa23.45■■□□□ 1.34
SNX4-203ENST00000471751 C10orf71Q711Q0 1435 aa23.44■■□□□ 1.34
SNX4-203ENST00000471751 H0YIN7 160 aa23.44■■□□□ 1.34
SNX4-203ENST00000471751 TGFB2P61812 414 aa23.44■■□□□ 1.34
SNX4-203ENST00000471751 GRAPQ13588 217 aa23.44■■□□□ 1.34
SNX4-203ENST00000471751 STYK1Q6J9G0 422 aa23.44■■□□□ 1.34
SNX4-203ENST00000471751 GRAPLQ8TC17 118 aaPredicted RBP23.44■■□□□ 1.34
SNX4-203ENST00000471751 RHPN1Q8TCX5 695 aa23.44■■□□□ 1.34
SNX4-203ENST00000471751 EXOC6BQ9Y2D4 811 aa23.44■■□□□ 1.34
SNX4-203ENST00000471751 RIPOR2Q9Y4F9 1068 aa23.44■■□□□ 1.34
SNX4-203ENST00000471751 OS9Q13438 667 aaPredicted RBP23.43■■□□□ 1.34
SNX4-203ENST00000471751 C3orf67Q6ZVT6 689 aa23.43■■□□□ 1.34
SNX4-203ENST00000471751 CHD1LQ86WJ1 897 aa23.43■■□□□ 1.34
SNX4-203ENST00000471751 ANKRD45Q5TZF3 282 aa23.42■■□□□ 1.34
SNX4-203ENST00000471751 ATG9AQ7Z3C6 839 aa23.42■■□□□ 1.34
SNX4-203ENST00000471751 PA2G4Q9UQ80 394 aaKnown RBP23.42■■□□□ 1.34
SNX4-203ENST00000471751 CD2APQ9Y5K6 639 aa23.42■■□□□ 1.34
SNX4-203ENST00000471751 TNRC6CQ9HCJ0 1690 aaKnown RBP23.42■■□□□ 1.34
SNX4-203ENST00000471751 CLASRPQ8N2M8 674 aaKnown RBP23.41■■□□□ 1.34
SNX4-203ENST00000471751 SEC31BQ9NQW1 1179 aa23.41■■□□□ 1.34
SNX4-203ENST00000471751 CNNM1Q9NRU3 951 aa23.41■■□□□ 1.34
SNX4-203ENST00000471751 CEP126Q9P2H0 1117 aa23.41■■□□□ 1.34
SNX4-203ENST00000471751 AKAP2Q9Y2D5 859 aa23.41■■□□□ 1.34
SNX4-203ENST00000471751 PELP1Q8IZL8 1130 aaKnown RBP23.4■■□□□ 1.34
SNX4-203ENST00000471751 CCDC24Q8N4L8 307 aa23.4■■□□□ 1.34
SNX4-203ENST00000471751 CNKSR1Q969H4 720 aa23.4■■□□□ 1.34
SNX4-203ENST00000471751 CCDC85AQ96PX6 553 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms